RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 CLSPNQ9HAW4 1339 aa24.35■■□□□ 1.49
RER1-202ENST00000378512 ALS2Q96Q42 1657 aa24.35■■□□□ 1.49
RER1-202ENST00000378512 CDK19Q9BWU1 502 aa24.34■■□□□ 1.49
RER1-202ENST00000378512 NUDT16Q96DE0 195 aaKnown RBP24.32■■□□□ 1.48
RER1-202ENST00000378512 FAM83GA6ND36 823 aa24.31■■□□□ 1.48
RER1-202ENST00000378512 NGDNQ8NEJ9 315 aaKnown RBP24.29■■□□□ 1.48
RER1-202ENST00000378512 NWD2Q9ULI1 1742 aa24.29■■□□□ 1.48
RER1-202ENST00000378512 POLR3AO14802 1390 aaPredicted RBP24.28■■□□□ 1.48
RER1-202ENST00000378512 CRYBG1Q9Y4K1 1723 aa24.28■■□□□ 1.48
RER1-202ENST00000378512 SBNO2Q9Y2G9 1366 aa24.28■■□□□ 1.48
RER1-202ENST00000378512 CCDC61Q9Y6R9 512 aa24.27■■□□□ 1.48
RER1-202ENST00000378512 BRWD3Q6RI45 1802 aa24.27■■□□□ 1.48
RER1-202ENST00000378512 PAK3O75914 559 aaPredicted RBP24.27■■□□□ 1.48
RER1-202ENST00000378512 VPS72Q15906 364 aa24.27■■□□□ 1.48
RER1-202ENST00000378512 NRAPQ86VF7 1730 aa24.26■■□□□ 1.47
RER1-202ENST00000378512 PLEKHG3A1L390 1219 aa24.26■■□□□ 1.47
RER1-202ENST00000378512 TIMELESSQ9UNS1 1208 aa24.24■■□□□ 1.47
RER1-202ENST00000378512 CCDC9Q9Y3X0 531 aaKnown RBP24.24■■□□□ 1.47
RER1-202ENST00000378512 SEPT12Q8IYM1 358 aa24.23■■□□□ 1.47
RER1-202ENST00000378512 CARD11Q9BXL7 1154 aa24.22■■□□□ 1.47
RER1-202ENST00000378512 BTG4Q9NY30 223 aa24.22■■□□□ 1.47
RER1-202ENST00000378512 COL14A1Q05707 1796 aaKnown RBP24.2■■□□□ 1.47
RER1-202ENST00000378512 NUTM2GQ5VZR2 741 aa24.2■■□□□ 1.46
RER1-202ENST00000378512 EVC2Q86UK5 1308 aa24.2■■□□□ 1.46
RER1-202ENST00000378512 PPIP5K1Q6PFW1 1433 aa24.2■■□□□ 1.46
RER1-202ENST00000378512 SRPK2P78362 688 aaKnown RBP24.19■■□□□ 1.46
RER1-202ENST00000378512 CABP2Q9NPB3 220 aa24.19■■□□□ 1.46
RER1-202ENST00000378512 ACEP12821 1306 aa24.19■■□□□ 1.46
RER1-202ENST00000378512 PHRF1Q9P1Y6 1649 aaKnown RBP24.18■■□□□ 1.46
RER1-202ENST00000378512 ONECUT3O60422 494 aaPredicted RBP24.17■■□□□ 1.46
RER1-202ENST00000378512 AKAP12Q02952 1782 aa24.15■■□□□ 1.46
RER1-202ENST00000378512 FAM98CQ17RN3 349 aaKnown RBP24.15■■□□□ 1.46
RER1-202ENST00000378512 KIAA0232Q92628 1395 aa24.14■■□□□ 1.46
RER1-202ENST00000378512 CHRNA2Q15822 529 aa24.14■■□□□ 1.45
RER1-202ENST00000378512 PRDM11Q9NQV5 511 aa24.14■■□□□ 1.45
RER1-202ENST00000378512 BRD4O60885 1362 aaPredicted RBP24.14■■□□□ 1.45
RER1-202ENST00000378512 A0A0G2JS52 829 aa24.11■■□□□ 1.45
RER1-202ENST00000378512 ZC3H6P61129 1189 aaKnown RBP24.11■■□□□ 1.45
RER1-202ENST00000378512 MYT1Q01538 1121 aa24.11■■□□□ 1.45
RER1-202ENST00000378512 KRT27Q7Z3Y8 459 aa24.11■■□□□ 1.45
RER1-202ENST00000378512 CCDC125Q86Z20 511 aa24.11■■□□□ 1.45
RER1-202ENST00000378512 CABP1Q9NZU7 370 aa24.11■■□□□ 1.45
RER1-202ENST00000378512 BLMP54132 1417 aaPredicted RBP24.11■■□□□ 1.45
RER1-202ENST00000378512 SSH2Q76I76 1423 aa24.1■■□□□ 1.45
RER1-202ENST00000378512 DEFB132Q7Z7B7 95 aa24.1■■□□□ 1.45
RER1-202ENST00000378512 SPATA31A5Q5VU36 1347 aa24.1■■□□□ 1.45
RER1-202ENST00000378512 SPATA31A7Q8IWB4 1347 aa24.1■■□□□ 1.45
RER1-202ENST00000378512 USP6P35125 1406 aa24.1■■□□□ 1.45
RER1-202ENST00000378512 SRCAPQ6ZRS2 3230 aa24.09■■□□□ 1.45
RER1-202ENST00000378512 NRKQ7Z2Y5 1582 aa24.09■■□□□ 1.45
RER1-202ENST00000378512 TESK2Q96S53 571 aa24.09■■□□□ 1.45
RER1-202ENST00000378512 FAM182BQ5T319 152 aa24.08■■□□□ 1.44
RER1-202ENST00000378512 PUS7Q96PZ0 661 aaKnown RBP24.08■■□□□ 1.44
RER1-202ENST00000378512 CPSF1Q10570 1443 aaKnown RBP24.07■■□□□ 1.44
RER1-202ENST00000378512 MON2Q7Z3U7 1717 aa24.07■■□□□ 1.44
RER1-202ENST00000378512 ABTB2Q8N961 1025 aa24.06■■□□□ 1.44
RER1-202ENST00000378512 STRN4Q9NRL3 753 aa24.06■■□□□ 1.44
RER1-202ENST00000378512 THSD7AQ9UPZ6 1657 aa24.06■■□□□ 1.44
RER1-202ENST00000378512 PIK3C2AO00443 1686 aa24.04■■□□□ 1.44
RER1-202ENST00000378512 ST20-MTHFSA0A0A6YYL1 179 aa24.04■■□□□ 1.44
RER1-202ENST00000378512 CCER1Q8TC90 406 aaPredicted RBP24.04■■□□□ 1.44
RER1-202ENST00000378512 ZRANB1Q9UGI0 708 aa24.04■■□□□ 1.44
RER1-202ENST00000378512 CD163L1Q9NR16 1453 aa24.03■■□□□ 1.44
RER1-202ENST00000378512 USP19O94966 1318 aa24.03■■□□□ 1.44
RER1-202ENST00000378512 USP47Q96K76 1375 aa24.03■■□□□ 1.44
RER1-202ENST00000378512 ZNF692Q9BU19 519 aaPredicted RBP24.02■■□□□ 1.44
RER1-202ENST00000378512 CAMTA1Q9Y6Y1 1673 aa24.02■■□□□ 1.44
RER1-202ENST00000378512 SPATA31A1Q5TZJ5 1347 aa24.02■■□□□ 1.44
RER1-202ENST00000378512 SLC24A1O60721 1099 aa24.01■■□□□ 1.43
RER1-202ENST00000378512 LMO7Q8WWI1 1683 aa24■■□□□ 1.43
RER1-202ENST00000378512 SLIT3O75094 1523 aa23.99■■□□□ 1.43
RER1-202ENST00000378512 USP35Q9P2H5 1018 aa23.99■■□□□ 1.43
RER1-202ENST00000378512 USP54Q70EL1 1684 aa23.99■■□□□ 1.43
RER1-202ENST00000378512 SF3B2Q13435 895 aaKnown RBP23.98■■□□□ 1.43
RER1-202ENST00000378512 GCP02774 474 aa23.97■■□□□ 1.43
RER1-202ENST00000378512 LARP1Q6PKG0 1096 aaKnown RBP23.97■■□□□ 1.43
RER1-202ENST00000378512 CPDO75976 1380 aa23.97■■□□□ 1.43
RER1-202ENST00000378512 NLRP13Q86W25 1043 aa23.96■■□□□ 1.43
RER1-202ENST00000378512 TTC21BQ7Z4L5 1316 aa23.95■■□□□ 1.42
RER1-202ENST00000378512 NINLQ9Y2I6 1382 aa23.94■■□□□ 1.42
RER1-202ENST00000378512 TTC21AQ8NDW8 1320 aa23.94■■□□□ 1.42
RER1-202ENST00000378512 EVA1CP58658 441 aa23.94■■□□□ 1.42
RER1-202ENST00000378512 KTN1Q86UP2 1357 aaKnown RBP23.94■■□□□ 1.42
RER1-202ENST00000378512 ZBTB7CA1YPR0 619 aa23.93■■□□□ 1.42
RER1-202ENST00000378512 NLRP6P59044 892 aa23.93■■□□□ 1.42
RER1-202ENST00000378512 SLC12A5Q9H2X9 1139 aa23.92■■□□□ 1.42
RER1-202ENST00000378512 RGPD1P0DJD0 1748 aa23.91■■□□□ 1.42
RER1-202ENST00000378512 TNS1Q9HBL0 1735 aaKnown RBP23.91■■□□□ 1.42
RER1-202ENST00000378512 COL5A2P05997 1499 aaPredicted RBP23.91■■□□□ 1.42
RER1-202ENST00000378512 EN1Q05925 392 aaPredicted RBP23.9■■□□□ 1.42
RER1-202ENST00000378512 COL18A1P39060 1754 aa23.9■■□□□ 1.42
RER1-202ENST00000378512 A0A1W2PP64 1363 aa23.89■■□□□ 1.42
RER1-202ENST00000378512 EDC4Q6P2E9 1401 aaKnown RBP23.89■■□□□ 1.41
RER1-202ENST00000378512 BAG6P46379 1132 aa23.88■■□□□ 1.41
RER1-202ENST00000378512 TMF1P82094 1093 aa23.88■■□□□ 1.41
RER1-202ENST00000378512 USP31Q70CQ4 1352 aa23.88■■□□□ 1.41
RER1-202ENST00000378512 BARGINQ6ZT62 677 aa23.87■■□□□ 1.41
RER1-202ENST00000378512 MYOM1P52179 1685 aa23.86■■□□□ 1.41
RER1-202ENST00000378512 TMC1Q8TDI8 760 aa23.86■■□□□ 1.41
RER1-202ENST00000378512 NFAT5O94916 1531 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms