RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 USP6P35125 1406 aa16.25■□□□□ 0.19
DEPDC4-202ENST00000378244 TNS3Q68CZ2 1445 aa16.24■□□□□ 0.19
DEPDC4-202ENST00000378244 ADAMTS2O95450 1211 aa16.24■□□□□ 0.19
DEPDC4-202ENST00000378244 HAP1P54257 671 aaPredicted RBP16.24■□□□□ 0.19
DEPDC4-202ENST00000378244 CPSF1Q10570 1443 aaKnown RBP16.24■□□□□ 0.19
DEPDC4-202ENST00000378244 SBNO1A3KN83 1393 aa16.23■□□□□ 0.19
DEPDC4-202ENST00000378244 CD163L1Q9NR16 1453 aa16.23■□□□□ 0.19
DEPDC4-202ENST00000378244 WASHC2AQ641Q2 1341 aa16.23■□□□□ 0.19
DEPDC4-202ENST00000378244 TTC21BQ7Z4L5 1316 aa16.22■□□□□ 0.19
DEPDC4-202ENST00000378244 NLRP6P59044 892 aa16.22■□□□□ 0.19
DEPDC4-202ENST00000378244 NINLQ9Y2I6 1382 aa16.21■□□□□ 0.18
DEPDC4-202ENST00000378244 SOX12O15370 315 aa16.2■□□□□ 0.18
DEPDC4-202ENST00000378244 NME9Q86XW9 330 aa16.2■□□□□ 0.18
DEPDC4-202ENST00000378244 ZRANB1Q9UGI0 708 aa16.2■□□□□ 0.18
DEPDC4-202ENST00000378244 ARHGEF10O15013 1369 aa16.2■□□□□ 0.18
DEPDC4-202ENST00000378244 SPATA31A6Q5VVP1 1343 aa16.2■□□□□ 0.18
DEPDC4-202ENST00000378244 MEX3CQ5U5Q3 659 aaKnown RBP16.2■□□□□ 0.18
DEPDC4-202ENST00000378244 PANK3Q9H999 370 aa16.2■□□□□ 0.18
DEPDC4-202ENST00000378244 ANKRD36BQ8N2N9 1353 aa16.2■□□□□ 0.18
DEPDC4-202ENST00000378244 CARD14Q9BXL6 1004 aa16.19■□□□□ 0.18
DEPDC4-202ENST00000378244 CCDC7Q96M83 1385 aa16.19■□□□□ 0.18
DEPDC4-202ENST00000378244 SSH2Q76I76 1423 aa16.18■□□□□ 0.18
DEPDC4-202ENST00000378244 TRPM3Q9HCF6 1732 aaPredicted RBP16.18■□□□□ 0.18
DEPDC4-202ENST00000378244 NLRP13Q86W25 1043 aa16.17■□□□□ 0.18
DEPDC4-202ENST00000378244 C8orf37Q96NL8 207 aa16.17■□□□□ 0.18
DEPDC4-202ENST00000378244 LRP6O75581 1613 aa16.17■□□□□ 0.18
DEPDC4-202ENST00000378244 CNGB1Q14028 1251 aaPredicted RBP16.17■□□□□ 0.18
DEPDC4-202ENST00000378244 ZC3H6P61129 1189 aaKnown RBP16.16■□□□□ 0.18
DEPDC4-202ENST00000378244 EDC4Q6P2E9 1401 aaKnown RBP16.16■□□□□ 0.18
DEPDC4-202ENST00000378244 ZBTB7CA1YPR0 619 aa16.16■□□□□ 0.18
DEPDC4-202ENST00000378244 GGNBP2Q9H3C7 697 aa16.16■□□□□ 0.18
DEPDC4-202ENST00000378244 MYOM1P52179 1685 aa16.15■□□□□ 0.18
DEPDC4-202ENST00000378244 SHPRHQ149N8 1683 aa16.15■□□□□ 0.18
DEPDC4-202ENST00000378244 TTC21AQ8NDW8 1320 aa16.15■□□□□ 0.18
DEPDC4-202ENST00000378244 NSD3Q9BZ95 1437 aa16.14■□□□□ 0.17
DEPDC4-202ENST00000378244 AKAP12Q02952 1782 aa16.14■□□□□ 0.17
DEPDC4-202ENST00000378244 NGLY1Q96IV0 654 aa16.14■□□□□ 0.17
DEPDC4-202ENST00000378244 PHF23Q9BUL5 403 aaPredicted RBP16.14■□□□□ 0.17
DEPDC4-202ENST00000378244 ALS2Q96Q42 1657 aa16.14■□□□□ 0.17
DEPDC4-202ENST00000378244 BRD4O60885 1362 aaPredicted RBP16.13■□□□□ 0.17
DEPDC4-202ENST00000378244 FYB1O15117 783 aa16.13■□□□□ 0.17
DEPDC4-202ENST00000378244 GCP02774 474 aa16.13■□□□□ 0.17
DEPDC4-202ENST00000378244 MON2Q7Z3U7 1717 aa16.12■□□□□ 0.17
DEPDC4-202ENST00000378244 FBLN1P23142 703 aa16.12■□□□□ 0.17
DEPDC4-202ENST00000378244 CHRNA2Q15822 529 aa16.11■□□□□ 0.17
DEPDC4-202ENST00000378244 MED1Q15648 1581 aaPredicted RBP16.11■□□□□ 0.17
DEPDC4-202ENST00000378244 COG3Q96JB2 828 aa16.11■□□□□ 0.17
DEPDC4-202ENST00000378244 KNSTRNQ9Y448 316 aa16.11■□□□□ 0.17
DEPDC4-202ENST00000378244 NRKQ7Z2Y5 1582 aa16.11■□□□□ 0.17
DEPDC4-202ENST00000378244 PIK3C2AO00443 1686 aa16.1■□□□□ 0.17
DEPDC4-202ENST00000378244 COL22A1Q8NFW1 1626 aaPredicted RBP16.1■□□□□ 0.17
DEPDC4-202ENST00000378244 PRDM11Q9NQV5 511 aa16.1■□□□□ 0.17
DEPDC4-202ENST00000378244 FAM83GA6ND36 823 aa16.1■□□□□ 0.17
DEPDC4-202ENST00000378244 CGNL1Q0VF96 1302 aa16.09■□□□□ 0.17
DEPDC4-202ENST00000378244 KIAA0232Q92628 1395 aa16.09■□□□□ 0.17
DEPDC4-202ENST00000378244 TNNT2P45379 298 aaPredicted RBP16.09■□□□□ 0.17
DEPDC4-202ENST00000378244 DDX10Q13206 875 aaKnown RBP16.09■□□□□ 0.17
DEPDC4-202ENST00000378244 USP19O94966 1318 aa16.09■□□□□ 0.17
DEPDC4-202ENST00000378244 AFF2P51816 1311 aa16.08■□□□□ 0.16
DEPDC4-202ENST00000378244 CC2D1BQ5T0F9 858 aaKnown RBP16.06■□□□□ 0.16
DEPDC4-202ENST00000378244 KCNH5Q8NCM2 988 aa16.06■□□□□ 0.16
DEPDC4-202ENST00000378244 PER1O15534 1290 aaPredicted RBP16.06■□□□□ 0.16
DEPDC4-202ENST00000378244 BTG4Q9NY30 223 aa16.06■□□□□ 0.16
DEPDC4-202ENST00000378244 RGS17Q9UGC6 210 aaPredicted RBP16.06■□□□□ 0.16
DEPDC4-202ENST00000378244 USP21Q9UK80 565 aa16.06■□□□□ 0.16
DEPDC4-202ENST00000378244 USP31Q70CQ4 1352 aa16.05■□□□□ 0.16
DEPDC4-202ENST00000378244 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
DEPDC4-202ENST00000378244 OVOS2A0A0J9YW53 1432 aa16.04■□□□□ 0.16
DEPDC4-202ENST00000378244 OVOS2Q6IE36 1432 aa16.04■□□□□ 0.16
DEPDC4-202ENST00000378244 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
DEPDC4-202ENST00000378244 ABCA3Q99758 1704 aa16.03■□□□□ 0.16
DEPDC4-202ENST00000378244 STRN4Q9NRL3 753 aa16.03■□□□□ 0.16
DEPDC4-202ENST00000378244 PHRF1Q9P1Y6 1649 aaKnown RBP16.03■□□□□ 0.16
DEPDC4-202ENST00000378244 AMER1Q5JTC6 1135 aaPredicted RBP16.02■□□□□ 0.16
DEPDC4-202ENST00000378244 ARHGEF25Q86VW2 580 aa16.02■□□□□ 0.16
DEPDC4-202ENST00000378244 FNBP4Q8N3X1 1017 aaPredicted RBP16.02■□□□□ 0.16
DEPDC4-202ENST00000378244 PPM1GO15355 546 aaPredicted RBP16.02■□□□□ 0.15
DEPDC4-202ENST00000378244 CRYBG1Q9Y4K1 1723 aa16.01■□□□□ 0.15
DEPDC4-202ENST00000378244 MORC1Q86VD1 984 aa16.01■□□□□ 0.15
DEPDC4-202ENST00000378244 AXIN2Q9Y2T1 843 aa16.01■□□□□ 0.15
DEPDC4-202ENST00000378244 CCDC9Q9Y3X0 531 aaKnown RBP16.01■□□□□ 0.15
DEPDC4-202ENST00000378244 SLIT3O75094 1523 aa16.01■□□□□ 0.15
DEPDC4-202ENST00000378244 POTEAQ6S8J7 498 aa16.01■□□□□ 0.15
DEPDC4-202ENST00000378244 MARF1Q9Y4F3 1742 aaKnown RBP16■□□□□ 0.15
DEPDC4-202ENST00000378244 ZNF772Q68DY9 489 aaPredicted RBP16■□□□□ 0.15
DEPDC4-202ENST00000378244 QTRT2Q9H974 415 aaKnown RBP16■□□□□ 0.15
DEPDC4-202ENST00000378244 EVA1CP58658 441 aa16■□□□□ 0.15
DEPDC4-202ENST00000378244 MAP3K19Q56UN5 1328 aa15.99■□□□□ 0.15
DEPDC4-202ENST00000378244 CPDO75976 1380 aa15.99■□□□□ 0.15
DEPDC4-202ENST00000378244 UNC5CLQ8IV45 518 aa15.99■□□□□ 0.15
DEPDC4-202ENST00000378244 USP35Q9P2H5 1018 aa15.99■□□□□ 0.15
DEPDC4-202ENST00000378244 BCL9LQ86UU0 1499 aa15.99■□□□□ 0.15
DEPDC4-202ENST00000378244 AMPHP49418 695 aa15.99■□□□□ 0.15
DEPDC4-202ENST00000378244 EMILIN1Q9Y6C2 1016 aa15.99■□□□□ 0.15
DEPDC4-202ENST00000378244 NFAT5O94916 1531 aa15.98■□□□□ 0.15
DEPDC4-202ENST00000378244 LTV1Q96GA3 475 aaPredicted RBP15.97■□□□□ 0.15
DEPDC4-202ENST00000378244 SLIT2O94813 1529 aa15.97■□□□□ 0.15
DEPDC4-202ENST00000378244 KIF20BQ96Q89 1820 aa15.97■□□□□ 0.15
DEPDC4-202ENST00000378244 CAMTA1Q9Y6Y1 1673 aa15.96■□□□□ 0.15
DEPDC4-202ENST00000378244 CSB-PGBD3P0DP91 1061 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms