RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 HSP90AB2PQ58FF8 381 aa19.88■□□□□ 0.77
ATXN2-201ENST00000377617 NUP62CLQ9H1M0 184 aa19.88■□□□□ 0.77
ATXN2-201ENST00000377617 ADAMTS8Q9UP79 889 aa19.87■□□□□ 0.77
ATXN2-201ENST00000377617 NBPF1Q3BBV0 1214 aa19.87■□□□□ 0.77
ATXN2-201ENST00000377617 CCDC181Q5TID7 509 aa19.87■□□□□ 0.77
ATXN2-201ENST00000377617 EFCAB2Q5VUJ9 269 aa19.87■□□□□ 0.77
ATXN2-201ENST00000377617 ODF2Q5BJF6 829 aa19.87■□□□□ 0.77
ATXN2-201ENST00000377617 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
ATXN2-201ENST00000377617 EVC2Q86UK5 1308 aa19.87■□□□□ 0.77
ATXN2-201ENST00000377617 TRAK1Q9UPV9 953 aa19.87■□□□□ 0.77
ATXN2-201ENST00000377617 DHX16O60231 1041 aaKnown RBP19.86■□□□□ 0.77
ATXN2-201ENST00000377617 UACAQ9BZF9 1416 aa19.86■□□□□ 0.77
ATXN2-201ENST00000377617 PPP4R3BQ5MIZ7 849 aa19.86■□□□□ 0.77
ATXN2-201ENST00000377617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.86■□□□□ 0.77
ATXN2-201ENST00000377617 BRMS1Q9HCU9 246 aa19.86■□□□□ 0.77
ATXN2-201ENST00000377617 HIP1O00291 1037 aa19.85■□□□□ 0.77
ATXN2-201ENST00000377617 SYCE3A1L190 88 aa19.85■□□□□ 0.77
ATXN2-201ENST00000377617 FOSBP53539 338 aa19.85■□□□□ 0.77
ATXN2-201ENST00000377617 STK11IPQ8N1F8 1099 aa19.85■□□□□ 0.77
ATXN2-201ENST00000377617 ANKRD1Q15327 319 aa19.85■□□□□ 0.77
ATXN2-201ENST00000377617 MAGEC2Q9UBF1 373 aaPredicted RBP19.85■□□□□ 0.77
ATXN2-201ENST00000377617 EPS15P42566 896 aa19.85■□□□□ 0.77
ATXN2-201ENST00000377617 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
ATXN2-201ENST00000377617 C11orf95C9JLR9 678 aaPredicted RBP19.84■□□□□ 0.77
ATXN2-201ENST00000377617 DDX58O95786 925 aaKnown RBP19.84■□□□□ 0.77
ATXN2-201ENST00000377617 CCDC9Q9Y3X0 531 aaKnown RBP19.84■□□□□ 0.77
ATXN2-201ENST00000377617 MAP9Q49MG5 647 aa19.84■□□□□ 0.77
ATXN2-201ENST00000377617 MIA2Q96PC5 1412 aa19.84■□□□□ 0.77
ATXN2-201ENST00000377617 TEFQ10587 303 aa19.84■□□□□ 0.77
ATXN2-201ENST00000377617 FAM177A1Q8N128 213 aaPredicted RBP19.84■□□□□ 0.77
ATXN2-201ENST00000377617 GNAI3P08754 354 aa19.83■□□□□ 0.77
ATXN2-201ENST00000377617 COG3Q96JB2 828 aa19.83■□□□□ 0.77
ATXN2-201ENST00000377617 BMS1Q14692 1282 aaKnown RBP19.83■□□□□ 0.76
ATXN2-201ENST00000377617 MAP3K11Q16584 847 aa19.83■□□□□ 0.76
ATXN2-201ENST00000377617 CLASRPQ8N2M8 674 aaKnown RBP19.83■□□□□ 0.76
ATXN2-201ENST00000377617 GTPBP4Q9BZE4 634 aaKnown RBP19.83■□□□□ 0.76
ATXN2-201ENST00000377617 GPATCH11Q8N954 259 aa19.83■□□□□ 0.76
ATXN2-201ENST00000377617 NEMFO60524 1076 aa19.82■□□□□ 0.76
ATXN2-201ENST00000377617 MCM3P25205 808 aa19.82■□□□□ 0.76
ATXN2-201ENST00000377617 GTF2F1P35269 517 aaKnown RBP eCLIP19.82■□□□□ 0.769e-7■■■■□ 20.5
ATXN2-201ENST00000377617 MICALCLQ6ZW33 695 aa19.82■□□□□ 0.76
ATXN2-201ENST00000377617 ZSCAN12O43309 604 aa19.82■□□□□ 0.76
ATXN2-201ENST00000377617 AMOTL1Q8IY63 956 aa19.82■□□□□ 0.76
ATXN2-201ENST00000377617 SFPQP23246 707 aaKnown RBP eCLIP19.82■□□□□ 0.761e-6■□□□□ 10.6
ATXN2-201ENST00000377617 WWC1Q8IX03 1113 aa19.82■□□□□ 0.76
ATXN2-201ENST00000377617 UPF3BQ9BZI7 483 aaKnown RBP19.82■□□□□ 0.76
ATXN2-201ENST00000377617 SMTNL1A8MU46 457 aa19.81■□□□□ 0.76
ATXN2-201ENST00000377617 CFAP45Q9UL16 551 aa19.81■□□□□ 0.76
ATXN2-201ENST00000377617 CYP46A1Q9Y6A2 500 aa19.81■□□□□ 0.76
ATXN2-201ENST00000377617 BRPF1P55201 1214 aaPredicted RBP19.81■□□□□ 0.76
ATXN2-201ENST00000377617 STAC3Q96MF2 364 aa19.81■□□□□ 0.76
ATXN2-201ENST00000377617 NOL10Q9BSC4 688 aaKnown RBP19.81■□□□□ 0.76
ATXN2-201ENST00000377617 TMX4Q9H1E5 349 aaPredicted RBP19.81■□□□□ 0.76
ATXN2-201ENST00000377617 NEFHP12036 1026 aa19.8■□□□□ 0.76
ATXN2-201ENST00000377617 LARP1BQ659C4 914 aaKnown RBP19.8■□□□□ 0.76
ATXN2-201ENST00000377617 TRERF1Q96PN7 1200 aa19.8■□□□□ 0.76
ATXN2-201ENST00000377617 TNNT1P13805 278 aa19.8■□□□□ 0.76
ATXN2-201ENST00000377617 ME1P48163 572 aa19.8■□□□□ 0.76
ATXN2-201ENST00000377617 ARHGAP29Q52LW3 1261 aa19.8■□□□□ 0.76
ATXN2-201ENST00000377617 IPO4Q8TEX9 1081 aaKnown RBP19.8■□□□□ 0.76
ATXN2-201ENST00000377617 PNISRQ8TF01 805 aaKnown RBP19.8■□□□□ 0.76
ATXN2-201ENST00000377617 KRT222Q8N1A0 295 aa19.79■□□□□ 0.76
ATXN2-201ENST00000377617 NGDNQ8NEJ9 315 aaKnown RBP19.79■□□□□ 0.76
ATXN2-201ENST00000377617 ZSCAN31Q96LW9 406 aaPredicted RBP19.79■□□□□ 0.76
ATXN2-201ENST00000377617 UBTFL1P0CB47 393 aaPredicted RBP19.78■□□□□ 0.76
ATXN2-201ENST00000377617 FAM193AP78312 1265 aa19.78■□□□□ 0.76
ATXN2-201ENST00000377617 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
ATXN2-201ENST00000377617 TXLNAP40222 546 aa19.78■□□□□ 0.76
ATXN2-201ENST00000377617 SPATA32Q96LK8 384 aa19.78■□□□□ 0.76
ATXN2-201ENST00000377617 JAKMIP3Q5VZ66 844 aa19.78■□□□□ 0.76
ATXN2-201ENST00000377617 GTF2A1P52655 376 aaPredicted RBP19.78■□□□□ 0.76
ATXN2-201ENST00000377617 IRX3P78415 501 aaPredicted RBP19.78■□□□□ 0.76
ATXN2-201ENST00000377617 TCP11L2Q8N4U5 519 aa19.78■□□□□ 0.76
ATXN2-201ENST00000377617 ANKRD18AQ8IVF6 992 aa19.77■□□□□ 0.76
ATXN2-201ENST00000377617 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
ATXN2-201ENST00000377617 LRRFIP2Q9Y608 721 aaKnown RBP19.77■□□□□ 0.76
ATXN2-201ENST00000377617 KIF3BO15066 747 aa19.77■□□□□ 0.76
ATXN2-201ENST00000377617 CCDC183Q5T5S1 534 aa19.77■□□□□ 0.76
ATXN2-201ENST00000377617 CCDC148Q8NFR7 591 aa19.77■□□□□ 0.76
ATXN2-201ENST00000377617 CARMIL2Q6F5E8 1435 aa19.76■□□□□ 0.75
ATXN2-201ENST00000377617 POLR3GO15318 223 aaPredicted RBP19.76■□□□□ 0.75
ATXN2-201ENST00000377617 FSD1Q9BTV5 496 aa19.76■□□□□ 0.75
ATXN2-201ENST00000377617 ENOX2Q16206 610 aaKnown RBP19.76■□□□□ 0.75
ATXN2-201ENST00000377617 CTR9Q6PD62 1173 aa19.76■□□□□ 0.75
ATXN2-201ENST00000377617 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.76■□□□□ 0.753e-8■■□□□ 11.4
ATXN2-201ENST00000377617 EPB41L2O43491 1005 aaKnown RBP19.76■□□□□ 0.75
ATXN2-201ENST00000377617 EIF2S2P20042 333 aaKnown RBP19.76■□□□□ 0.75
ATXN2-201ENST00000377617 SEPT7Q16181 437 aaKnown RBP19.76■□□□□ 0.75
ATXN2-201ENST00000377617 POTEB2H3BUK9 544 aa19.75■□□□□ 0.75
ATXN2-201ENST00000377617 URI1O94763 535 aaPredicted RBP19.75■□□□□ 0.75
ATXN2-201ENST00000377617 EZRP15311 586 aaKnown RBP19.75■□□□□ 0.75
ATXN2-201ENST00000377617 TAX1BP1Q86VP1 789 aa19.75■□□□□ 0.75
ATXN2-201ENST00000377617 PAXBP1Q9Y5B6 917 aa19.75■□□□□ 0.75
ATXN2-201ENST00000377617 DNAAF4Q8WXU2 420 aa19.74■□□□□ 0.75
ATXN2-201ENST00000377617 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
ATXN2-201ENST00000377617 CEBPZQ03701 1054 aaKnown RBP19.74■□□□□ 0.75
ATXN2-201ENST00000377617 C1orf141Q5JVX7 400 aa19.74■□□□□ 0.75
ATXN2-201ENST00000377617 CHD1LQ86WJ1 897 aa19.74■□□□□ 0.75
ATXN2-201ENST00000377617 MNAT1P51948 309 aa19.74■□□□□ 0.75
ATXN2-201ENST00000377617 STIM1Q13586 685 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms