RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 POLR3AO14802 1390 aaPredicted RBP25.82■■□□□ 1.72
COMMD6-202ENST00000377612 NEUROD1Q13562 356 aa25.8■■□□□ 1.72
COMMD6-202ENST00000377612 CENPJQ9HC77 1338 aaPredicted RBP25.8■■□□□ 1.72
COMMD6-202ENST00000377612 UNC5CLQ8IV45 518 aa25.79■■□□□ 1.72
COMMD6-202ENST00000377612 NGDNQ8NEJ9 315 aaKnown RBP25.78■■□□□ 1.72
COMMD6-202ENST00000377612 GJD4Q96KN9 370 aaPredicted RBP25.77■■□□□ 1.72
COMMD6-202ENST00000377612 HAP1P54257 671 aaPredicted RBP25.76■■□□□ 1.71
COMMD6-202ENST00000377612 PPIP5K1Q6PFW1 1433 aa25.76■■□□□ 1.71
COMMD6-202ENST00000377612 PIK3C2AO00443 1686 aa25.76■■□□□ 1.71
COMMD6-202ENST00000377612 LMO7Q8WWI1 1683 aa25.74■■□□□ 1.71
COMMD6-202ENST00000377612 ATAD2Q6PL18 1390 aa25.74■■□□□ 1.71
COMMD6-202ENST00000377612 ACEP12821 1306 aa25.74■■□□□ 1.71
COMMD6-202ENST00000377612 ROCK2O75116 1388 aaKnown RBP25.73■■□□□ 1.71
COMMD6-202ENST00000377612 FAM83GA6ND36 823 aa25.73■■□□□ 1.71
COMMD6-202ENST00000377612 NBPF8Q3BBV2 869 aa25.73■■□□□ 1.71
COMMD6-202ENST00000377612 MON2Q7Z3U7 1717 aa25.73■■□□□ 1.71
COMMD6-202ENST00000377612 THSD7AQ9UPZ6 1657 aa25.72■■□□□ 1.71
COMMD6-202ENST00000377612 PLEKHG3A1L390 1219 aa25.71■■□□□ 1.71
COMMD6-202ENST00000377612 PAK3O75914 559 aaPredicted RBP25.71■■□□□ 1.71
COMMD6-202ENST00000377612 CCDC61Q9Y6R9 512 aa25.71■■□□□ 1.71
COMMD6-202ENST00000377612 CABP2Q9NPB3 220 aa25.7■■□□□ 1.7
COMMD6-202ENST00000377612 VPS72Q15906 364 aa25.69■■□□□ 1.7
COMMD6-202ENST00000377612 SRPK2P78362 688 aaKnown RBP25.67■■□□□ 1.7
COMMD6-202ENST00000377612 RGPD5Q99666 1765 aa25.65■■□□□ 1.7
COMMD6-202ENST00000377612 KIAA0232Q92628 1395 aa25.65■■□□□ 1.7
COMMD6-202ENST00000377612 USP6P35125 1406 aa25.64■■□□□ 1.7
COMMD6-202ENST00000377612 NUTM2GQ5VZR2 741 aa25.64■■□□□ 1.7
COMMD6-202ENST00000377612 SLIT3O75094 1523 aa25.63■■□□□ 1.69
COMMD6-202ENST00000377612 WNK3Q9BYP7 1800 aa25.63■■□□□ 1.69
COMMD6-202ENST00000377612 TRIM26Q12899 539 aaPredicted RBP25.63■■□□□ 1.69
COMMD6-202ENST00000377612 BTG4Q9NY30 223 aa25.63■■□□□ 1.69
COMMD6-202ENST00000377612 COL18A1P39060 1754 aa25.63■■□□□ 1.69
COMMD6-202ENST00000377612 SSH2Q76I76 1423 aa25.63■■□□□ 1.69
COMMD6-202ENST00000377612 USP19O94966 1318 aa25.62■■□□□ 1.69
COMMD6-202ENST00000377612 USP54Q70EL1 1684 aa25.61■■□□□ 1.69
COMMD6-202ENST00000377612 CAMTA1Q9Y6Y1 1673 aa25.61■■□□□ 1.69
COMMD6-202ENST00000377612 TNS1Q9HBL0 1735 aaKnown RBP25.6■■□□□ 1.69
COMMD6-202ENST00000377612 TONSLQ96HA7 1378 aa25.6■■□□□ 1.69
COMMD6-202ENST00000377612 SEPT12Q8IYM1 358 aa25.59■■□□□ 1.69
COMMD6-202ENST00000377612 SBNO2Q9Y2G9 1366 aa25.58■■□□□ 1.69
COMMD6-202ENST00000377612 RGPD1P0DJD0 1748 aa25.58■■□□□ 1.69
COMMD6-202ENST00000377612 CHRNA2Q15822 529 aa25.58■■□□□ 1.69
COMMD6-202ENST00000377612 PRDM11Q9NQV5 511 aa25.58■■□□□ 1.69
COMMD6-202ENST00000377612 CCDC9Q9Y3X0 531 aaKnown RBP25.58■■□□□ 1.69
COMMD6-202ENST00000377612 EVC2Q86UK5 1308 aa25.58■■□□□ 1.69
COMMD6-202ENST00000377612 ONECUT3O60422 494 aaPredicted RBP25.57■■□□□ 1.68
COMMD6-202ENST00000377612 CABP1Q9NZU7 370 aa25.57■■□□□ 1.68
COMMD6-202ENST00000377612 ZC3H6P61129 1189 aaKnown RBP25.55■■□□□ 1.68
COMMD6-202ENST00000377612 SPATA31A5Q5VU36 1347 aa25.55■■□□□ 1.68
COMMD6-202ENST00000377612 SPATA31A7Q8IWB4 1347 aa25.55■■□□□ 1.68
COMMD6-202ENST00000377612 BRD4O60885 1362 aaPredicted RBP25.55■■□□□ 1.68
COMMD6-202ENST00000377612 ABTB2Q8N961 1025 aa25.54■■□□□ 1.68
COMMD6-202ENST00000377612 CPDO75976 1380 aa25.54■■□□□ 1.68
COMMD6-202ENST00000377612 PARP4Q9UKK3 1724 aaKnown RBP25.53■■□□□ 1.68
COMMD6-202ENST00000377612 CD163L1Q9NR16 1453 aa25.53■■□□□ 1.68
COMMD6-202ENST00000377612 LTN1O94822 1766 aa25.52■■□□□ 1.68
COMMD6-202ENST00000377612 FAM98CQ17RN3 349 aaKnown RBP25.52■■□□□ 1.68
COMMD6-202ENST00000377612 BLMP54132 1417 aaPredicted RBP25.52■■□□□ 1.68
COMMD6-202ENST00000377612 CPSF1Q10570 1443 aaKnown RBP25.52■■□□□ 1.68
COMMD6-202ENST00000377612 NFAT5O94916 1531 aa25.5■■□□□ 1.67
COMMD6-202ENST00000377612 COL5A2P05997 1499 aaPredicted RBP25.5■■□□□ 1.67
COMMD6-202ENST00000377612 CARD11Q9BXL7 1154 aa25.5■■□□□ 1.67
COMMD6-202ENST00000377612 SPATA31A1Q5TZJ5 1347 aa25.48■■□□□ 1.67
COMMD6-202ENST00000377612 KRT27Q7Z3Y8 459 aa25.47■■□□□ 1.67
COMMD6-202ENST00000377612 LRRC37A3O60309 1634 aa25.47■■□□□ 1.67
COMMD6-202ENST00000377612 STRN4Q9NRL3 753 aa25.46■■□□□ 1.67
COMMD6-202ENST00000377612 GCP02774 474 aa25.45■■□□□ 1.66
COMMD6-202ENST00000377612 NLRP13Q86W25 1043 aa25.45■■□□□ 1.66
COMMD6-202ENST00000377612 A0A0G2JS52 829 aa25.44■■□□□ 1.66
COMMD6-202ENST00000377612 MYT1Q01538 1121 aa25.44■■□□□ 1.66
COMMD6-202ENST00000377612 SBF2Q86WG5 1849 aa25.44■■□□□ 1.66
COMMD6-202ENST00000377612 TTC21BQ7Z4L5 1316 aa25.43■■□□□ 1.66
COMMD6-202ENST00000377612 CCDC125Q86Z20 511 aa25.42■■□□□ 1.66
COMMD6-202ENST00000377612 PEAK1Q9H792 1746 aa25.42■■□□□ 1.66
COMMD6-202ENST00000377612 NLRP6P59044 892 aa25.41■■□□□ 1.66
COMMD6-202ENST00000377612 KTN1Q86UP2 1357 aaKnown RBP25.41■■□□□ 1.66
COMMD6-202ENST00000377612 FAM182BQ5T319 152 aa25.4■■□□□ 1.66
COMMD6-202ENST00000377612 LARP1Q6PKG0 1096 aaKnown RBP25.4■■□□□ 1.66
COMMD6-202ENST00000377612 DEFB132Q7Z7B7 95 aa25.4■■□□□ 1.66
COMMD6-202ENST00000377612 MYOM1P52179 1685 aa25.39■■□□□ 1.65
COMMD6-202ENST00000377612 RREB1Q92766 1687 aa25.38■■□□□ 1.65
COMMD6-202ENST00000377612 ABCC6O95255 1503 aa25.37■■□□□ 1.65
COMMD6-202ENST00000377612 AATKQ6ZMQ8 1374 aa25.37■■□□□ 1.65
COMMD6-202ENST00000377612 TESK2Q96S53 571 aa25.37■■□□□ 1.65
COMMD6-202ENST00000377612 TTC21AQ8NDW8 1320 aa25.37■■□□□ 1.65
COMMD6-202ENST00000377612 USP35Q9P2H5 1018 aa25.36■■□□□ 1.65
COMMD6-202ENST00000377612 CRB1P82279 1406 aa25.36■■□□□ 1.65
COMMD6-202ENST00000377612 ZNF692Q9BU19 519 aaPredicted RBP25.35■■□□□ 1.65
COMMD6-202ENST00000377612 A0A1W2PP64 1363 aa25.34■■□□□ 1.65
COMMD6-202ENST00000377612 KIF20BQ96Q89 1820 aa25.33■■□□□ 1.65
COMMD6-202ENST00000377612 ZBTB7CA1YPR0 619 aa25.33■■□□□ 1.65
COMMD6-202ENST00000377612 NUP188Q5SRE5 1749 aa25.33■■□□□ 1.65
COMMD6-202ENST00000377612 ZRANB1Q9UGI0 708 aa25.33■■□□□ 1.65
COMMD6-202ENST00000377612 EVA1CP58658 441 aa25.32■■□□□ 1.64
COMMD6-202ENST00000377612 BARGINQ6ZT62 677 aa25.32■■□□□ 1.64
COMMD6-202ENST00000377612 USP31Q70CQ4 1352 aa25.31■■□□□ 1.64
COMMD6-202ENST00000377612 EDC4Q6P2E9 1401 aaKnown RBP25.31■■□□□ 1.64
COMMD6-202ENST00000377612 ST20-MTHFSA0A0A6YYL1 179 aa25.31■■□□□ 1.64
COMMD6-202ENST00000377612 SLC12A5Q9H2X9 1139 aa25.31■■□□□ 1.64
COMMD6-202ENST00000377612 OVOS2A0A0J9YW53 1432 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms