RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TCOF1Q13428 1488 aaKnown RBP10.6□□□□□ -0.71
CRNKL1-202ENST00000377340 TTC21BQ7Z4L5 1316 aa10.6□□□□□ -0.71
CRNKL1-202ENST00000377340 DISP3Q9P2K9 1392 aa10.6□□□□□ -0.71
CRNKL1-202ENST00000377340 BTBD11A6QL63 1104 aa10.59□□□□□ -0.71
CRNKL1-202ENST00000377340 FYB1O15117 783 aa10.59□□□□□ -0.71
CRNKL1-202ENST00000377340 TWISTNBQ3B726 338 aaPredicted RBP10.59□□□□□ -0.71
CRNKL1-202ENST00000377340 TMEM2Q9UHN6 1383 aa10.59□□□□□ -0.71
CRNKL1-202ENST00000377340 SLC4A2P04920 1241 aa10.58□□□□□ -0.72
CRNKL1-202ENST00000377340 KIAA1211Q6ZU35 1233 aa10.58□□□□□ -0.72
CRNKL1-202ENST00000377340 ACSBG1Q96GR2 724 aa10.58□□□□□ -0.72
CRNKL1-202ENST00000377340 TMOD3Q9NYL9 352 aa10.58□□□□□ -0.72
CRNKL1-202ENST00000377340 NPATQ14207 1427 aa10.58□□□□□ -0.72
CRNKL1-202ENST00000377340 MBD5Q9P267 1494 aa10.58□□□□□ -0.72
CRNKL1-202ENST00000377340 BRD4O60885 1362 aaPredicted RBP10.58□□□□□ -0.72
CRNKL1-202ENST00000377340 FCHSD2O94868 740 aa10.58□□□□□ -0.72
CRNKL1-202ENST00000377340 GCP02774 474 aa10.58□□□□□ -0.72
CRNKL1-202ENST00000377340 VPS37DQ86XT2 251 aa10.58□□□□□ -0.72
CRNKL1-202ENST00000377340 ANKRD45Q5TZF3 282 aa10.57□□□□□ -0.72
CRNKL1-202ENST00000377340 API5Q9BZZ5 524 aaKnown RBP10.57□□□□□ -0.72
CRNKL1-202ENST00000377340 ZNF335Q9H4Z2 1342 aaPredicted RBP10.57□□□□□ -0.72
CRNKL1-202ENST00000377340 DZIP1LQ8IYY4 767 aaKnown RBP10.57□□□□□ -0.72
CRNKL1-202ENST00000377340 TOMM22Q9NS69 142 aa10.57□□□□□ -0.72
CRNKL1-202ENST00000377340 GNAT3A8MTJ3 354 aa10.57□□□□□ -0.72
CRNKL1-202ENST00000377340 PANK1Q8TE04 598 aa10.57□□□□□ -0.72
CRNKL1-202ENST00000377340 PNISRQ8TF01 805 aaKnown RBP10.57□□□□□ -0.72
CRNKL1-202ENST00000377340 ZCCHC11Q5TAX3 1644 aaKnown RBP10.57□□□□□ -0.72
CRNKL1-202ENST00000377340 ZBED9Q6R2W3 1325 aa10.57□□□□□ -0.72
CRNKL1-202ENST00000377340 HSP90AB1P08238 724 aaKnown RBP10.57□□□□□ -0.72
CRNKL1-202ENST00000377340 CCDC30Q5VVM6 783 aa10.57□□□□□ -0.72
CRNKL1-202ENST00000377340 EXOC6Q8TAG9 804 aa10.56□□□□□ -0.72
CRNKL1-202ENST00000377340 CCDC85AQ96PX6 553 aaPredicted RBP10.56□□□□□ -0.72
CRNKL1-202ENST00000377340 BTG4Q9NY30 223 aa10.56□□□□□ -0.72
CRNKL1-202ENST00000377340 PPIP5K1Q6PFW1 1433 aa10.56□□□□□ -0.72
CRNKL1-202ENST00000377340 SHANK2Q9UPX8 1470 aa10.56□□□□□ -0.72
CRNKL1-202ENST00000377340 KIF6Q6ZMV9 814 aa10.56□□□□□ -0.72
CRNKL1-202ENST00000377340 CRBNQ96SW2 442 aa10.56□□□□□ -0.72
CRNKL1-202ENST00000377340 TTC37Q6PGP7 1564 aa10.56□□□□□ -0.72
CRNKL1-202ENST00000377340 TMPOP42166 694 aaKnown RBP10.55□□□□□ -0.72
CRNKL1-202ENST00000377340 NEUROD6Q96NK8 337 aa10.55□□□□□ -0.72
CRNKL1-202ENST00000377340 BCL11BQ9C0K0 894 aaPredicted RBP10.55□□□□□ -0.72
CRNKL1-202ENST00000377340 MAPKBP1O60336 1514 aa10.55□□□□□ -0.72
CRNKL1-202ENST00000377340 GPATCH3Q96I76 525 aa10.55□□□□□ -0.72
CRNKL1-202ENST00000377340 RILPL2Q969X0 211 aa10.55□□□□□ -0.72
CRNKL1-202ENST00000377340 YTHDC2Q9H6S0 1430 aaKnown RBP10.54□□□□□ -0.72
CRNKL1-202ENST00000377340 NFE2L2Q16236 605 aa10.54□□□□□ -0.72
CRNKL1-202ENST00000377340 FAM83GA6ND36 823 aa10.53□□□□□ -0.72
CRNKL1-202ENST00000377340 DCAF8L1A6NGE4 600 aa10.53□□□□□ -0.72
CRNKL1-202ENST00000377340 G3BP1Q13283 466 aaKnown RBP eCLIP10.53□□□□□ -0.723e-6■■■■□ 22.7
CRNKL1-202ENST00000377340 SPRYD3Q8NCJ5 442 aa10.53□□□□□ -0.72
CRNKL1-202ENST00000377340 TMEM94Q12767 1356 aa10.53□□□□□ -0.72
CRNKL1-202ENST00000377340 CFAP43Q8NDM7 1665 aa10.53□□□□□ -0.72
CRNKL1-202ENST00000377340 DDB1Q16531 1140 aa10.53□□□□□ -0.72
CRNKL1-202ENST00000377340 PRAG1Q86YV5 1406 aa10.53□□□□□ -0.72
CRNKL1-202ENST00000377340 UBTFL1P0CB47 393 aaPredicted RBP10.53□□□□□ -0.72
CRNKL1-202ENST00000377340 BECN1Q14457 450 aa10.53□□□□□ -0.72
CRNKL1-202ENST00000377340 AEBP1Q8IUX7 1158 aa10.53□□□□□ -0.72
CRNKL1-202ENST00000377340 PZPP20742 1482 aa10.53□□□□□ -0.72
CRNKL1-202ENST00000377340 TESK2Q96S53 571 aa10.53□□□□□ -0.72
CRNKL1-202ENST00000377340 RRP1P56182 461 aaKnown RBP10.52□□□□□ -0.73
CRNKL1-202ENST00000377340 NBR1Q14596 966 aa10.52□□□□□ -0.73
CRNKL1-202ENST00000377340 DNMT1P26358 1616 aaKnown RBP10.52□□□□□ -0.73
CRNKL1-202ENST00000377340 STARD3NLO95772 234 aa10.52□□□□□ -0.73
CRNKL1-202ENST00000377340 AMOTQ4VCS5 1084 aa10.52□□□□□ -0.73
CRNKL1-202ENST00000377340 WWC3Q9ULE0 1092 aa10.52□□□□□ -0.73
CRNKL1-202ENST00000377340 ARHGEF12Q9NZN5 1544 aa10.52□□□□□ -0.73
CRNKL1-202ENST00000377340 MYO5CQ9NQX4 1742 aa10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 BCAR3O75815 825 aa10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 DDX19BQ9UMR2 479 aa10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 KIF16BQ96L93 1317 aa10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 RIMBP3CA6NJZ7 1639 aa10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 RIMBP3BA6NNM3 1639 aa10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 RIMBP3Q9UFD9 1639 aa10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 PHF14O94880 888 aa10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 IFNL2Q8IZJ0 200 aa10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 C1orf115Q9H7X2 142 aa10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 KDM6BO15054 1643 aa10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 MLH3Q9UHC1 1453 aa10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 ZCRB1Q8TBF4 217 aaKnown RBP10.51□□□□□ -0.73
CRNKL1-202ENST00000377340 IFIT2P09913 472 aaKnown RBP10.5□□□□□ -0.73
CRNKL1-202ENST00000377340 SLC39A6Q13433 755 aa10.5□□□□□ -0.73
CRNKL1-202ENST00000377340 CARD14Q9BXL6 1004 aa10.5□□□□□ -0.73
CRNKL1-202ENST00000377340 TTC21AQ8NDW8 1320 aa10.5□□□□□ -0.73
CRNKL1-202ENST00000377340 RAD21O60216 631 aa10.5□□□□□ -0.73
CRNKL1-202ENST00000377340 TAF7Q15545 349 aaPredicted RBP10.5□□□□□ -0.73
CRNKL1-202ENST00000377340 PLEKHH1Q9ULM0 1364 aa10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 ANXA1P04083 346 aa10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 MCCP23508 829 aa10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 MFAP1P55081 439 aaKnown RBP10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 NOL8Q76FK4 1167 aaKnown RBP10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 POLKQ9UBT6 870 aa10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 SURF6O75683 361 aaKnown RBP10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 FAM98CQ17RN3 349 aaKnown RBP10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 DUSP27Q5VZP5 1158 aa10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 WWC1Q8IX03 1113 aa10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 SAMD9LQ8IVG5 1584 aa10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 ZPR1O75312 459 aa10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 NCLP19338 710 aaKnown RBP10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 SIL1Q9H173 461 aa10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 ZNF219Q9P2Y4 722 aaPredicted RBP10.49□□□□□ -0.73
CRNKL1-202ENST00000377340 METP08581 1390 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms