RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 DIAPH1O60610 1272 aaKnown RBP20.73■□□□□ 0.91
TRIM27-202ENST00000377199 USP19O94966 1318 aa20.73■□□□□ 0.91
TRIM27-202ENST00000377199 ABCC11Q96J66 1382 aa20.73■□□□□ 0.91
TRIM27-202ENST00000377199 TRIM27P14373 513 aa20.73■□□□□ 0.91
TRIM27-202ENST00000377199 PLEKHF1Q96S99 279 aa20.73■□□□□ 0.91
TRIM27-202ENST00000377199 NOB1Q9ULX3 412 aaKnown RBP20.72■□□□□ 0.91
TRIM27-202ENST00000377199 NSD2O96028 1365 aa20.72■□□□□ 0.91
TRIM27-202ENST00000377199 FAM69CQ0P6D2 419 aa20.72■□□□□ 0.91
TRIM27-202ENST00000377199 THUMPD2Q9BTF0 503 aaKnown RBP20.72■□□□□ 0.91
TRIM27-202ENST00000377199 PIK3C2BO00750 1634 aa20.7■□□□□ 0.9
TRIM27-202ENST00000377199 ELL2O00472 640 aaPredicted RBP20.7■□□□□ 0.9
TRIM27-202ENST00000377199 YTHDC2Q9H6S0 1430 aaKnown RBP20.7■□□□□ 0.9
TRIM27-202ENST00000377199 NEO1Q92859 1461 aa20.7■□□□□ 0.9
TRIM27-202ENST00000377199 UPF2Q9HAU5 1272 aaKnown RBP20.7■□□□□ 0.9
TRIM27-202ENST00000377199 ATAD2Q6PL18 1390 aa20.69■□□□□ 0.9
TRIM27-202ENST00000377199 PRKAR2BP31323 418 aa20.69■□□□□ 0.9
TRIM27-202ENST00000377199 MYO5BQ9ULV0 1848 aa20.68■□□□□ 0.9
TRIM27-202ENST00000377199 GSE1Q14687 1217 aa20.68■□□□□ 0.9
TRIM27-202ENST00000377199 PUS7Q96PZ0 661 aaKnown RBP20.68■□□□□ 0.9
TRIM27-202ENST00000377199 TMEM57Q8N5G2 664 aa20.67■□□□□ 0.9
TRIM27-202ENST00000377199 ZRANB1Q9UGI0 708 aa20.67■□□□□ 0.9
TRIM27-202ENST00000377199 NCKAP5LQ9HCH0 1330 aa20.67■□□□□ 0.9
TRIM27-202ENST00000377199 ATF7IPQ6VMQ6 1270 aa20.66■□□□□ 0.9
TRIM27-202ENST00000377199 PTPRMP28827 1452 aa20.65■□□□□ 0.9
TRIM27-202ENST00000377199 MFAP1P55081 439 aaKnown RBP20.65■□□□□ 0.9
TRIM27-202ENST00000377199 EMILIN1Q9Y6C2 1016 aa20.65■□□□□ 0.9
TRIM27-202ENST00000377199 BECN1Q14457 450 aa20.64■□□□□ 0.89
TRIM27-202ENST00000377199 USP32Q8NFA0 1604 aa20.63■□□□□ 0.89
TRIM27-202ENST00000377199 PHACTR3Q96KR7 559 aa20.63■□□□□ 0.89
TRIM27-202ENST00000377199 ARHGAP31Q2M1Z3 1444 aa20.63■□□□□ 0.89
TRIM27-202ENST00000377199 NUTM2FA1L443 756 aa20.63■□□□□ 0.89
TRIM27-202ENST00000377199 BRPF3Q9ULD4 1205 aa20.63■□□□□ 0.89
TRIM27-202ENST00000377199 TXNDC2Q86VQ3 553 aa20.62■□□□□ 0.89
TRIM27-202ENST00000377199 NME9Q86XW9 330 aa20.62■□□□□ 0.89
TRIM27-202ENST00000377199 POLKQ9UBT6 870 aa20.62■□□□□ 0.89
TRIM27-202ENST00000377199 CD163L1Q9NR16 1453 aa20.62■□□□□ 0.89
TRIM27-202ENST00000377199 C1orf115Q9H7X2 142 aa20.61■□□□□ 0.89
TRIM27-202ENST00000377199 DDX19BQ9UMR2 479 aa20.61■□□□□ 0.89
TRIM27-202ENST00000377199 RRS1Q15050 365 aaKnown RBP20.6■□□□□ 0.89
TRIM27-202ENST00000377199 ARXQ96QS3 562 aa20.6■□□□□ 0.89
TRIM27-202ENST00000377199 LNPKQ9C0E8 428 aa20.59■□□□□ 0.89
TRIM27-202ENST00000377199 SOX12O15370 315 aa20.58■□□□□ 0.89
TRIM27-202ENST00000377199 TMEM131LA2VDJ0 1609 aa20.58■□□□□ 0.88
TRIM27-202ENST00000377199 AAMPQ13685 434 aa20.58■□□□□ 0.88
TRIM27-202ENST00000377199 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.88
TRIM27-202ENST00000377199 RICTORQ6R327 1708 aa20.57■□□□□ 0.88
TRIM27-202ENST00000377199 ZFYVE9O95405 1425 aa20.57■□□□□ 0.88
TRIM27-202ENST00000377199 TBC1D32Q96NH3 1257 aa20.57■□□□□ 0.88
TRIM27-202ENST00000377199 PREX1Q8TCU6 1659 aa20.57■□□□□ 0.88
TRIM27-202ENST00000377199 COL3A1P02461 1466 aaPredicted RBP20.57■□□□□ 0.88
TRIM27-202ENST00000377199 TSPYL6Q8N831 410 aa20.57■□□□□ 0.88
TRIM27-202ENST00000377199 RSPH6AQ9H0K4 717 aa20.56■□□□□ 0.88
TRIM27-202ENST00000377199 ADGRB2O60241 1585 aa20.56■□□□□ 0.88
TRIM27-202ENST00000377199 FCHSD2O94868 740 aa20.56■□□□□ 0.88
TRIM27-202ENST00000377199 TBC1D2Q9BYX2 928 aa20.56■□□□□ 0.88
TRIM27-202ENST00000377199 ALKQ9UM73 1620 aa20.56■□□□□ 0.88
TRIM27-202ENST00000377199 CT47B1P0C2W7 299 aaPredicted RBP20.55■□□□□ 0.88
TRIM27-202ENST00000377199 DCTN1Q14203 1278 aa20.55■□□□□ 0.88
TRIM27-202ENST00000377199 PNNQ9H307 717 aaKnown RBP20.55■□□□□ 0.88
TRIM27-202ENST00000377199 FAM83GA6ND36 823 aa20.55■□□□□ 0.88
TRIM27-202ENST00000377199 NLRP1Q9C000 1473 aa20.55■□□□□ 0.88
TRIM27-202ENST00000377199 IPO8O15397 1037 aaKnown RBP20.55■□□□□ 0.88
TRIM27-202ENST00000377199 ESF1Q9H501 851 aaKnown RBP20.55■□□□□ 0.88
TRIM27-202ENST00000377199 KIF16BQ96L93 1317 aa20.54■□□□□ 0.88
TRIM27-202ENST00000377199 TSPOAP1O95153 1857 aa20.53■□□□□ 0.88
TRIM27-202ENST00000377199 C22orf23Q9BZE7 217 aa20.52■□□□□ 0.88
TRIM27-202ENST00000377199 ZBTB40Q9NUA8 1239 aa20.52■□□□□ 0.88
TRIM27-202ENST00000377199 ARHGEF40Q8TER5 1519 aa20.52■□□□□ 0.87
TRIM27-202ENST00000377199 IL16Q14005 1332 aa20.5■□□□□ 0.87
TRIM27-202ENST00000377199 RIMS2Q9UQ26 1411 aa20.5■□□□□ 0.87
TRIM27-202ENST00000377199 HDAC1Q13547 482 aaPredicted RBP20.5■□□□□ 0.87
TRIM27-202ENST00000377199 NFE2L2Q16236 605 aa20.5■□□□□ 0.87
TRIM27-202ENST00000377199 LRRC7Q96NW7 1537 aa20.5■□□□□ 0.87
TRIM27-202ENST00000377199 WASLO00401 505 aaPredicted RBP20.49■□□□□ 0.87
TRIM27-202ENST00000377199 ANKRD45Q5TZF3 282 aa20.49■□□□□ 0.87
TRIM27-202ENST00000377199 NUDT16Q96DE0 195 aaKnown RBP20.49■□□□□ 0.87
TRIM27-202ENST00000377199 COG3Q96JB2 828 aa20.49■□□□□ 0.87
TRIM27-202ENST00000377199 PNPLA6Q8IY17 1366 aa20.49■□□□□ 0.87
TRIM27-202ENST00000377199 MBIPQ9NS73 344 aa20.49■□□□□ 0.87
TRIM27-202ENST00000377199 PPIP5K1Q6PFW1 1433 aa20.48■□□□□ 0.87
TRIM27-202ENST00000377199 METP08581 1390 aa20.48■□□□□ 0.87
TRIM27-202ENST00000377199 NCBP3Q53F19 620 aaKnown RBP20.48■□□□□ 0.87
TRIM27-202ENST00000377199 VIRMAQ69YN4 1812 aaKnown RBP20.47■□□□□ 0.87
TRIM27-202ENST00000377199 VAMP4O75379 141 aa20.46■□□□□ 0.87
TRIM27-202ENST00000377199 SMC5Q8IY18 1101 aa20.46■□□□□ 0.87
TRIM27-202ENST00000377199 IL13P35225 146 aa20.45■□□□□ 0.86
TRIM27-202ENST00000377199 TWISTNBQ3B726 338 aaPredicted RBP20.45■□□□□ 0.86
TRIM27-202ENST00000377199 C8orf58Q8NAV2 365 aa20.45■□□□□ 0.86
TRIM27-202ENST00000377199 A2ML1A8K2U0 1454 aa20.45■□□□□ 0.86
TRIM27-202ENST00000377199 AEBP1Q8IUX7 1158 aa20.45■□□□□ 0.86
TRIM27-202ENST00000377199 GZF1Q9H116 711 aaPredicted RBP20.45■□□□□ 0.86
TRIM27-202ENST00000377199 ALDH1L2Q3SY69 923 aa20.44■□□□□ 0.86
TRIM27-202ENST00000377199 KRT24Q2M2I5 525 aa20.44■□□□□ 0.86
TRIM27-202ENST00000377199 CHD1LQ86WJ1 897 aa20.44■□□□□ 0.86
TRIM27-202ENST00000377199 FAM135BQ49AJ0 1406 aa20.44■□□□□ 0.86
TRIM27-202ENST00000377199 GNAI1P63096 354 aa20.43■□□□□ 0.86
TRIM27-202ENST00000377199 MED14O60244 1454 aa20.43■□□□□ 0.86
TRIM27-202ENST00000377199 MRPL50Q8N5N7 158 aaKnown RBP20.43■□□□□ 0.86
TRIM27-202ENST00000377199 ANTXR1Q9H6X2 564 aa20.43■□□□□ 0.86
TRIM27-202ENST00000377199 NUCB1Q02818 461 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms