RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CCDC61Q9Y6R9 512 aa21.31■■□□□ 1
HDAC6-204ENST00000376643 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
HDAC6-204ENST00000376643 CDK19Q9BWU1 502 aa21.29■■□□□ 1
HDAC6-204ENST00000376643 BTG4Q9NY30 223 aa21.29■■□□□ 1
HDAC6-204ENST00000376643 A0A0G2JS52 829 aa21.28■■□□□ 1
HDAC6-204ENST00000376643 MYT1Q01538 1121 aa21.28■■□□□ 1
HDAC6-204ENST00000376643 KRT27Q7Z3Y8 459 aa21.28■■□□□ 1
HDAC6-204ENST00000376643 PRDM11Q9NQV5 511 aa21.28■■□□□ 1
HDAC6-204ENST00000376643 POLR3AO14802 1390 aaPredicted RBP21.27■■□□□ 1
HDAC6-204ENST00000376643 PLEKHG3A1L390 1219 aa21.25■□□□□ 0.99
HDAC6-204ENST00000376643 CENPJQ9HC77 1338 aaPredicted RBP21.25■□□□□ 0.99
HDAC6-204ENST00000376643 NRAPQ86VF7 1730 aa21.24■□□□□ 0.99
HDAC6-204ENST00000376643 BRD4O60885 1362 aaPredicted RBP21.23■□□□□ 0.99
HDAC6-204ENST00000376643 SRPK2P78362 688 aaKnown RBP21.22■□□□□ 0.99
HDAC6-204ENST00000376643 NBPF8Q3BBV2 869 aa21.22■□□□□ 0.99
HDAC6-204ENST00000376643 EP400Q96L91 3159 aa21.22■□□□□ 0.99
HDAC6-204ENST00000376643 ACEP12821 1306 aa21.22■□□□□ 0.99
HDAC6-204ENST00000376643 TOPAZ1Q8N9V7 1692 aa21.21■□□□□ 0.99
HDAC6-204ENST00000376643 FAM98CQ17RN3 349 aaKnown RBP21.21■□□□□ 0.99
HDAC6-204ENST00000376643 SPATA31A5Q5VU36 1347 aa21.21■□□□□ 0.99
HDAC6-204ENST00000376643 SPATA31A7Q8IWB4 1347 aa21.21■□□□□ 0.99
HDAC6-204ENST00000376643 NBPF1Q3BBV0 1214 aa21.2■□□□□ 0.98
HDAC6-204ENST00000376643 CRYBG1Q9Y4K1 1723 aa21.2■□□□□ 0.98
HDAC6-204ENST00000376643 BAG6P46379 1132 aa21.19■□□□□ 0.98
HDAC6-204ENST00000376643 BRWD3Q6RI45 1802 aa21.19■□□□□ 0.98
HDAC6-204ENST00000376643 KIAA0232Q92628 1395 aa21.19■□□□□ 0.98
HDAC6-204ENST00000376643 ABTB2Q8N961 1025 aa21.18■□□□□ 0.98
HDAC6-204ENST00000376643 NLRP13Q86W25 1043 aa21.17■□□□□ 0.98
HDAC6-204ENST00000376643 PPIP5K1Q6PFW1 1433 aa21.17■□□□□ 0.98
HDAC6-204ENST00000376643 PHRF1Q9P1Y6 1649 aaKnown RBP21.15■□□□□ 0.98
HDAC6-204ENST00000376643 EVC2Q86UK5 1308 aa21.15■□□□□ 0.98
HDAC6-204ENST00000376643 L3MBTL2Q969R5 705 aa21.15■□□□□ 0.98
HDAC6-204ENST00000376643 CPDO75976 1380 aa21.14■□□□□ 0.98
HDAC6-204ENST00000376643 SPATA31A1Q5TZJ5 1347 aa21.14■□□□□ 0.97
HDAC6-204ENST00000376643 EVA1CP58658 441 aa21.14■□□□□ 0.97
HDAC6-204ENST00000376643 USP19O94966 1318 aa21.13■□□□□ 0.97
HDAC6-204ENST00000376643 ZC3H6P61129 1189 aaKnown RBP21.13■□□□□ 0.97
HDAC6-204ENST00000376643 DEFB132Q7Z7B7 95 aa21.12■□□□□ 0.97
HDAC6-204ENST00000376643 STRN4Q9NRL3 753 aa21.12■□□□□ 0.97
HDAC6-204ENST00000376643 QRICH2Q9H0J4 1663 aa21.12■□□□□ 0.97
HDAC6-204ENST00000376643 ROCK2O75116 1388 aaKnown RBP21.11■□□□□ 0.97
HDAC6-204ENST00000376643 CHRNA2Q15822 529 aa21.11■□□□□ 0.97
HDAC6-204ENST00000376643 NUTM2GQ5VZR2 741 aa21.11■□□□□ 0.97
HDAC6-204ENST00000376643 CABP2Q9NPB3 220 aa21.11■□□□□ 0.97
HDAC6-204ENST00000376643 THSD7AQ9UPZ6 1657 aa21.11■□□□□ 0.97
HDAC6-204ENST00000376643 BARGINQ6ZT62 677 aa21.1■□□□□ 0.97
HDAC6-204ENST00000376643 NRKQ7Z2Y5 1582 aa21.1■□□□□ 0.97
HDAC6-204ENST00000376643 SSH2Q76I76 1423 aa21.09■□□□□ 0.97
HDAC6-204ENST00000376643 RGPD1P0DJD0 1748 aa21.08■□□□□ 0.97
HDAC6-204ENST00000376643 USP6P35125 1406 aa21.08■□□□□ 0.97
HDAC6-204ENST00000376643 FAM196AQ6ZSG2 479 aa21.08■□□□□ 0.97
HDAC6-204ENST00000376643 THRAP3Q9Y2W1 955 aaKnown RBP21.08■□□□□ 0.97
HDAC6-204ENST00000376643 C11orf95C9JLR9 678 aaPredicted RBP21.07■□□□□ 0.96
HDAC6-204ENST00000376643 GCP02774 474 aa21.07■□□□□ 0.96
HDAC6-204ENST00000376643 ZNF692Q9BU19 519 aaPredicted RBP21.07■□□□□ 0.96
HDAC6-204ENST00000376643 CABP1Q9NZU7 370 aa21.07■□□□□ 0.96
HDAC6-204ENST00000376643 TRPM1Q7Z4N2 1603 aa21.07■□□□□ 0.96
HDAC6-204ENST00000376643 DISP2A7MBM2 1401 aa21.06■□□□□ 0.96
HDAC6-204ENST00000376643 NEUROD1Q13562 356 aa21.06■□□□□ 0.96
HDAC6-204ENST00000376643 TCP11L2Q8N4U5 519 aa21.06■□□□□ 0.96
HDAC6-204ENST00000376643 PDE3BQ13370 1112 aa21.05■□□□□ 0.96
HDAC6-204ENST00000376643 NLRP6P59044 892 aa21.04■□□□□ 0.96
HDAC6-204ENST00000376643 SIN3AQ96ST3 1273 aa21.04■□□□□ 0.96
HDAC6-204ENST00000376643 PARD3Q8TEW0 1356 aa21.03■□□□□ 0.96
HDAC6-204ENST00000376643 USP35Q9P2H5 1018 aa21.03■□□□□ 0.96
HDAC6-204ENST00000376643 LMO7Q8WWI1 1683 aa21.02■□□□□ 0.95
HDAC6-204ENST00000376643 CAMTA1Q9Y6Y1 1673 aa21.02■□□□□ 0.95
HDAC6-204ENST00000376643 AATKQ6ZMQ8 1374 aa21.01■□□□□ 0.95
HDAC6-204ENST00000376643 KCNH5Q8NCM2 988 aa21.01■□□□□ 0.95
HDAC6-204ENST00000376643 TTC21AQ8NDW8 1320 aa21.01■□□□□ 0.95
HDAC6-204ENST00000376643 SBNO2Q9Y2G9 1366 aa21■□□□□ 0.95
HDAC6-204ENST00000376643 LARP1Q6PKG0 1096 aaKnown RBP21■□□□□ 0.95
HDAC6-204ENST00000376643 COL5A2P05997 1499 aaPredicted RBP21■□□□□ 0.95
HDAC6-204ENST00000376643 SLIT3O75094 1523 aa20.99■□□□□ 0.95
HDAC6-204ENST00000376643 CRB1P82279 1406 aa20.99■□□□□ 0.95
HDAC6-204ENST00000376643 EN1Q05925 392 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-204ENST00000376643 FAM182BQ5T319 152 aa20.97■□□□□ 0.95
HDAC6-204ENST00000376643 TONSLQ96HA7 1378 aa20.97■□□□□ 0.95
HDAC6-204ENST00000376643 TRIM37O94972 964 aa20.96■□□□□ 0.95
HDAC6-204ENST00000376643 SRCAPQ6ZRS2 3230 aa20.96■□□□□ 0.95
HDAC6-204ENST00000376643 LRP5O75197 1615 aa20.96■□□□□ 0.95
HDAC6-204ENST00000376643 ZBTB7CA1YPR0 619 aa20.95■□□□□ 0.94
HDAC6-204ENST00000376643 CDCA7Q9BWT1 371 aaPredicted RBP20.95■□□□□ 0.94
HDAC6-204ENST00000376643 CARD11Q9BXL7 1154 aa20.95■□□□□ 0.94
HDAC6-204ENST00000376643 TTC21BQ7Z4L5 1316 aa20.95■□□□□ 0.94
HDAC6-204ENST00000376643 APBA3O96018 575 aa20.94■□□□□ 0.94
HDAC6-204ENST00000376643 TNS1Q9HBL0 1735 aaKnown RBP20.94■□□□□ 0.94
HDAC6-204ENST00000376643 SLC24A1O60721 1099 aa20.93■□□□□ 0.94
HDAC6-204ENST00000376643 TOM1L2Q6ZVM7 507 aa20.93■□□□□ 0.94
HDAC6-204ENST00000376643 KTN1Q86UP2 1357 aaKnown RBP20.93■□□□□ 0.94
HDAC6-204ENST00000376643 CPSF1Q10570 1443 aaKnown RBP20.93■□□□□ 0.94
HDAC6-204ENST00000376643 PIK3C2AO00443 1686 aa20.93■□□□□ 0.94
HDAC6-204ENST00000376643 OVOS2A0A0G2JMS6 1433 aa20.91■□□□□ 0.94
HDAC6-204ENST00000376643 OVOS2A0A0J9YW53 1432 aa20.91■□□□□ 0.94
HDAC6-204ENST00000376643 PSDA5PKW4 1024 aaPredicted RBP20.91■□□□□ 0.94
HDAC6-204ENST00000376643 OVOS2Q6IE36 1432 aa20.91■□□□□ 0.94
HDAC6-204ENST00000376643 WDR17Q8IZU2 1322 aa20.91■□□□□ 0.94
HDAC6-204ENST00000376643 CAMKK2Q96RR4 588 aa20.91■□□□□ 0.94
HDAC6-204ENST00000376643 PARP4Q9UKK3 1724 aaKnown RBP20.91■□□□□ 0.94
HDAC6-204ENST00000376643 AKAP12Q02952 1782 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms