RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 CCDC61Q9Y6R9 512 aa12.58□□□□□ -0.4
ZNF550-203ENST00000376230 NPATQ14207 1427 aa12.57□□□□□ -0.4
ZNF550-203ENST00000376230 NKTRP30414 1462 aaKnown RBP12.57□□□□□ -0.4
ZNF550-203ENST00000376230 POLKQ9UBT6 870 aa12.57□□□□□ -0.4
ZNF550-203ENST00000376230 ASXL1Q8IXJ9 1541 aa12.57□□□□□ -0.4
ZNF550-203ENST00000376230 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
ZNF550-203ENST00000376230 CSB-PGBD3P0DP91 1061 aa12.57□□□□□ -0.4
ZNF550-203ENST00000376230 KDM2BQ8NHM5 1336 aa12.57□□□□□ -0.4
ZNF550-203ENST00000376230 C22orf23Q9BZE7 217 aa12.57□□□□□ -0.4
ZNF550-203ENST00000376230 GOLGA6L3A6NEY3 463 aa12.56□□□□□ -0.4
ZNF550-203ENST00000376230 WDR63Q8IWG1 891 aa12.56□□□□□ -0.4
ZNF550-203ENST00000376230 STK31Q9BXU1 1019 aa12.56□□□□□ -0.4
ZNF550-203ENST00000376230 ANXA1P04083 346 aa12.56□□□□□ -0.4
ZNF550-203ENST00000376230 WASLO00401 505 aaPredicted RBP12.55□□□□□ -0.4
ZNF550-203ENST00000376230 ESCO1Q5FWF5 840 aa12.55□□□□□ -0.4
ZNF550-203ENST00000376230 C8orf58Q8NAV2 365 aa12.55□□□□□ -0.4
ZNF550-203ENST00000376230 KDM5DQ9BY66 1539 aa12.55□□□□□ -0.4
ZNF550-203ENST00000376230 AIMP1Q12904 312 aaKnown RBP12.55□□□□□ -0.4
ZNF550-203ENST00000376230 ATP7AQ04656 1500 aa12.55□□□□□ -0.4
ZNF550-203ENST00000376230 MAP4K4O95819 1239 aaPredicted RBP12.54□□□□□ -0.4
ZNF550-203ENST00000376230 PSME1Q06323 249 aa12.54□□□□□ -0.4
ZNF550-203ENST00000376230 RPGRIP1LQ68CZ1 1315 aa12.54□□□□□ -0.4
ZNF550-203ENST00000376230 DTNBO60941 627 aa12.54□□□□□ -0.4
ZNF550-203ENST00000376230 GNAI1P63096 354 aa12.54□□□□□ -0.4
ZNF550-203ENST00000376230 ADGBQ8N7X0 1667 aa12.54□□□□□ -0.4
ZNF550-203ENST00000376230 L1TD1Q5T7N2 865 aaKnown RBP12.53□□□□□ -0.4
ZNF550-203ENST00000376230 TRIM44Q96DX7 344 aaPredicted RBP12.53□□□□□ -0.4
ZNF550-203ENST00000376230 PANK2Q9BZ23 570 aa12.53□□□□□ -0.4
ZNF550-203ENST00000376230 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
ZNF550-203ENST00000376230 AMOTL2Q9Y2J4 779 aa12.53□□□□□ -0.4
ZNF550-203ENST00000376230 ARID3AQ99856 593 aa12.53□□□□□ -0.4
ZNF550-203ENST00000376230 MAST1Q9Y2H9 1570 aa12.52□□□□□ -0.4
ZNF550-203ENST00000376230 NFE2L2Q16236 605 aa12.52□□□□□ -0.4
ZNF550-203ENST00000376230 C16orf71Q8IYS4 520 aaPredicted RBP12.52□□□□□ -0.4
ZNF550-203ENST00000376230 ZNF518AQ6AHZ1 1483 aa12.52□□□□□ -0.4
ZNF550-203ENST00000376230 RSPH6AQ9H0K4 717 aa12.52□□□□□ -0.41
ZNF550-203ENST00000376230 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.41
ZNF550-203ENST00000376230 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.52□□□□□ -0.41
ZNF550-203ENST00000376230 EXOC6BQ9Y2D4 811 aa12.52□□□□□ -0.41
ZNF550-203ENST00000376230 CDC42BPBQ9Y5S2 1711 aa12.52□□□□□ -0.41
ZNF550-203ENST00000376230 CALD1Q05682 793 aaKnown RBP12.51□□□□□ -0.41
ZNF550-203ENST00000376230 ZC3H6P61129 1189 aaKnown RBP12.51□□□□□ -0.41
ZNF550-203ENST00000376230 ACEP12821 1306 aa12.51□□□□□ -0.41
ZNF550-203ENST00000376230 PTPRTO14522 1441 aa12.51□□□□□ -0.41
ZNF550-203ENST00000376230 FCHSD2O94868 740 aa12.51□□□□□ -0.41
ZNF550-203ENST00000376230 PLCB2Q00722 1185 aa12.51□□□□□ -0.41
ZNF550-203ENST00000376230 TBC1D2Q9BYX2 928 aa12.51□□□□□ -0.41
ZNF550-203ENST00000376230 KIF16BQ96L93 1317 aa12.51□□□□□ -0.41
ZNF550-203ENST00000376230 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
ZNF550-203ENST00000376230 IL1RAPL2Q9NP60 686 aa12.5□□□□□ -0.41
ZNF550-203ENST00000376230 ERVK-7P63135 1459 aa12.5□□□□□ -0.41
ZNF550-203ENST00000376230 PRDM15P57071 1507 aaPredicted RBP12.5□□□□□ -0.41
ZNF550-203ENST00000376230 FAM43AQ8N2R8 423 aa12.5□□□□□ -0.41
ZNF550-203ENST00000376230 RRAGDQ9NQL2 400 aaPredicted RBP12.5□□□□□ -0.41
ZNF550-203ENST00000376230 CHMP3Q9Y3E7 222 aa12.49□□□□□ -0.41
ZNF550-203ENST00000376230 ARHGEF5Q12774 1597 aa12.49□□□□□ -0.41
ZNF550-203ENST00000376230 LMOD3Q0VAK6 560 aa12.49□□□□□ -0.41
ZNF550-203ENST00000376230 VSIG10Q8N0Z9 540 aa12.49□□□□□ -0.41
ZNF550-203ENST00000376230 NAP1L2Q9ULW6 460 aaPredicted RBP12.49□□□□□ -0.41
ZNF550-203ENST00000376230 KCNJ4P48050 445 aa12.48□□□□□ -0.41
ZNF550-203ENST00000376230 DDX54Q8TDD1 881 aaKnown RBP12.48□□□□□ -0.41
ZNF550-203ENST00000376230 ANKRD36BQ8N2N9 1353 aa12.48□□□□□ -0.41
ZNF550-203ENST00000376230 ZCCHC11Q5TAX3 1644 aaKnown RBP12.48□□□□□ -0.41
ZNF550-203ENST00000376230 PREX2Q70Z35 1606 aa12.48□□□□□ -0.41
ZNF550-203ENST00000376230 TEFQ10587 303 aa12.48□□□□□ -0.41
ZNF550-203ENST00000376230 LARP6Q9BRS8 491 aaKnown RBP12.48□□□□□ -0.41
ZNF550-203ENST00000376230 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
ZNF550-203ENST00000376230 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
ZNF550-203ENST00000376230 CASC1Q6TDU7 716 aa12.47□□□□□ -0.41
ZNF550-203ENST00000376230 TRAK2O60296 914 aa12.47□□□□□ -0.41
ZNF550-203ENST00000376230 JARID2Q92833 1246 aaPredicted RBP12.47□□□□□ -0.41
ZNF550-203ENST00000376230 ABCC1P33527 1531 aa12.47□□□□□ -0.41
ZNF550-203ENST00000376230 MYO5CQ9NQX4 1742 aa12.46□□□□□ -0.41
ZNF550-203ENST00000376230 PIP4K2AP48426 406 aaPredicted RBP12.46□□□□□ -0.41
ZNF550-203ENST00000376230 ZNF521Q96K83 1311 aa12.46□□□□□ -0.41
ZNF550-203ENST00000376230 LTKP29376 864 aa12.46□□□□□ -0.41
ZNF550-203ENST00000376230 OTUD7AQ8TE49 926 aaPredicted RBP12.46□□□□□ -0.41
ZNF550-203ENST00000376230 EIF4A2Q14240 407 aaKnown RBP12.46□□□□□ -0.42
ZNF550-203ENST00000376230 API5Q9BZZ5 524 aaKnown RBP12.46□□□□□ -0.42
ZNF550-203ENST00000376230 NLRP2Q9NX02 1062 aa12.46□□□□□ -0.42
ZNF550-203ENST00000376230 POLR3AO14802 1390 aaPredicted RBP12.45□□□□□ -0.42
ZNF550-203ENST00000376230 BLMP54132 1417 aaPredicted RBP12.45□□□□□ -0.42
ZNF550-203ENST00000376230 GLIPR1L2Q4G1C9 344 aa12.45□□□□□ -0.42
ZNF550-203ENST00000376230 ANO2Q9NQ90 1003 aa12.45□□□□□ -0.42
ZNF550-203ENST00000376230 XRCC6P12956 609 aaKnown RBP eCLIP12.45□□□□□ -0.42
ZNF550-203ENST00000376230 MEIS3Q99687 375 aa12.45□□□□□ -0.42
ZNF550-203ENST00000376230 MCM4P33991 863 aa12.44□□□□□ -0.42
ZNF550-203ENST00000376230 MPRIPQ6WCQ1 1025 aa12.44□□□□□ -0.42
ZNF550-203ENST00000376230 PIK3C2GO75747 1445 aa12.44□□□□□ -0.42
ZNF550-203ENST00000376230 G2E3Q7L622 706 aa12.44□□□□□ -0.42
ZNF550-203ENST00000376230 VAMP4O75379 141 aa12.43□□□□□ -0.42
ZNF550-203ENST00000376230 MPNDQ8N594 471 aa12.43□□□□□ -0.42
ZNF550-203ENST00000376230 ANP32BQ92688 251 aaKnown RBP12.43□□□□□ -0.42
ZNF550-203ENST00000376230 LRRC59Q96AG4 307 aaKnown RBP12.43□□□□□ -0.42
ZNF550-203ENST00000376230 YTHDC2Q9H6S0 1430 aaKnown RBP12.43□□□□□ -0.42
ZNF550-203ENST00000376230 HSP90AA2PQ14568 343 aaPredicted RBP12.42□□□□□ -0.42
ZNF550-203ENST00000376230 PPIP5K1Q6PFW1 1433 aa12.42□□□□□ -0.42
ZNF550-203ENST00000376230 HDGFL1Q5TGJ6 251 aa12.42□□□□□ -0.42
ZNF550-203ENST00000376230 DDX17Q92841 729 aaKnown RBP12.42□□□□□ -0.42
ZNF550-203ENST00000376230 ADCY10Q96PN6 1610 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms