RNA–Protein interactions for RNA: ENST00000375430.8

GRTP1-202, Transcript of growth hormone regulated TBC protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GRTP1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRTP1-202ENST00000375430 NCBP3Q53F19 620 aaKnown RBP27.74■■■□□ 2.03
GRTP1-202ENST00000375430 MON2Q7Z3U7 1717 aa27.74■■■□□ 2.03
GRTP1-202ENST00000375430 XRN1Q8IZH2 1706 aaKnown RBP27.74■■■□□ 2.03
GRTP1-202ENST00000375430 AKAP12Q02952 1782 aa27.73■■■□□ 2.03
GRTP1-202ENST00000375430 COL3A1P02461 1466 aaPredicted RBP27.73■■■□□ 2.03
GRTP1-202ENST00000375430 IQSEC2Q5JU85 1478 aa27.73■■■□□ 2.03
GRTP1-202ENST00000375430 LMTK3Q96Q04 1460 aa27.73■■■□□ 2.03
GRTP1-202ENST00000375430 CHD2O14647 1828 aaKnown RBP27.71■■■□□ 2.03
GRTP1-202ENST00000375430 B4GALNT3Q6L9W6 998 aa27.71■■■□□ 2.03
GRTP1-202ENST00000375430 ITSN1Q15811 1721 aa27.7■■■□□ 2.02
GRTP1-202ENST00000375430 PNPLA6Q8IY17 1366 aa27.69■■■□□ 2.02
GRTP1-202ENST00000375430 E9PSI1 815 aa27.69■■■□□ 2.02
GRTP1-202ENST00000375430 PHF23Q9BUL5 403 aaPredicted RBP27.67■■■□□ 2.02
GRTP1-202ENST00000375430 TOPAZ1Q8N9V7 1692 aa27.67■■■□□ 2.02
GRTP1-202ENST00000375430 WWC1Q8IX03 1113 aa27.67■■■□□ 2.02
GRTP1-202ENST00000375430 ZNF692Q9BU19 519 aaPredicted RBP27.67■■■□□ 2.02
GRTP1-202ENST00000375430 PRR36Q9H6K5 1346 aa27.66■■■□□ 2.02
GRTP1-202ENST00000375430 CCDC27Q2M243 656 aa27.65■■■□□ 2.02
GRTP1-202ENST00000375430 TCP11L2Q8N4U5 519 aa27.65■■■□□ 2.02
GRTP1-202ENST00000375430 NKTRP30414 1462 aaKnown RBP27.65■■■□□ 2.02
GRTP1-202ENST00000375430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.64■■■□□ 2.02
GRTP1-202ENST00000375430 U2AF1L5P0DN76 240 aaPredicted RBP27.64■■■□□ 2.01
GRTP1-202ENST00000375430 U2AF1Q01081 240 aaKnown RBP eCLIP27.64■■■□□ 2.01
GRTP1-202ENST00000375430 MAP2P11137 1827 aaKnown RBP27.63■■■□□ 2.01
GRTP1-202ENST00000375430 SPINK5Q9NQ38 1064 aaPredicted RBP27.62■■■□□ 2.01
GRTP1-202ENST00000375430 CCDC136Q96JN2 1154 aa27.62■■■□□ 2.01
GRTP1-202ENST00000375430 WDR63Q8IWG1 891 aa27.6■■■□□ 2.01
GRTP1-202ENST00000375430 PLEKHG3A1L390 1219 aa27.6■■■□□ 2.01
GRTP1-202ENST00000375430 AATKQ6ZMQ8 1374 aa27.59■■■□□ 2.01
GRTP1-202ENST00000375430 DIAPH1O60610 1272 aaKnown RBP27.58■■■□□ 2.01
GRTP1-202ENST00000375430 DMRT2Q9Y5R5 561 aa27.58■■■□□ 2.01
GRTP1-202ENST00000375430 EXOC6Q8TAG9 804 aa27.57■■■□□ 2
GRTP1-202ENST00000375430 POLKQ9UBT6 870 aa27.57■■■□□ 2
GRTP1-202ENST00000375430 NRKQ7Z2Y5 1582 aa27.57■■■□□ 2
GRTP1-202ENST00000375430 PLEKHF1Q96S99 279 aa27.57■■■□□ 2
GRTP1-202ENST00000375430 NWD1Q149M9 1564 aa27.57■■■□□ 2
GRTP1-202ENST00000375430 NME9Q86XW9 330 aa27.55■■■□□ 2
GRTP1-202ENST00000375430 PNNQ9H307 717 aaKnown RBP27.55■■■□□ 2
GRTP1-202ENST00000375430 U2SURPO15042 1029 aaKnown RBP27.53■■■□□ 2
GRTP1-202ENST00000375430 PLIN1O60240 522 aa27.53■■■□□ 2
GRTP1-202ENST00000375430 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.53■■■□□ 2
GRTP1-202ENST00000375430 STRCQ7RTU9 1775 aa27.53■■■□□ 2
GRTP1-202ENST00000375430 PROSER2Q86WR7 435 aaPredicted RBP27.53■■■□□ 2
GRTP1-202ENST00000375430 COG3Q96JB2 828 aa27.53■■■□□ 2
GRTP1-202ENST00000375430 RRP7AQ9Y3A4 280 aaKnown RBP27.53■■■□□ 2
GRTP1-202ENST00000375430 CDK12Q9NYV4 1490 aaPredicted RBP27.52■■■□□ 2
GRTP1-202ENST00000375430 NUTM2FA1L443 756 aa27.52■■■□□ 2
GRTP1-202ENST00000375430 NEUROD2Q15784 382 aa27.51■■□□□ 1.99
GRTP1-202ENST00000375430 C14orf37Q86TY3 774 aa27.51■■□□□ 1.99
GRTP1-202ENST00000375430 ACEP12821 1306 aa27.51■■□□□ 1.99
GRTP1-202ENST00000375430 RBM33Q96EV2 1170 aaKnown RBP27.51■■□□□ 1.99
GRTP1-202ENST00000375430 USP6P35125 1406 aa27.49■■□□□ 1.99
GRTP1-202ENST00000375430 FCHSD2O94868 740 aa27.48■■□□□ 1.99
GRTP1-202ENST00000375430 TTC21BQ7Z4L5 1316 aa27.48■■□□□ 1.99
GRTP1-202ENST00000375430 ADGRL3Q9HAR2 1447 aa27.48■■□□□ 1.99
GRTP1-202ENST00000375430 ZRANB1Q9UGI0 708 aa27.47■■□□□ 1.99
GRTP1-202ENST00000375430 TMPOP42166 694 aaKnown RBP27.46■■□□□ 1.99
GRTP1-202ENST00000375430 MAPK8IP3Q9UPT6 1336 aa27.46■■□□□ 1.99
GRTP1-202ENST00000375430 NALCNQ8IZF0 1738 aa27.46■■□□□ 1.99
GRTP1-202ENST00000375430 SSH2Q76I76 1423 aa27.46■■□□□ 1.99
GRTP1-202ENST00000375430 CRBNQ96SW2 442 aa27.46■■□□□ 1.99
GRTP1-202ENST00000375430 ANKARQ7Z5J8 1434 aa27.45■■□□□ 1.99
GRTP1-202ENST00000375430 FBLN1P23142 703 aa27.44■■□□□ 1.98
GRTP1-202ENST00000375430 RGPD8O14715 1765 aaPredicted RBP27.44■■□□□ 1.98
GRTP1-202ENST00000375430 OVOS2A0A0J9YW53 1432 aa27.44■■□□□ 1.98
GRTP1-202ENST00000375430 OVOS2Q6IE36 1432 aa27.44■■□□□ 1.98
GRTP1-202ENST00000375430 MYH16Q9H6N6 1097 aa27.43■■□□□ 1.98
GRTP1-202ENST00000375430 EMILIN1Q9Y6C2 1016 aa27.43■■□□□ 1.98
GRTP1-202ENST00000375430 PPM1GO15355 546 aaPredicted RBP27.42■■□□□ 1.98
GRTP1-202ENST00000375430 C20orf194Q5TEA3 1177 aa27.42■■□□□ 1.98
GRTP1-202ENST00000375430 FMN2Q9NZ56 1722 aa27.42■■□□□ 1.98
GRTP1-202ENST00000375430 LRRC7Q96NW7 1537 aa27.42■■□□□ 1.98
GRTP1-202ENST00000375430 IL13P35225 146 aa27.41■■□□□ 1.98
GRTP1-202ENST00000375430 RSPH6AQ9H0K4 717 aa27.41■■□□□ 1.98
GRTP1-202ENST00000375430 IL16Q14005 1332 aa27.4■■□□□ 1.98
GRTP1-202ENST00000375430 TTC21AQ8NDW8 1320 aa27.4■■□□□ 1.98
GRTP1-202ENST00000375430 TRIM35Q9UPQ4 493 aa27.4■■□□□ 1.98
GRTP1-202ENST00000375430 RBM19Q9Y4C8 960 aaKnown RBP27.4■■□□□ 1.98
GRTP1-202ENST00000375430 C19orf44Q9H6X5 657 aa27.39■■□□□ 1.97
GRTP1-202ENST00000375430 NCOA3Q9Y6Q9 1424 aa27.39■■□□□ 1.97
GRTP1-202ENST00000375430 USP31Q70CQ4 1352 aa27.38■■□□□ 1.97
GRTP1-202ENST00000375430 STRCP1A6NGW2 1772 aa27.38■■□□□ 1.97
GRTP1-202ENST00000375430 TMEM94Q12767 1356 aa27.38■■□□□ 1.97
GRTP1-202ENST00000375430 BCAR3O75815 825 aa27.37■■□□□ 1.97
GRTP1-202ENST00000375430 PMFBP1Q8TBY8 1022 aa27.37■■□□□ 1.97
GRTP1-202ENST00000375430 NGDNQ8NEJ9 315 aaKnown RBP27.37■■□□□ 1.97
GRTP1-202ENST00000375430 CT47B1P0C2W7 299 aaPredicted RBP27.35■■□□□ 1.97
GRTP1-202ENST00000375430 RIPK4P57078 832 aa27.34■■□□□ 1.97
GRTP1-202ENST00000375430 NEFMP07197 916 aa27.34■■□□□ 1.97
GRTP1-202ENST00000375430 PRKAR2BP31323 418 aa27.34■■□□□ 1.97
GRTP1-202ENST00000375430 PDE3AQ14432 1141 aa27.34■■□□□ 1.97
GRTP1-202ENST00000375430 RRS1Q15050 365 aaKnown RBP27.34■■□□□ 1.97
GRTP1-202ENST00000375430 RARSP54136 660 aaKnown RBP27.33■■□□□ 1.97
GRTP1-202ENST00000375430 ZNF335Q9H4Z2 1342 aaPredicted RBP27.32■■□□□ 1.96
GRTP1-202ENST00000375430 ATF3P18847 181 aa27.31■■□□□ 1.96
GRTP1-202ENST00000375430 PHF8Q9UPP1 1060 aa27.3■■□□□ 1.96
GRTP1-202ENST00000375430 ESCO1Q5FWF5 840 aa27.29■■□□□ 1.96
GRTP1-202ENST00000375430 FANCIQ9NVI1 1328 aa27.29■■□□□ 1.96
GRTP1-202ENST00000375430 NFE2L2Q16236 605 aa27.28■■□□□ 1.96
GRTP1-202ENST00000375430 USP54Q70EL1 1684 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms