RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 RBM6P78332 1123 aaKnown RBP21.8■■□□□ 1.08
APOA1-205ENST00000375329 ALS2Q96Q42 1657 aa21.79■■□□□ 1.08
APOA1-205ENST00000375329 SLC24A1O60721 1099 aa21.79■■□□□ 1.08
APOA1-205ENST00000375329 BRD4O60885 1362 aaPredicted RBP21.78■■□□□ 1.08
APOA1-205ENST00000375329 CABLES1Q8TDN4 633 aa21.78■■□□□ 1.08
APOA1-205ENST00000375329 CDK12Q9NYV4 1490 aaPredicted RBP21.77■■□□□ 1.08
APOA1-205ENST00000375329 ATAD2Q6PL18 1390 aa21.76■■□□□ 1.07
APOA1-205ENST00000375329 CABP1Q9NZU7 370 aa21.76■■□□□ 1.07
APOA1-205ENST00000375329 PLEKHG5O94827 1062 aa21.75■■□□□ 1.07
APOA1-205ENST00000375329 ABCA3Q99758 1704 aa21.74■■□□□ 1.07
APOA1-205ENST00000375329 UNC5CLQ8IV45 518 aa21.73■■□□□ 1.07
APOA1-205ENST00000375329 ZNF692Q9BU19 519 aaPredicted RBP21.73■■□□□ 1.07
APOA1-205ENST00000375329 BCL9LQ86UU0 1499 aa21.72■■□□□ 1.07
APOA1-205ENST00000375329 ABTB2Q8N961 1025 aa21.72■■□□□ 1.07
APOA1-205ENST00000375329 ATRNO75882 1429 aa21.72■■□□□ 1.07
APOA1-205ENST00000375329 SLIT2O94813 1529 aa21.71■■□□□ 1.07
APOA1-205ENST00000375329 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.71■■□□□ 1.07
APOA1-205ENST00000375329 PUS7Q96PZ0 661 aaKnown RBP21.7■■□□□ 1.06
APOA1-205ENST00000375329 NWD2Q9ULI1 1742 aa21.69■■□□□ 1.06
APOA1-205ENST00000375329 NLRP13Q86W25 1043 aa21.69■■□□□ 1.06
APOA1-205ENST00000375329 USP6P35125 1406 aa21.68■■□□□ 1.06
APOA1-205ENST00000375329 ST20-MTHFSA0A0A6YYL1 179 aa21.67■■□□□ 1.06
APOA1-205ENST00000375329 FAM83GA6ND36 823 aa21.67■■□□□ 1.06
APOA1-205ENST00000375329 GJD4Q96KN9 370 aaPredicted RBP21.67■■□□□ 1.06
APOA1-205ENST00000375329 PRDM11Q9NQV5 511 aa21.66■■□□□ 1.06
APOA1-205ENST00000375329 PLCH1Q4KWH8 1693 aa21.66■■□□□ 1.06
APOA1-205ENST00000375329 NUTM2GQ5VZR2 741 aa21.65■■□□□ 1.06
APOA1-205ENST00000375329 COL14A1Q05707 1796 aaKnown RBP21.65■■□□□ 1.06
APOA1-205ENST00000375329 CRYBG1Q9Y4K1 1723 aa21.65■■□□□ 1.06
APOA1-205ENST00000375329 VPS72Q15906 364 aa21.64■■□□□ 1.05
APOA1-205ENST00000375329 UPF1Q92900 1129 aaKnown RBP eCLIP21.63■■□□□ 1.05
APOA1-205ENST00000375329 AKAP12Q02952 1782 aa21.63■■□□□ 1.05
APOA1-205ENST00000375329 RGS12O14924 1447 aa21.63■■□□□ 1.05
APOA1-205ENST00000375329 USP47Q96K76 1375 aa21.62■■□□□ 1.05
APOA1-205ENST00000375329 USP19O94966 1318 aa21.62■■□□□ 1.05
APOA1-205ENST00000375329 TTC21AQ8NDW8 1320 aa21.62■■□□□ 1.05
APOA1-205ENST00000375329 NLRP6P59044 892 aa21.62■■□□□ 1.05
APOA1-205ENST00000375329 TMC1Q8TDI8 760 aa21.62■■□□□ 1.05
APOA1-205ENST00000375329 TESK2Q96S53 571 aa21.62■■□□□ 1.05
APOA1-205ENST00000375329 BTG4Q9NY30 223 aa21.62■■□□□ 1.05
APOA1-205ENST00000375329 CCDC9Q9Y3X0 531 aaKnown RBP21.62■■□□□ 1.05
APOA1-205ENST00000375329 PHRF1Q9P1Y6 1649 aaKnown RBP21.62■■□□□ 1.05
APOA1-205ENST00000375329 KTN1Q86UP2 1357 aaKnown RBP21.61■■□□□ 1.05
APOA1-205ENST00000375329 HDGFL2Q7Z4V5 671 aaPredicted RBP21.61■■□□□ 1.05
APOA1-205ENST00000375329 TERF2IPQ9NYB0 399 aa21.61■■□□□ 1.05
APOA1-205ENST00000375329 CPSF1Q10570 1443 aaKnown RBP21.61■■□□□ 1.05
APOA1-205ENST00000375329 TMF1P82094 1093 aa21.6■■□□□ 1.05
APOA1-205ENST00000375329 SSH2Q76I76 1423 aa21.6■■□□□ 1.05
APOA1-205ENST00000375329 KIAA0232Q92628 1395 aa21.6■■□□□ 1.05
APOA1-205ENST00000375329 NINLQ9Y2I6 1382 aa21.6■■□□□ 1.05
APOA1-205ENST00000375329 TTC21BQ7Z4L5 1316 aa21.59■■□□□ 1.05
APOA1-205ENST00000375329 ZC3H6P61129 1189 aaKnown RBP21.59■■□□□ 1.05
APOA1-205ENST00000375329 CDCA8Q53HL2 280 aa21.59■■□□□ 1.05
APOA1-205ENST00000375329 GCP02774 474 aa21.58■■□□□ 1.05
APOA1-205ENST00000375329 CPDO75976 1380 aa21.58■■□□□ 1.04
APOA1-205ENST00000375329 NRAPQ86VF7 1730 aa21.55■■□□□ 1.04
APOA1-205ENST00000375329 KCNH5Q8NCM2 988 aa21.55■■□□□ 1.04
APOA1-205ENST00000375329 SLC12A5Q9H2X9 1139 aa21.55■■□□□ 1.04
APOA1-205ENST00000375329 GLI3P10071 1580 aa21.55■■□□□ 1.04
APOA1-205ENST00000375329 NRKQ7Z2Y5 1582 aa21.55■■□□□ 1.04
APOA1-205ENST00000375329 MON2Q7Z3U7 1717 aa21.55■■□□□ 1.04
APOA1-205ENST00000375329 ZEB1P37275 1124 aaPredicted RBP21.54■■□□□ 1.04
APOA1-205ENST00000375329 CHRNA2Q15822 529 aa21.54■■□□□ 1.04
APOA1-205ENST00000375329 ONECUT3O60422 494 aaPredicted RBP21.53■■□□□ 1.04
APOA1-205ENST00000375329 EVA1CP58658 441 aa21.53■■□□□ 1.04
APOA1-205ENST00000375329 PIK3C2AO00443 1686 aa21.53■■□□□ 1.04
APOA1-205ENST00000375329 SLIT3O75094 1523 aa21.51■■□□□ 1.03
APOA1-205ENST00000375329 EDC4Q6P2E9 1401 aaKnown RBP21.51■■□□□ 1.03
APOA1-205ENST00000375329 SPATA31A5Q5VU36 1347 aa21.51■■□□□ 1.03
APOA1-205ENST00000375329 SPATA31A7Q8IWB4 1347 aa21.51■■□□□ 1.03
APOA1-205ENST00000375329 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.5■■□□□ 1.03
APOA1-205ENST00000375329 SEPT12Q8IYM1 358 aa21.5■■□□□ 1.03
APOA1-205ENST00000375329 CD163L1Q9NR16 1453 aa21.5■■□□□ 1.03
APOA1-205ENST00000375329 STRN4Q9NRL3 753 aa21.49■■□□□ 1.03
APOA1-205ENST00000375329 A0A1W2PP64 1363 aa21.48■■□□□ 1.03
APOA1-205ENST00000375329 A0A0G2JS52 829 aa21.48■■□□□ 1.03
APOA1-205ENST00000375329 MYT1Q01538 1121 aa21.48■■□□□ 1.03
APOA1-205ENST00000375329 AATKQ6ZMQ8 1374 aa21.48■■□□□ 1.03
APOA1-205ENST00000375329 USP31Q70CQ4 1352 aa21.48■■□□□ 1.03
APOA1-205ENST00000375329 EIF4G2P78344 907 aaKnown RBP eCLIP21.47■■□□□ 1.03
APOA1-205ENST00000375329 ZBTB7CA1YPR0 619 aa21.46■■□□□ 1.03
APOA1-205ENST00000375329 FAM98CQ17RN3 349 aaKnown RBP21.46■■□□□ 1.03
APOA1-205ENST00000375329 CCDC125Q86Z20 511 aa21.46■■□□□ 1.03
APOA1-205ENST00000375329 LMO7Q8WWI1 1683 aa21.45■■□□□ 1.02
APOA1-205ENST00000375329 CAMTA1Q9Y6Y1 1673 aa21.45■■□□□ 1.02
APOA1-205ENST00000375329 SPATA31A1Q5TZJ5 1347 aa21.45■■□□□ 1.02
APOA1-205ENST00000375329 ANKRD36BQ8N2N9 1353 aa21.45■■□□□ 1.02
APOA1-205ENST00000375329 KRT27Q7Z3Y8 459 aa21.44■■□□□ 1.02
APOA1-205ENST00000375329 ARHGEF25Q86VW2 580 aa21.44■■□□□ 1.02
APOA1-205ENST00000375329 NME9Q86XW9 330 aa21.44■■□□□ 1.02
APOA1-205ENST00000375329 BRWD3Q6RI45 1802 aa21.43■■□□□ 1.02
APOA1-205ENST00000375329 USP54Q70EL1 1684 aa21.43■■□□□ 1.02
APOA1-205ENST00000375329 SOX12O15370 315 aa21.42■■□□□ 1.02
APOA1-205ENST00000375329 THRAP3Q9Y2W1 955 aaKnown RBP21.42■■□□□ 1.02
APOA1-205ENST00000375329 LARP1Q6PKG0 1096 aaKnown RBP21.41■■□□□ 1.02
APOA1-205ENST00000375329 BARGINQ6ZT62 677 aa21.41■■□□□ 1.02
APOA1-205ENST00000375329 COL5A2P05997 1499 aaPredicted RBP21.4■■□□□ 1.02
APOA1-205ENST00000375329 TCP11L2Q8N4U5 519 aa21.4■■□□□ 1.02
APOA1-205ENST00000375329 COG3Q96JB2 828 aa21.39■■□□□ 1.01
APOA1-205ENST00000375329 USP35Q9P2H5 1018 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms