RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 NUTM2GQ5VZR2 741 aa14.93□□□□□ -0.02
NPLOC4-202ENST00000374747 TPM2P07951 284 aa14.93□□□□□ -0.02
NPLOC4-202ENST00000374747 ZNF518AQ6AHZ1 1483 aa14.93□□□□□ -0.02
NPLOC4-202ENST00000374747 DIAPH3Q9NSV4 1193 aa14.93□□□□□ -0.02
NPLOC4-202ENST00000374747 ABCC2Q92887 1545 aa14.93□□□□□ -0.02
NPLOC4-202ENST00000374747 MARCH6O60337 910 aa14.92□□□□□ -0.02
NPLOC4-202ENST00000374747 RUFY2Q8WXA3 655 aa14.92□□□□□ -0.02
NPLOC4-202ENST00000374747 TSPYL4Q9UJ04 414 aa14.92□□□□□ -0.02
NPLOC4-202ENST00000374747 SMG6Q86US8 1419 aaKnown RBP14.92□□□□□ -0.02
NPLOC4-202ENST00000374747 AAMPQ13685 434 aa14.91□□□□□ -0.02
NPLOC4-202ENST00000374747 MCTP1Q6DN14 999 aa14.91□□□□□ -0.02
NPLOC4-202ENST00000374747 ADGRF5Q8IZF2 1346 aa14.91□□□□□ -0.02
NPLOC4-202ENST00000374747 MBD5Q9P267 1494 aa14.91□□□□□ -0.02
NPLOC4-202ENST00000374747 NUCB2P80303 420 aa14.91□□□□□ -0.02
NPLOC4-202ENST00000374747 ZKSCAN1P17029 563 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-202ENST00000374747 NEXNQ0ZGT2 675 aa14.91□□□□□ -0.02
NPLOC4-202ENST00000374747 FBXO31Q5XUX0 539 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-202ENST00000374747 GAS2L2Q8NHY3 880 aa14.91□□□□□ -0.02
NPLOC4-202ENST00000374747 A2MP01023 1474 aa14.91□□□□□ -0.02
NPLOC4-202ENST00000374747 SHANK2Q9UPX8 1470 aa14.91□□□□□ -0.02
NPLOC4-202ENST00000374747 IPO7O95373 1038 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-202ENST00000374747 EIF2S2P20042 333 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-202ENST00000374747 HOMER1Q86YM7 354 aa14.9□□□□□ -0.02
NPLOC4-202ENST00000374747 CCDC61Q9Y6R9 512 aa14.9□□□□□ -0.02
NPLOC4-202ENST00000374747 PRKAR2BP31323 418 aa14.9□□□□□ -0.02
NPLOC4-202ENST00000374747 AKAP17AQ02040 695 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-202ENST00000374747 CPLX2Q6PUV4 134 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-202ENST00000374747 TMX4Q9H1E5 349 aaPredicted RBP14.9□□□□□ -0.02
NPLOC4-202ENST00000374747 NLRP2Q9NX02 1062 aa14.9□□□□□ -0.02
NPLOC4-202ENST00000374747 RNF123Q5XPI4 1314 aa14.89□□□□□ -0.03
NPLOC4-202ENST00000374747 NFKBIBQ15653 356 aa14.89□□□□□ -0.03
NPLOC4-202ENST00000374747 SCAF11Q99590 1463 aaKnown RBP14.89□□□□□ -0.03
NPLOC4-202ENST00000374747 DDX58O95786 925 aaKnown RBP14.88□□□□□ -0.03
NPLOC4-202ENST00000374747 TRAPPC8Q9Y2L5 1435 aa14.88□□□□□ -0.03
NPLOC4-202ENST00000374747 PER1O15534 1290 aaPredicted RBP14.88□□□□□ -0.03
NPLOC4-202ENST00000374747 BICD2Q8TD16 824 aa14.88□□□□□ -0.03
NPLOC4-202ENST00000374747 NOS1P29475 1434 aa14.88□□□□□ -0.03
NPLOC4-202ENST00000374747 MRE11P49959 708 aa14.88□□□□□ -0.03
NPLOC4-202ENST00000374747 NUDT16Q96DE0 195 aaKnown RBP14.88□□□□□ -0.03
NPLOC4-202ENST00000374747 ABCC10Q5T3U5 1492 aa14.88□□□□□ -0.03
NPLOC4-202ENST00000374747 NSD3Q9BZ95 1437 aa14.88□□□□□ -0.03
NPLOC4-202ENST00000374747 SYNE3Q6ZMZ3 975 aa14.87□□□□□ -0.03
NPLOC4-202ENST00000374747 C14orf93Q9H972 538 aaKnown RBP14.87□□□□□ -0.03
NPLOC4-202ENST00000374747 ANKRD20A12PQ8NF67 263 aa14.87□□□□□ -0.03
NPLOC4-202ENST00000374747 PRM3Q9NNZ6 103 aa14.87□□□□□ -0.03
NPLOC4-202ENST00000374747 ARGLU1Q9NWB6 273 aaPredicted RBP14.87□□□□□ -0.03
NPLOC4-202ENST00000374747 CEP170Q5SW79 1584 aa14.87□□□□□ -0.03
NPLOC4-202ENST00000374747 LRRFIP1Q32MZ4 808 aaKnown RBP14.87□□□□□ -0.03
NPLOC4-202ENST00000374747 MTERF4Q7Z6M4 381 aaKnown RBP14.87□□□□□ -0.03
NPLOC4-202ENST00000374747 FRAT2O75474 233 aaPredicted RBP14.86□□□□□ -0.03
NPLOC4-202ENST00000374747 FKBP5Q13451 457 aaPredicted RBP14.86□□□□□ -0.03
NPLOC4-202ENST00000374747 ANO2Q9NQ90 1003 aa14.86□□□□□ -0.03
NPLOC4-202ENST00000374747 MAP7D2Q96T17 732 aa14.86□□□□□ -0.03
NPLOC4-202ENST00000374747 TRIM29Q14134 588 aa14.85□□□□□ -0.03
NPLOC4-202ENST00000374747 C9orf78Q9NZ63 289 aaPredicted RBP14.85□□□□□ -0.03
NPLOC4-202ENST00000374747 ADGRL2O95490 1459 aa14.85□□□□□ -0.03
NPLOC4-202ENST00000374747 PLEKHO1Q53GL0 409 aaPredicted RBP14.85□□□□□ -0.03
NPLOC4-202ENST00000374747 INTS3Q68E01 1043 aaKnown RBP14.85□□□□□ -0.03
NPLOC4-202ENST00000374747 C22orf23Q9BZE7 217 aa14.85□□□□□ -0.03
NPLOC4-202ENST00000374747 VPS53Q5VIR6 699 aa14.85□□□□□ -0.03
NPLOC4-202ENST00000374747 SASS6Q6UVJ0 657 aa14.85□□□□□ -0.03
NPLOC4-202ENST00000374747 GTF2E1P29083 439 aaPredicted RBP14.85□□□□□ -0.03
NPLOC4-202ENST00000374747 HOOK1Q9UJC3 728 aaKnown RBP14.85□□□□□ -0.03
NPLOC4-202ENST00000374747 TESK2Q96S53 571 aa14.84□□□□□ -0.03
NPLOC4-202ENST00000374747 IFT57Q9NWB7 429 aa14.84□□□□□ -0.03
NPLOC4-202ENST00000374747 WAPLQ7Z5K2 1190 aa14.84□□□□□ -0.03
NPLOC4-202ENST00000374747 CCDC39Q9UFE4 941 aa14.84□□□□□ -0.03
NPLOC4-202ENST00000374747 RNF20Q5VTR2 975 aa14.84□□□□□ -0.03
NPLOC4-202ENST00000374747 WDR63Q8IWG1 891 aa14.83□□□□□ -0.03
NPLOC4-202ENST00000374747 MNS1Q8NEH6 495 aa14.83□□□□□ -0.03
NPLOC4-202ENST00000374747 SMC3Q9UQE7 1217 aa14.83□□□□□ -0.03
NPLOC4-202ENST00000374747 NASPP49321 788 aaPredicted RBP14.83□□□□□ -0.04
NPLOC4-202ENST00000374747 NECTIN2Q92692 538 aa14.83□□□□□ -0.04
NPLOC4-202ENST00000374747 VPS37CA5D8V6 355 aaPredicted RBP14.83□□□□□ -0.04
NPLOC4-202ENST00000374747 LRPPRCP42704 1394 aaKnown RBP14.83□□□□□ -0.04
NPLOC4-202ENST00000374747 PCMTD1Q96MG8 357 aaPredicted RBP14.83□□□□□ -0.04
NPLOC4-202ENST00000374747 PATL2C9JE40 543 aaKnown RBP14.83□□□□□ -0.04
NPLOC4-202ENST00000374747 CPLX1O14810 134 aa14.83□□□□□ -0.04
NPLOC4-202ENST00000374747 CCDC47Q96A33 483 aaKnown RBP14.83□□□□□ -0.04
NPLOC4-202ENST00000374747 ACBD3Q9H3P7 528 aa14.83□□□□□ -0.04
NPLOC4-202ENST00000374747 KDM5CP41229 1560 aa14.83□□□□□ -0.04
NPLOC4-202ENST00000374747 NOM1Q5C9Z4 860 aaKnown RBP14.82□□□□□ -0.04
NPLOC4-202ENST00000374747 SULT6B1Q6IMI4 303 aa14.82□□□□□ -0.04
NPLOC4-202ENST00000374747 R3HCC1Q9Y3T6 440 aaKnown RBP14.82□□□□□ -0.04
NPLOC4-202ENST00000374747 RALGAPBQ86X10 1494 aa14.82□□□□□ -0.04
NPLOC4-202ENST00000374747 UHRF1BP1Q6BDS2 1440 aa14.81□□□□□ -0.04
NPLOC4-202ENST00000374747 IFIT2P09913 472 aaKnown RBP14.81□□□□□ -0.04
NPLOC4-202ENST00000374747 CT47B1P0C2W7 299 aaPredicted RBP14.81□□□□□ -0.04
NPLOC4-202ENST00000374747 TNRQ92752 1358 aa14.81□□□□□ -0.04
NPLOC4-202ENST00000374747 FCHSD2O94868 740 aa14.8□□□□□ -0.04
NPLOC4-202ENST00000374747 AEBP2Q6ZN18 517 aaPredicted RBP14.8□□□□□ -0.04
NPLOC4-202ENST00000374747 CCDC73Q6ZRK6 1079 aa14.8□□□□□ -0.04
NPLOC4-202ENST00000374747 CEBPAP49715 358 aaPredicted RBP14.8□□□□□ -0.04
NPLOC4-202ENST00000374747 EXOSC9Q06265 439 aaKnown RBP14.8□□□□□ -0.04
NPLOC4-202ENST00000374747 PLA2R1Q13018 1463 aa14.8□□□□□ -0.04
NPLOC4-202ENST00000374747 DISP3Q9P2K9 1392 aa14.8□□□□□ -0.04
NPLOC4-202ENST00000374747 G3V3G9 751 aa14.8□□□□□ -0.04
NPLOC4-202ENST00000374747 DCAF8Q5TAQ9 597 aa14.8□□□□□ -0.04
NPLOC4-202ENST00000374747 RUFY1Q96T51 708 aa14.79□□□□□ -0.04
NPLOC4-202ENST00000374747 WASLO00401 505 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms