RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 NFKBIBQ15653 356 aa16.89■□□□□ 0.3
CLIC4-201ENST00000374379 NFE2L2Q16236 605 aa16.89■□□□□ 0.3
CLIC4-201ENST00000374379 TRIM27P14373 513 aa16.89■□□□□ 0.29
CLIC4-201ENST00000374379 FOXD4L5Q5VV16 416 aaPredicted RBP16.89■□□□□ 0.29
CLIC4-201ENST00000374379 FOXD4L4Q8WXT5 416 aaPredicted RBP16.89■□□□□ 0.29
CLIC4-201ENST00000374379 RILPL2Q969X0 211 aa16.89■□□□□ 0.29
CLIC4-201ENST00000374379 ZCCHC11Q5TAX3 1644 aaKnown RBP16.89■□□□□ 0.29
CLIC4-201ENST00000374379 ZNF692Q9BU19 519 aaPredicted RBP16.89■□□□□ 0.29
CLIC4-201ENST00000374379 C22orf23Q9BZE7 217 aa16.88■□□□□ 0.29
CLIC4-201ENST00000374379 PCDHB15Q9Y5E8 787 aa16.88■□□□□ 0.29
CLIC4-201ENST00000374379 ANKRD36BQ8N2N9 1353 aa16.88■□□□□ 0.29
CLIC4-201ENST00000374379 A0A1W2PP64 1363 aa16.87■□□□□ 0.29
CLIC4-201ENST00000374379 ABCC1P33527 1531 aa16.87■□□□□ 0.29
CLIC4-201ENST00000374379 SLC4A2P04920 1241 aa16.87■□□□□ 0.29
CLIC4-201ENST00000374379 AMOTL2Q9Y2J4 779 aa16.87■□□□□ 0.29
CLIC4-201ENST00000374379 THEMISQ8N1K5 641 aaPredicted RBP16.87■□□□□ 0.29
CLIC4-201ENST00000374379 KDM5DQ9BY66 1539 aa16.86■□□□□ 0.29
CLIC4-201ENST00000374379 YEATS2Q9ULM3 1422 aa16.86■□□□□ 0.29
CLIC4-201ENST00000374379 FRAT2O75474 233 aaPredicted RBP16.86■□□□□ 0.29
CLIC4-201ENST00000374379 ADCY10Q96PN6 1610 aa16.85■□□□□ 0.29
CLIC4-201ENST00000374379 CDC42BPBQ9Y5S2 1711 aa16.85■□□□□ 0.29
CLIC4-201ENST00000374379 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
CLIC4-201ENST00000374379 USHBP1Q8N6Y0 703 aa16.84■□□□□ 0.29
CLIC4-201ENST00000374379 POLKQ9UBT6 870 aa16.84■□□□□ 0.29
CLIC4-201ENST00000374379 RNF123Q5XPI4 1314 aa16.84■□□□□ 0.29
CLIC4-201ENST00000374379 PHACTR3Q96KR7 559 aa16.84■□□□□ 0.29
CLIC4-201ENST00000374379 PIK3C2GO75747 1445 aa16.84■□□□□ 0.29
CLIC4-201ENST00000374379 AEBP1Q8IUX7 1158 aa16.84■□□□□ 0.29
CLIC4-201ENST00000374379 HSP90AB2PQ58FF8 381 aa16.83■□□□□ 0.29
CLIC4-201ENST00000374379 POLR3AO14802 1390 aaPredicted RBP16.83■□□□□ 0.28
CLIC4-201ENST00000374379 FOXD4L6Q3SYB3 417 aaPredicted RBP16.83■□□□□ 0.28
CLIC4-201ENST00000374379 C1orf141Q5JVX7 400 aa16.83■□□□□ 0.28
CLIC4-201ENST00000374379 FOXD4L3Q6VB84 417 aaPredicted RBP16.83■□□□□ 0.28
CLIC4-201ENST00000374379 CHMP3Q9Y3E7 222 aa16.82■□□□□ 0.28
CLIC4-201ENST00000374379 POGZQ7Z3K3 1410 aa16.82■□□□□ 0.28
CLIC4-201ENST00000374379 TRIM44Q96DX7 344 aaPredicted RBP16.82■□□□□ 0.28
CLIC4-201ENST00000374379 ACEP12821 1306 aa16.82■□□□□ 0.28
CLIC4-201ENST00000374379 UHRF1BP1LA0JNW5 1464 aa16.82■□□□□ 0.28
CLIC4-201ENST00000374379 PTPRTO14522 1441 aa16.81■□□□□ 0.28
CLIC4-201ENST00000374379 GSE1Q14687 1217 aa16.81■□□□□ 0.28
CLIC4-201ENST00000374379 AIMP1Q12904 312 aaKnown RBP16.8■□□□□ 0.28
CLIC4-201ENST00000374379 NAP1L2Q9ULW6 460 aaPredicted RBP16.8■□□□□ 0.28
CLIC4-201ENST00000374379 USP35Q9P2H5 1018 aa16.79■□□□□ 0.28
CLIC4-201ENST00000374379 MCCP23508 829 aa16.79■□□□□ 0.28
CLIC4-201ENST00000374379 KRT24Q2M2I5 525 aa16.79■□□□□ 0.28
CLIC4-201ENST00000374379 NLRP2Q9NX02 1062 aa16.79■□□□□ 0.28
CLIC4-201ENST00000374379 RIMS2Q9UQ26 1411 aa16.79■□□□□ 0.28
CLIC4-201ENST00000374379 F6X3S4 739 aa16.79■□□□□ 0.28
CLIC4-201ENST00000374379 AAMPQ13685 434 aa16.78■□□□□ 0.28
CLIC4-201ENST00000374379 TSPYL6Q8N831 410 aa16.78■□□□□ 0.28
CLIC4-201ENST00000374379 MBIPQ9NS73 344 aa16.78■□□□□ 0.28
CLIC4-201ENST00000374379 KIAA1211Q6ZU35 1233 aa16.78■□□□□ 0.28
CLIC4-201ENST00000374379 CT47B1P0C2W7 299 aaPredicted RBP16.78■□□□□ 0.28
CLIC4-201ENST00000374379 YTHDC2Q9H6S0 1430 aaKnown RBP16.78■□□□□ 0.28
CLIC4-201ENST00000374379 FGD1P98174 961 aa16.77■□□□□ 0.28
CLIC4-201ENST00000374379 CHD1LQ86WJ1 897 aa16.77■□□□□ 0.27
CLIC4-201ENST00000374379 PROSER2Q86WR7 435 aaPredicted RBP16.77■□□□□ 0.27
CLIC4-201ENST00000374379 C9orf78Q9NZ63 289 aaPredicted RBP16.77■□□□□ 0.27
CLIC4-201ENST00000374379 ERVK-7P63135 1459 aa16.76■□□□□ 0.27
CLIC4-201ENST00000374379 PRDM15P57071 1507 aaPredicted RBP16.76■□□□□ 0.27
CLIC4-201ENST00000374379 CROCC2H7BZ55 1655 aa16.76■□□□□ 0.27
CLIC4-201ENST00000374379 NSD2O96028 1365 aa16.76■□□□□ 0.27
CLIC4-201ENST00000374379 PLCB2Q00722 1185 aa16.76■□□□□ 0.27
CLIC4-201ENST00000374379 GAS2L2Q8NHY3 880 aa16.76■□□□□ 0.27
CLIC4-201ENST00000374379 FOXO3O43524 673 aa16.76■□□□□ 0.27
CLIC4-201ENST00000374379 ZFYVE16Q7Z3T8 1539 aa16.76■□□□□ 0.27
CLIC4-201ENST00000374379 GBP4Q96PP9 640 aa16.76■□□□□ 0.27
CLIC4-201ENST00000374379 BLMP54132 1417 aaPredicted RBP16.75■□□□□ 0.27
CLIC4-201ENST00000374379 PPIP5K1Q6PFW1 1433 aa16.75■□□□□ 0.27
CLIC4-201ENST00000374379 TNRQ92752 1358 aa16.75■□□□□ 0.27
CLIC4-201ENST00000374379 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
CLIC4-201ENST00000374379 ZC3H6P61129 1189 aaKnown RBP16.74■□□□□ 0.27
CLIC4-201ENST00000374379 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
CLIC4-201ENST00000374379 C8orf58Q8NAV2 365 aa16.74■□□□□ 0.27
CLIC4-201ENST00000374379 SMARCA5O60264 1052 aaPredicted RBP16.74■□□□□ 0.27
CLIC4-201ENST00000374379 ANO2Q9NQ90 1003 aa16.74■□□□□ 0.27
CLIC4-201ENST00000374379 TRPM2O94759 1503 aa16.74■□□□□ 0.27
CLIC4-201ENST00000374379 ZMYM3Q14202 1370 aa16.74■□□□□ 0.27
CLIC4-201ENST00000374379 ANKLE2Q86XL3 938 aa16.74■□□□□ 0.27
CLIC4-201ENST00000374379 SEC24BO95487 1268 aa16.73■□□□□ 0.27
CLIC4-201ENST00000374379 ZMYM4Q5VZL5 1548 aa16.73■□□□□ 0.27
CLIC4-201ENST00000374379 C8orf34Q49A92 452 aa16.73■□□□□ 0.27
CLIC4-201ENST00000374379 NPC1L1Q9UHC9 1359 aa16.73■□□□□ 0.27
CLIC4-201ENST00000374379 IFT57Q9NWB7 429 aa16.72■□□□□ 0.27
CLIC4-201ENST00000374379 EXOC6BQ9Y2D4 811 aa16.72■□□□□ 0.27
CLIC4-201ENST00000374379 UBTFL1P0CB47 393 aaPredicted RBP16.72■□□□□ 0.27
CLIC4-201ENST00000374379 TTC21BQ7Z4L5 1316 aa16.71■□□□□ 0.27
CLIC4-201ENST00000374379 ZNF530Q6P9A1 599 aaPredicted RBP16.71■□□□□ 0.27
CLIC4-201ENST00000374379 TRIM35Q9UPQ4 493 aa16.71■□□□□ 0.27
CLIC4-201ENST00000374379 CCDC30Q5VVM6 783 aa16.71■□□□□ 0.27
CLIC4-201ENST00000374379 ABCC11Q96J66 1382 aa16.71■□□□□ 0.27
CLIC4-201ENST00000374379 SURF6O75683 361 aaKnown RBP16.71■□□□□ 0.26
CLIC4-201ENST00000374379 RAPGEF4Q8WZA2 1011 aa16.71■□□□□ 0.26
CLIC4-201ENST00000374379 EIF4A2Q14240 407 aaKnown RBP16.7■□□□□ 0.26
CLIC4-201ENST00000374379 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
CLIC4-201ENST00000374379 ST18O60284 1047 aa16.7■□□□□ 0.26
CLIC4-201ENST00000374379 ATF3P18847 181 aa16.7■□□□□ 0.26
CLIC4-201ENST00000374379 GCC1Q96CN9 775 aa16.7■□□□□ 0.26
CLIC4-201ENST00000374379 IQGAP3Q86VI3 1631 aa16.7■□□□□ 0.26
CLIC4-201ENST00000374379 PPP6R1Q9UPN7 881 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms