RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 U2SURPO15042 1029 aaKnown RBP26.25■■□□□ 1.79
SRSF4-201ENST00000373795 NGEFQ8N5V2 710 aa26.24■■□□□ 1.79
SRSF4-201ENST00000373795 CPSF1Q10570 1443 aaKnown RBP26.24■■□□□ 1.79
SRSF4-201ENST00000373795 E9PSI1 815 aa26.24■■□□□ 1.79
SRSF4-201ENST00000373795 ZRANB1Q9UGI0 708 aa26.23■■□□□ 1.79
SRSF4-201ENST00000373795 SLIT1O75093 1534 aa26.23■■□□□ 1.79
SRSF4-201ENST00000373795 ANP32AP39687 249 aaKnown RBP26.22■■□□□ 1.79
SRSF4-201ENST00000373795 C20orf194Q5TEA3 1177 aa26.22■■□□□ 1.79
SRSF4-201ENST00000373795 NME9Q86XW9 330 aa26.22■■□□□ 1.79
SRSF4-201ENST00000373795 AMOTL2Q9Y2J4 779 aa26.22■■□□□ 1.79
SRSF4-201ENST00000373795 ARHGAP23Q9P227 1491 aa26.22■■□□□ 1.79
SRSF4-201ENST00000373795 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.22■■□□□ 1.79
SRSF4-201ENST00000373795 PPM1GO15355 546 aaPredicted RBP26.21■■□□□ 1.79
SRSF4-201ENST00000373795 COL3A1P02461 1466 aaPredicted RBP26.2■■□□□ 1.78
SRSF4-201ENST00000373795 IQSEC2Q5JU85 1478 aa26.2■■□□□ 1.78
SRSF4-201ENST00000373795 IPO9Q96P70 1041 aaKnown RBP26.19■■□□□ 1.78
SRSF4-201ENST00000373795 CRBNQ96SW2 442 aa26.19■■□□□ 1.78
SRSF4-201ENST00000373795 POLKQ9UBT6 870 aa26.19■■□□□ 1.78
SRSF4-201ENST00000373795 TBX22Q9Y458 520 aa26.19■■□□□ 1.78
SRSF4-201ENST00000373795 NKTRP30414 1462 aaKnown RBP26.18■■□□□ 1.78
SRSF4-201ENST00000373795 EDC4Q6P2E9 1401 aaKnown RBP26.17■■□□□ 1.78
SRSF4-201ENST00000373795 PHF23Q9BUL5 403 aaPredicted RBP26.17■■□□□ 1.78
SRSF4-201ENST00000373795 DIAPH1O60610 1272 aaKnown RBP26.17■■□□□ 1.78
SRSF4-201ENST00000373795 TCERG1O14776 1098 aaKnown RBP26.16■■□□□ 1.78
SRSF4-201ENST00000373795 PLEKHF1Q96S99 279 aa26.15■■□□□ 1.78
SRSF4-201ENST00000373795 PNPLA6Q8IY17 1366 aa26.15■■□□□ 1.78
SRSF4-201ENST00000373795 CDC42BPGQ6DT37 1551 aa26.14■■□□□ 1.78
SRSF4-201ENST00000373795 BCAR3O75815 825 aa26.14■■□□□ 1.78
SRSF4-201ENST00000373795 MAP2P11137 1827 aaKnown RBP26.14■■□□□ 1.78
SRSF4-201ENST00000373795 RIMS1Q86UR5 1692 aaKnown RBP26.13■■□□□ 1.77
SRSF4-201ENST00000373795 EMILIN1Q9Y6C2 1016 aa26.13■■□□□ 1.77
SRSF4-201ENST00000373795 ZNF692Q9BU19 519 aaPredicted RBP26.12■■□□□ 1.77
SRSF4-201ENST00000373795 CCDC27Q2M243 656 aa26.11■■□□□ 1.77
SRSF4-201ENST00000373795 WDR63Q8IWG1 891 aa26.11■■□□□ 1.77
SRSF4-201ENST00000373795 ACEP12821 1306 aa26.1■■□□□ 1.77
SRSF4-201ENST00000373795 PDE4AP27815 886 aa26.1■■□□□ 1.77
SRSF4-201ENST00000373795 MON2Q7Z3U7 1717 aa26.09■■□□□ 1.77
SRSF4-201ENST00000373795 COG3Q96JB2 828 aa26.09■■□□□ 1.77
SRSF4-201ENST00000373795 AKAP12Q02952 1782 aa26.09■■□□□ 1.77
SRSF4-201ENST00000373795 ADGRB2O60241 1585 aa26.08■■□□□ 1.77
SRSF4-201ENST00000373795 NBR1Q14596 966 aa26.08■■□□□ 1.77
SRSF4-201ENST00000373795 NPM2Q86SE8 214 aaKnown RBP26.08■■□□□ 1.77
SRSF4-201ENST00000373795 SKAP1Q86WV1 359 aa26.08■■□□□ 1.77
SRSF4-201ENST00000373795 ZBTB47Q9UFB7 747 aaPredicted RBP26.08■■□□□ 1.77
SRSF4-201ENST00000373795 CEP170BQ9Y4F5 1589 aaPredicted RBP26.08■■□□□ 1.76
SRSF4-201ENST00000373795 RRS1Q15050 365 aaKnown RBP26.07■■□□□ 1.76
SRSF4-201ENST00000373795 ITSN1Q15811 1721 aa26.07■■□□□ 1.76
SRSF4-201ENST00000373795 TMPOP42166 694 aaKnown RBP26.07■■□□□ 1.76
SRSF4-201ENST00000373795 PLEKHG3A1L390 1219 aa26.06■■□□□ 1.76
SRSF4-201ENST00000373795 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.06■■□□□ 1.76
SRSF4-201ENST00000373795 MAPK8IP3Q9UPT6 1336 aa26.06■■□□□ 1.76
SRSF4-201ENST00000373795 KCNA6P17658 529 aa26.05■■□□□ 1.76
SRSF4-201ENST00000373795 PMFBP1Q8TBY8 1022 aa26.05■■□□□ 1.76
SRSF4-201ENST00000373795 BACH2Q9BYV9 841 aa26.05■■□□□ 1.76
SRSF4-201ENST00000373795 MS4A1P11836 297 aa26.04■■□□□ 1.76
SRSF4-201ENST00000373795 BCL11AQ9H165 835 aa26.04■■□□□ 1.76
SRSF4-201ENST00000373795 TRIM35Q9UPQ4 493 aa26.04■■□□□ 1.76
SRSF4-201ENST00000373795 TTC21BQ7Z4L5 1316 aa26.04■■□□□ 1.76
SRSF4-201ENST00000373795 PTCH1Q13635 1447 aa26.02■■□□□ 1.76
SRSF4-201ENST00000373795 HMOX1P09601 288 aa26.02■■□□□ 1.76
SRSF4-201ENST00000373795 NCBP3Q53F19 620 aaKnown RBP26.02■■□□□ 1.76
SRSF4-201ENST00000373795 FCHSD2O94868 740 aa26.01■■□□□ 1.75
SRSF4-201ENST00000373795 RIPK4P57078 832 aa26.01■■□□□ 1.75
SRSF4-201ENST00000373795 DNAJC5Q9H3Z4 198 aa26.01■■□□□ 1.75
SRSF4-201ENST00000373795 TOPAZ1Q8N9V7 1692 aa26.01■■□□□ 1.75
SRSF4-201ENST00000373795 PRKAR2BP31323 418 aa26■■□□□ 1.75
SRSF4-201ENST00000373795 AATKQ6ZMQ8 1374 aa26■■□□□ 1.75
SRSF4-201ENST00000373795 IL13P35225 146 aa25.99■■□□□ 1.75
SRSF4-201ENST00000373795 RSPH6AQ9H0K4 717 aa25.99■■□□□ 1.75
SRSF4-201ENST00000373795 DIP2AQ14689 1571 aa25.99■■□□□ 1.75
SRSF4-201ENST00000373795 RGPD8O14715 1765 aaPredicted RBP25.99■■□□□ 1.75
SRSF4-201ENST00000373795 ANKLE2Q86XL3 938 aa25.99■■□□□ 1.75
SRSF4-201ENST00000373795 TSR2Q969E8 191 aaKnown RBP25.98■■□□□ 1.75
SRSF4-201ENST00000373795 PHACTR3Q96KR7 559 aa25.97■■□□□ 1.75
SRSF4-201ENST00000373795 PNNQ9H307 717 aaKnown RBP25.97■■□□□ 1.75
SRSF4-201ENST00000373795 MYH16Q9H6N6 1097 aa25.97■■□□□ 1.75
SRSF4-201ENST00000373795 USP6P35125 1406 aa25.97■■□□□ 1.75
SRSF4-201ENST00000373795 RARSP54136 660 aaKnown RBP25.97■■□□□ 1.75
SRSF4-201ENST00000373795 RBM33Q96EV2 1170 aaKnown RBP25.96■■□□□ 1.75
SRSF4-201ENST00000373795 ADAMTSL3P82987 1691 aa25.96■■□□□ 1.75
SRSF4-201ENST00000373795 LRRC7Q96NW7 1537 aa25.96■■□□□ 1.75
SRSF4-201ENST00000373795 XRN1Q8IZH2 1706 aaKnown RBP25.95■■□□□ 1.75
SRSF4-201ENST00000373795 BCL2L13Q9BXK5 485 aa25.95■■□□□ 1.74
SRSF4-201ENST00000373795 FRAT1Q92837 279 aaPredicted RBP25.95■■□□□ 1.74
SRSF4-201ENST00000373795 KDM2BQ8NHM5 1336 aa25.94■■□□□ 1.74
SRSF4-201ENST00000373795 SOX12O15370 315 aa25.94■■□□□ 1.74
SRSF4-201ENST00000373795 NGDNQ8NEJ9 315 aaKnown RBP25.94■■□□□ 1.74
SRSF4-201ENST00000373795 NRKQ7Z2Y5 1582 aa25.94■■□□□ 1.74
SRSF4-201ENST00000373795 DEKP35659 375 aaKnown RBP25.93■■□□□ 1.74
SRSF4-201ENST00000373795 CDK12Q9NYV4 1490 aaPredicted RBP25.93■■□□□ 1.74
SRSF4-201ENST00000373795 CANXP27824 592 aaKnown RBP25.91■■□□□ 1.74
SRSF4-201ENST00000373795 SETD1BQ9UPS6 1966 aaKnown RBP25.91■■□□□ 1.74
SRSF4-201ENST00000373795 PANK1Q8TE04 598 aa25.91■■□□□ 1.74
SRSF4-201ENST00000373795 SSH2Q76I76 1423 aa25.9■■□□□ 1.74
SRSF4-201ENST00000373795 PIK3R4Q99570 1358 aa25.9■■□□□ 1.74
SRSF4-201ENST00000373795 OVOS2A0A0J9YW53 1432 aa25.89■■□□□ 1.74
SRSF4-201ENST00000373795 OVOS2Q6IE36 1432 aa25.89■■□□□ 1.74
SRSF4-201ENST00000373795 EXOSC9Q06265 439 aaKnown RBP25.89■■□□□ 1.74
SRSF4-201ENST00000373795 NEFMP07197 916 aa25.89■■□□□ 1.73
SRSF4-201ENST00000373795 CENPQQ7L2Z9 268 aaPredicted RBP25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms