RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 CCDC82Q8N4S0 544 aa8.44□□□□□ -1.06
CHD6-202ENST00000373222 GPBP1L1Q9HC44 474 aaPredicted RBP8.44□□□□□ -1.06
CHD6-202ENST00000373222 RTEL1-TNFRSF6BF6WH68 1400 aa8.43□□□□□ -1.06
CHD6-202ENST00000373222 CRBNQ96SW2 442 aa8.43□□□□□ -1.06
CHD6-202ENST00000373222 VWDEQ8N2E2 1590 aa8.43□□□□□ -1.06
CHD6-202ENST00000373222 KIF1BO60333 1816 aa8.43□□□□□ -1.06
CHD6-202ENST00000373222 GGT6Q6P531 493 aa8.43□□□□□ -1.06
CHD6-202ENST00000373222 CARD14Q9BXL6 1004 aa8.43□□□□□ -1.06
CHD6-202ENST00000373222 TNNT2P45379 298 aaPredicted RBP8.42□□□□□ -1.06
CHD6-202ENST00000373222 TMEM132EQ6IEE7 984 aa8.42□□□□□ -1.06
CHD6-202ENST00000373222 RNF25Q96BH1 459 aaPredicted RBP8.42□□□□□ -1.06
CHD6-202ENST00000373222 CIZ1Q9ULV3 898 aaPredicted RBP8.42□□□□□ -1.06
CHD6-202ENST00000373222 ZMYM4Q5VZL5 1548 aa8.42□□□□□ -1.06
CHD6-202ENST00000373222 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.42□□□□□ -1.06
CHD6-202ENST00000373222 ERVK-7P63135 1459 aa8.42□□□□□ -1.06
CHD6-202ENST00000373222 MAP3K4Q9Y6R4 1608 aa8.42□□□□□ -1.06
CHD6-202ENST00000373222 TRAK1Q9UPV9 953 aa8.41□□□□□ -1.06
CHD6-202ENST00000373222 SYNMO15061 1565 aa8.41□□□□□ -1.06
CHD6-202ENST00000373222 KDM5AP29375 1690 aaKnown RBP8.41□□□□□ -1.06
CHD6-202ENST00000373222 KANK1Q14678 1352 aa8.41□□□□□ -1.06
CHD6-202ENST00000373222 ARAP3Q8WWN8 1544 aa8.41□□□□□ -1.06
CHD6-202ENST00000373222 IFT172Q9UG01 1749 aa8.41□□□□□ -1.06
CHD6-202ENST00000373222 WASHC2CQ9Y4E1 1318 aa8.41□□□□□ -1.06
CHD6-202ENST00000373222 EFCAB6Q5THR3 1501 aa8.4□□□□□ -1.06
CHD6-202ENST00000373222 ASXL1Q8IXJ9 1541 aa8.4□□□□□ -1.06
CHD6-202ENST00000373222 NOS1P29475 1434 aa8.4□□□□□ -1.06
CHD6-202ENST00000373222 WDR43Q15061 677 aaKnown RBP eCLIP8.4□□□□□ -1.06
CHD6-202ENST00000373222 AEBP1Q8IUX7 1158 aa8.4□□□□□ -1.06
CHD6-202ENST00000373222 HS3ST6Q96QI5 342 aa8.4□□□□□ -1.06
CHD6-202ENST00000373222 RAPGEF3O95398 923 aa8.4□□□□□ -1.07
CHD6-202ENST00000373222 DUSP27Q5VZP5 1158 aa8.4□□□□□ -1.07
CHD6-202ENST00000373222 APAF1O14727 1248 aa8.39□□□□□ -1.07
CHD6-202ENST00000373222 PDE3BQ13370 1112 aa8.39□□□□□ -1.07
CHD6-202ENST00000373222 TRAIPQ9BWF2 469 aa8.39□□□□□ -1.07
CHD6-202ENST00000373222 FRMPD1Q5SYB0 1578 aa8.39□□□□□ -1.07
CHD6-202ENST00000373222 SIGLEC1Q9BZZ2 1709 aa8.38□□□□□ -1.07
CHD6-202ENST00000373222 SAFB2Q14151 953 aaKnown RBP eCLIP8.38□□□□□ -1.07
CHD6-202ENST00000373222 DHX37Q8IY37 1157 aaKnown RBP8.38□□□□□ -1.07
CHD6-202ENST00000373222 SLC12A5Q9H2X9 1139 aa8.38□□□□□ -1.07
CHD6-202ENST00000373222 NOP58Q9Y2X3 529 aaKnown RBP8.38□□□□□ -1.07
CHD6-202ENST00000373222 NPATQ14207 1427 aa8.38□□□□□ -1.07
CHD6-202ENST00000373222 RNF166Q96A37 237 aaPredicted RBP8.38□□□□□ -1.07
CHD6-202ENST00000373222 KIAA1210Q9ULL0 1709 aa8.37□□□□□ -1.07
CHD6-202ENST00000373222 ZNF521Q96K83 1311 aa8.37□□□□□ -1.07
CHD6-202ENST00000373222 ZMYND10O75800 440 aa8.37□□□□□ -1.07
CHD6-202ENST00000373222 BCAR3O75815 825 aa8.37□□□□□ -1.07
CHD6-202ENST00000373222 MFAP1P55081 439 aaKnown RBP8.37□□□□□ -1.07
CHD6-202ENST00000373222 TMCO4Q5TGY1 634 aa8.37□□□□□ -1.07
CHD6-202ENST00000373222 RRP7AQ9Y3A4 280 aaKnown RBP8.37□□□□□ -1.07
CHD6-202ENST00000373222 PDE4AP27815 886 aa8.36□□□□□ -1.07
CHD6-202ENST00000373222 PPLO60437 1756 aa8.36□□□□□ -1.07
CHD6-202ENST00000373222 QRICH2Q9H0J4 1663 aa8.36□□□□□ -1.07
CHD6-202ENST00000373222 EIF3AQ14152 1382 aaKnown RBP8.35□□□□□ -1.07
CHD6-202ENST00000373222 ZNF518AQ6AHZ1 1483 aa8.35□□□□□ -1.07
CHD6-202ENST00000373222 MYO5BQ9ULV0 1848 aa8.35□□□□□ -1.07
CHD6-202ENST00000373222 CD109Q6YHK3 1445 aa8.35□□□□□ -1.07
CHD6-202ENST00000373222 IRX5P78411 483 aaPredicted RBP8.35□□□□□ -1.07
CHD6-202ENST00000373222 GOLGA2Q08379 1002 aa8.35□□□□□ -1.07
CHD6-202ENST00000373222 MYOM2P54296 1465 aa8.35□□□□□ -1.07
CHD6-202ENST00000373222 ADGRB3O60242 1522 aa8.35□□□□□ -1.07
CHD6-202ENST00000373222 CDCA8Q53HL2 280 aa8.35□□□□□ -1.07
CHD6-202ENST00000373222 IPO9Q96P70 1041 aaKnown RBP8.35□□□□□ -1.07
CHD6-202ENST00000373222 CENPJQ9HC77 1338 aaPredicted RBP8.34□□□□□ -1.07
CHD6-202ENST00000373222 PIK3C2GO75747 1445 aa8.34□□□□□ -1.07
CHD6-202ENST00000373222 NSD3Q9BZ95 1437 aa8.34□□□□□ -1.07
CHD6-202ENST00000373222 ANP32AP39687 249 aaKnown RBP8.34□□□□□ -1.07
CHD6-202ENST00000373222 SLFN5Q08AF3 891 aa8.34□□□□□ -1.07
CHD6-202ENST00000373222 POGZQ7Z3K3 1410 aa8.34□□□□□ -1.07
CHD6-202ENST00000373222 ZC3H13Q5T200 1668 aaKnown RBP8.34□□□□□ -1.07
CHD6-202ENST00000373222 SHPRHQ149N8 1683 aa8.33□□□□□ -1.08
CHD6-202ENST00000373222 NRXN1Q9ULB1 1477 aa8.33□□□□□ -1.08
CHD6-202ENST00000373222 POTEB3A0JP26 581 aa8.33□□□□□ -1.08
CHD6-202ENST00000373222 POTEBQ6S5H4 581 aa8.33□□□□□ -1.08
CHD6-202ENST00000373222 BACH2Q9BYV9 841 aa8.33□□□□□ -1.08
CHD6-202ENST00000373222 ADGRB1O14514 1584 aa8.33□□□□□ -1.08
CHD6-202ENST00000373222 FAM205CA6NFA0 338 aa8.32□□□□□ -1.08
CHD6-202ENST00000373222 WDR70Q9NW82 654 aa8.32□□□□□ -1.08
CHD6-202ENST00000373222 STK26Q9P289 416 aa8.32□□□□□ -1.08
CHD6-202ENST00000373222 TNNQ9UQP3 1299 aa8.32□□□□□ -1.08
CHD6-202ENST00000373222 HECW2Q9P2P5 1572 aa8.32□□□□□ -1.08
CHD6-202ENST00000373222 MYO3AQ8NEV4 1616 aa8.32□□□□□ -1.08
CHD6-202ENST00000373222 GZF1Q9H116 711 aaPredicted RBP8.32□□□□□ -1.08
CHD6-202ENST00000373222 CABP2Q9NPB3 220 aa8.32□□□□□ -1.08
CHD6-202ENST00000373222 OCEL1Q9H607 264 aa8.31□□□□□ -1.08
CHD6-202ENST00000373222 LAS1LQ9Y4W2 734 aaKnown RBP8.31□□□□□ -1.08
CHD6-202ENST00000373222 KDM2BQ8NHM5 1336 aa8.31□□□□□ -1.08
CHD6-202ENST00000373222 ABCC3O15438 1527 aa8.31□□□□□ -1.08
CHD6-202ENST00000373222 INSRP06213 1382 aa8.31□□□□□ -1.08
CHD6-202ENST00000373222 CAMSAP1Q5T5Y3 1602 aa8.31□□□□□ -1.08
CHD6-202ENST00000373222 TCERG1O14776 1098 aaKnown RBP8.31□□□□□ -1.08
CHD6-202ENST00000373222 SLC4A3P48751 1232 aa8.31□□□□□ -1.08
CHD6-202ENST00000373222 RGS3P49796 1198 aa8.31□□□□□ -1.08
CHD6-202ENST00000373222 PLCD3Q8N3E9 789 aa8.31□□□□□ -1.08
CHD6-202ENST00000373222 BCL2L13Q9BXK5 485 aa8.31□□□□□ -1.08
CHD6-202ENST00000373222 C14orf93Q9H972 538 aaKnown RBP8.31□□□□□ -1.08
CHD6-202ENST00000373222 ZBTB47Q9UFB7 747 aaPredicted RBP8.31□□□□□ -1.08
CHD6-202ENST00000373222 YEATS2Q9ULM3 1422 aa8.31□□□□□ -1.08
CHD6-202ENST00000373222 MORC1Q86VD1 984 aa8.3□□□□□ -1.08
CHD6-202ENST00000373222 TRMT2AQ8IZ69 625 aaKnown RBP8.3□□□□□ -1.08
CHD6-202ENST00000373222 BCL11AQ9H165 835 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms