RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 NEUROD6Q96NK8 337 aa10.99□□□□□ -0.65
PTPRT-205ENST00000373193 SERPINA10Q9UK55 444 aa10.99□□□□□ -0.65
PTPRT-205ENST00000373193 IKQ13123 557 aaPredicted RBP10.98□□□□□ -0.65
PTPRT-205ENST00000373193 CCDC97Q96F63 343 aaPredicted RBP10.98□□□□□ -0.65
PTPRT-205ENST00000373193 TANGO6Q9C0B7 1094 aa10.98□□□□□ -0.65
PTPRT-205ENST00000373193 APAF1O14727 1248 aa10.98□□□□□ -0.65
PTPRT-205ENST00000373193 SSR1P43307 286 aaKnown RBP10.98□□□□□ -0.65
PTPRT-205ENST00000373193 CCDC192P0DO97 292 aa10.98□□□□□ -0.65
PTPRT-205ENST00000373193 RABEP1Q15276 862 aa10.98□□□□□ -0.65
PTPRT-205ENST00000373193 NUP155O75694 1391 aa10.98□□□□□ -0.65
PTPRT-205ENST00000373193 SHTN1A0MZ66 631 aa10.98□□□□□ -0.65
PTPRT-205ENST00000373193 SPDYE4A6NLX3 237 aa10.97□□□□□ -0.65
PTPRT-205ENST00000373193 NEK4P51957 841 aa10.97□□□□□ -0.65
PTPRT-205ENST00000373193 PDCL3Q9H2J4 239 aa10.97□□□□□ -0.65
PTPRT-205ENST00000373193 NINLQ9Y2I6 1382 aa10.97□□□□□ -0.65
PTPRT-205ENST00000373193 FKBP5Q13451 457 aaPredicted RBP10.97□□□□□ -0.65
PTPRT-205ENST00000373193 UBE4AQ14139 1066 aa10.97□□□□□ -0.65
PTPRT-205ENST00000373193 ESPNB1AK53 854 aa10.96□□□□□ -0.65
PTPRT-205ENST00000373193 KIAA1328Q86T90 577 aa10.96□□□□□ -0.65
PTPRT-205ENST00000373193 ZNF428Q96B54 188 aa10.96□□□□□ -0.65
PTPRT-205ENST00000373193 ME1P48163 572 aa10.96□□□□□ -0.66
PTPRT-205ENST00000373193 FILIP1Q7Z7B0 1213 aa10.96□□□□□ -0.66
PTPRT-205ENST00000373193 FSD1Q9BTV5 496 aa10.96□□□□□ -0.66
PTPRT-205ENST00000373193 ERC2O15083 957 aa10.96□□□□□ -0.66
PTPRT-205ENST00000373193 L3MBTL2Q969R5 705 aa10.96□□□□□ -0.66
PTPRT-205ENST00000373193 IQCEQ6IPM2 695 aa10.95□□□□□ -0.66
PTPRT-205ENST00000373193 ZNF396Q96N95 335 aaPredicted RBP10.95□□□□□ -0.66
PTPRT-205ENST00000373193 TRAK1Q9UPV9 953 aa10.95□□□□□ -0.66
PTPRT-205ENST00000373193 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
PTPRT-205ENST00000373193 TXLNAP40222 546 aa10.95□□□□□ -0.66
PTPRT-205ENST00000373193 XBP1P17861 261 aa10.95□□□□□ -0.66
PTPRT-205ENST00000373193 TTC5Q8N0Z6 440 aa10.95□□□□□ -0.66
PTPRT-205ENST00000373193 CCDC91Q7Z6B0 441 aa10.95□□□□□ -0.66
PTPRT-205ENST00000373193 C1orf115Q9H7X2 142 aa10.95□□□□□ -0.66
PTPRT-205ENST00000373193 DNA2P51530 1060 aa10.95□□□□□ -0.66
PTPRT-205ENST00000373193 CRACR2AQ9BSW2 395 aa10.95□□□□□ -0.66
PTPRT-205ENST00000373193 CLGNO14967 610 aa10.94□□□□□ -0.66
PTPRT-205ENST00000373193 DDX11Q96FC9 970 aa10.94□□□□□ -0.66
PTPRT-205ENST00000373193 TEFQ10587 303 aa10.94□□□□□ -0.66
PTPRT-205ENST00000373193 UBXN4Q92575 508 aa10.94□□□□□ -0.66
PTPRT-205ENST00000373193 KIF7Q2M1P5 1343 aa10.94□□□□□ -0.66
PTPRT-205ENST00000373193 SYTL4Q96C24 671 aaPredicted RBP10.94□□□□□ -0.66
PTPRT-205ENST00000373193 ROCK1Q13464 1354 aa10.94□□□□□ -0.66
PTPRT-205ENST00000373193 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
PTPRT-205ENST00000373193 KIF27Q86VH2 1401 aa10.94□□□□□ -0.66
PTPRT-205ENST00000373193 PSMA5P28066 241 aa10.94□□□□□ -0.66
PTPRT-205ENST00000373193 GTF2A1P52655 376 aaPredicted RBP10.94□□□□□ -0.66
PTPRT-205ENST00000373193 RIPK4P57078 832 aa10.94□□□□□ -0.66
PTPRT-205ENST00000373193 XPCQ01831 940 aaPredicted RBP10.94□□□□□ -0.66
PTPRT-205ENST00000373193 FAM107BQ9H098 131 aa10.94□□□□□ -0.66
PTPRT-205ENST00000373193 AIMP1Q12904 312 aaKnown RBP10.94□□□□□ -0.66
PTPRT-205ENST00000373193 ZMYND15Q9H091 742 aa10.94□□□□□ -0.66
PTPRT-205ENST00000373193 MAP4K4O95819 1239 aaPredicted RBP10.93□□□□□ -0.66
PTPRT-205ENST00000373193 CALCOCO1Q9P1Z2 691 aa10.93□□□□□ -0.66
PTPRT-205ENST00000373193 ATP2C2O75185 946 aa10.93□□□□□ -0.66
PTPRT-205ENST00000373193 RAI14Q9P0K7 980 aa10.93□□□□□ -0.66
PTPRT-205ENST00000373193 KANK4Q5T7N3 995 aaPredicted RBP10.93□□□□□ -0.66
PTPRT-205ENST00000373193 CNTROBQ8N137 903 aa10.93□□□□□ -0.66
PTPRT-205ENST00000373193 SYCE3A1L190 88 aa10.92□□□□□ -0.66
PTPRT-205ENST00000373193 BBXQ8WY36 941 aaPredicted RBP10.92□□□□□ -0.66
PTPRT-205ENST00000373193 CAMK4Q16566 473 aa10.92□□□□□ -0.66
PTPRT-205ENST00000373193 ST20-MTHFSA0A0A6YYL1 179 aa10.92□□□□□ -0.66
PTPRT-205ENST00000373193 LUC7LQ9NQ29 371 aaKnown RBP10.92□□□□□ -0.66
PTPRT-205ENST00000373193 MNAT1P51948 309 aa10.92□□□□□ -0.66
PTPRT-205ENST00000373193 STIM1Q13586 685 aa10.92□□□□□ -0.66
PTPRT-205ENST00000373193 CASQ1P31415 396 aa10.91□□□□□ -0.66
PTPRT-205ENST00000373193 IFFO1Q0D2I5 559 aa10.91□□□□□ -0.66
PTPRT-205ENST00000373193 EPB41L2O43491 1005 aaKnown RBP10.91□□□□□ -0.66
PTPRT-205ENST00000373193 TAF4BQ92750 862 aa10.91□□□□□ -0.66
PTPRT-205ENST00000373193 FHAD1B1AJZ9 1412 aa10.91□□□□□ -0.66
PTPRT-205ENST00000373193 ATP2B2Q01814 1243 aa10.91□□□□□ -0.66
PTPRT-205ENST00000373193 CCDC148Q8NFR7 591 aa10.91□□□□□ -0.66
PTPRT-205ENST00000373193 ZBTB9Q96C00 473 aa10.91□□□□□ -0.66
PTPRT-205ENST00000373193 API5Q9BZZ5 524 aaKnown RBP10.91□□□□□ -0.66
PTPRT-205ENST00000373193 CBFA2T2O43439 604 aa10.9□□□□□ -0.66
PTPRT-205ENST00000373193 SSBP05455 408 aaKnown RBP eCLIP10.9□□□□□ -0.66
PTPRT-205ENST00000373193 PLCD3Q8N3E9 789 aa10.9□□□□□ -0.66
PTPRT-205ENST00000373193 COG3Q96JB2 828 aa10.9□□□□□ -0.66
PTPRT-205ENST00000373193 HSP90AB4PQ58FF6 505 aa10.9□□□□□ -0.66
PTPRT-205ENST00000373193 WRNQ14191 1432 aaPredicted RBP eCLIP10.9□□□□□ -0.66
PTPRT-205ENST00000373193 ARHGAP29Q52LW3 1261 aa10.9□□□□□ -0.66
PTPRT-205ENST00000373193 CCDC178Q5BJE1 867 aa10.9□□□□□ -0.66
PTPRT-205ENST00000373193 SPATA24Q86W54 205 aa10.9□□□□□ -0.66
PTPRT-205ENST00000373193 TMCO5BA8MYB1 307 aa10.9□□□□□ -0.66
PTPRT-205ENST00000373193 KLHL34Q8N239 644 aa10.9□□□□□ -0.66
PTPRT-205ENST00000373193 EVA1CP58658 441 aa10.9□□□□□ -0.67
PTPRT-205ENST00000373193 PDCP20941 246 aa10.89□□□□□ -0.67
PTPRT-205ENST00000373193 LMAN1P49257 510 aa10.89□□□□□ -0.67
PTPRT-205ENST00000373193 PIBF1Q8WXW3 757 aa10.89□□□□□ -0.67
PTPRT-205ENST00000373193 HMOX1P09601 288 aa10.89□□□□□ -0.67
PTPRT-205ENST00000373193 PSMD1Q99460 953 aa10.89□□□□□ -0.67
PTPRT-205ENST00000373193 SART3Q15020 963 aaKnown RBP10.89□□□□□ -0.67
PTPRT-205ENST00000373193 WWC2Q6AWC2 1192 aa10.89□□□□□ -0.67
PTPRT-205ENST00000373193 TSPYL4Q9UJ04 414 aa10.89□□□□□ -0.67
PTPRT-205ENST00000373193 PIP4K2AP48426 406 aaPredicted RBP10.89□□□□□ -0.67
PTPRT-205ENST00000373193 MATR3P43243 847 aaKnown RBP eCLIP10.89□□□□□ -0.67
PTPRT-205ENST00000373193 PRKRIP1Q9H875 184 aaPredicted RBP10.89□□□□□ -0.67
PTPRT-205ENST00000373193 TRMT1Q9NXH9 659 aaKnown RBP10.89□□□□□ -0.67
PTPRT-205ENST00000373193 IRX3P78415 501 aaPredicted RBP10.88□□□□□ -0.67
PTPRT-205ENST00000373193 PTPN14Q15678 1187 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms