RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 TTLL5Q6EMB2 1281 aa13.76□□□□□ -0.21
VCL-202ENST00000372755 NLRP6P59044 892 aa13.76□□□□□ -0.21
VCL-202ENST00000372755 RABEP1Q15276 862 aa13.76□□□□□ -0.21
VCL-202ENST00000372755 JMYQ8N9B5 988 aa13.76□□□□□ -0.21
VCL-202ENST00000372755 CNTLNQ9NXG0 1405 aa13.75□□□□□ -0.21
VCL-202ENST00000372755 BRD4O60885 1362 aaPredicted RBP13.75□□□□□ -0.21
VCL-202ENST00000372755 ERLIN2O94905 339 aa13.75□□□□□ -0.21
VCL-202ENST00000372755 STK38Q15208 465 aa13.75□□□□□ -0.21
VCL-202ENST00000372755 NFKBIBQ15653 356 aa13.75□□□□□ -0.21
VCL-202ENST00000372755 CCDC158Q5M9N0 1113 aa13.75□□□□□ -0.21
VCL-202ENST00000372755 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.75□□□□□ -0.214e-7■■□□□ 14.3
VCL-202ENST00000372755 ZNHIT6Q9NWK9 470 aaKnown RBP13.75□□□□□ -0.21
VCL-202ENST00000372755 TTC39AQ5SRH9 613 aa13.75□□□□□ -0.21
VCL-202ENST00000372755 CYB5RLQ6IPT4 315 aa13.75□□□□□ -0.21
VCL-202ENST00000372755 ZRSR2Q15696 482 aaKnown RBP13.75□□□□□ -0.21
VCL-202ENST00000372755 CABP2Q9NPB3 220 aa13.75□□□□□ -0.21
VCL-202ENST00000372755 SMG6Q86US8 1419 aaKnown RBP13.75□□□□□ -0.21
VCL-202ENST00000372755 GCC1Q96CN9 775 aa13.75□□□□□ -0.21
VCL-202ENST00000372755 TXLNBQ8N3L3 684 aa13.74□□□□□ -0.21
VCL-202ENST00000372755 RNF214Q8ND24 703 aa13.74□□□□□ -0.21
VCL-202ENST00000372755 DACH1Q9UI36 760 aa13.74□□□□□ -0.21
VCL-202ENST00000372755 PAF1Q8N7H5 531 aa13.74□□□□□ -0.21
VCL-202ENST00000372755 LUC7LQ9NQ29 371 aaKnown RBP13.74□□□□□ -0.21
VCL-202ENST00000372755 KDM4AO75164 1064 aa13.74□□□□□ -0.21
VCL-202ENST00000372755 ATP2B1P20020 1258 aa13.74□□□□□ -0.21
VCL-202ENST00000372755 NEK4P51957 841 aa13.74□□□□□ -0.21
VCL-202ENST00000372755 CUX1P39880 1505 aa13.73□□□□□ -0.21
VCL-202ENST00000372755 CAVIN1Q6NZI2 390 aaKnown RBP13.73□□□□□ -0.21
VCL-202ENST00000372755 TRAK2O60296 914 aa13.73□□□□□ -0.21
VCL-202ENST00000372755 GNAI2P04899 355 aa13.73□□□□□ -0.21
VCL-202ENST00000372755 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
VCL-202ENST00000372755 ANKRD1Q15327 319 aa13.73□□□□□ -0.21
VCL-202ENST00000372755 AEBP1Q8IUX7 1158 aa13.73□□□□□ -0.21
VCL-202ENST00000372755 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
VCL-202ENST00000372755 NUTM2GQ5VZR2 741 aa13.72□□□□□ -0.21
VCL-202ENST00000372755 CNNM1Q9NRU3 951 aa13.72□□□□□ -0.21
VCL-202ENST00000372755 CCDC66A2RUB6 948 aa13.72□□□□□ -0.21
VCL-202ENST00000372755 STIM1Q13586 685 aa13.72□□□□□ -0.21
VCL-202ENST00000372755 ANKRD18AQ8IVF6 992 aa13.72□□□□□ -0.21
VCL-202ENST00000372755 NACAP1Q9BZK3 213 aa13.72□□□□□ -0.21
VCL-202ENST00000372755 HMGN5P82970 282 aaKnown RBP13.71□□□□□ -0.21
VCL-202ENST00000372755 BRPF1P55201 1214 aaPredicted RBP13.71□□□□□ -0.21
VCL-202ENST00000372755 TRIM22Q8IYM9 498 aa13.71□□□□□ -0.21
VCL-202ENST00000372755 MTHFSP49914 203 aa13.71□□□□□ -0.21
VCL-202ENST00000372755 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
VCL-202ENST00000372755 FYCO1Q9BQS8 1478 aa13.71□□□□□ -0.22
VCL-202ENST00000372755 RRBP1Q9P2E9 1410 aaKnown RBP13.71□□□□□ -0.22
VCL-202ENST00000372755 FMNL2Q96PY5 1086 aa13.71□□□□□ -0.22
VCL-202ENST00000372755 PRPF40AO75400 957 aaKnown RBP13.71□□□□□ -0.22
VCL-202ENST00000372755 TCP11L2Q8N4U5 519 aa13.71□□□□□ -0.22
VCL-202ENST00000372755 CYP46A1Q9Y6A2 500 aa13.71□□□□□ -0.22
VCL-202ENST00000372755 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
VCL-202ENST00000372755 TWISTNBQ3B726 338 aaPredicted RBP13.7□□□□□ -0.22
VCL-202ENST00000372755 LEKR1Q6ZMV7 388 aa13.7□□□□□ -0.22
VCL-202ENST00000372755 AXDND1Q5T1B0 1012 aaPredicted RBP13.7□□□□□ -0.22
VCL-202ENST00000372755 PNISRQ8TF01 805 aaKnown RBP13.7□□□□□ -0.22
VCL-202ENST00000372755 PPFIBP1Q86W92 1011 aa13.7□□□□□ -0.22
VCL-202ENST00000372755 ABTB2Q8N961 1025 aa13.7□□□□□ -0.22
VCL-202ENST00000372755 PDCL3Q9H2J4 239 aa13.7□□□□□ -0.22
VCL-202ENST00000372755 GOLGA6L10A6NI86 522 aa13.7□□□□□ -0.22
VCL-202ENST00000372755 FAM177BA6PVY3 158 aa13.7□□□□□ -0.22
VCL-202ENST00000372755 SERPINC1P01008 464 aa13.7□□□□□ -0.22
VCL-202ENST00000372755 ADAMTS8Q9UP79 889 aa13.7□□□□□ -0.22
VCL-202ENST00000372755 NEFHP12036 1026 aa13.69□□□□□ -0.22
VCL-202ENST00000372755 TATP17735 454 aaPredicted RBP13.69□□□□□ -0.22
VCL-202ENST00000372755 FAM69CQ0P6D2 419 aa13.69□□□□□ -0.22
VCL-202ENST00000372755 SKIDA1Q1XH10 827 aa13.69□□□□□ -0.22
VCL-202ENST00000372755 ZSCAN25Q6NSZ9 544 aa13.69□□□□□ -0.22
VCL-202ENST00000372755 FANCD2Q9BXW9 1451 aa13.69□□□□□ -0.22
VCL-202ENST00000372755 CCT4P50991 539 aaKnown RBP13.69□□□□□ -0.22
VCL-202ENST00000372755 TSPYL1Q9H0U9 437 aa13.69□□□□□ -0.22
VCL-202ENST00000372755 CCDC192P0DO97 292 aa13.69□□□□□ -0.22
VCL-202ENST00000372755 BCL11BQ9C0K0 894 aaPredicted RBP13.69□□□□□ -0.22
VCL-202ENST00000372755 FIBPO43427 364 aa13.69□□□□□ -0.22
VCL-202ENST00000372755 PDZRN3Q9UPQ7 1066 aa13.69□□□□□ -0.22
VCL-202ENST00000372755 PRKAR2BP31323 418 aa13.68□□□□□ -0.22
VCL-202ENST00000372755 CCDC69A6NI79 296 aa13.68□□□□□ -0.22
VCL-202ENST00000372755 SOGA3Q5TF21 947 aa13.68□□□□□ -0.22
VCL-202ENST00000372755 AEBP2Q6ZN18 517 aaPredicted RBP13.68□□□□□ -0.22
VCL-202ENST00000372755 CBFA2T2O43439 604 aa13.68□□□□□ -0.22
VCL-202ENST00000372755 CT47B1P0C2W7 299 aaPredicted RBP13.68□□□□□ -0.22
VCL-202ENST00000372755 EXOSC9Q06265 439 aaKnown RBP13.68□□□□□ -0.22
VCL-202ENST00000372755 DEF6Q9H4E7 631 aa13.68□□□□□ -0.22
VCL-202ENST00000372755 NOL7Q9UMY1 257 aaKnown RBP13.68□□□□□ -0.22
VCL-202ENST00000372755 FGD6Q6ZV73 1430 aa13.68□□□□□ -0.22
VCL-202ENST00000372755 PDE3AQ14432 1141 aa13.67□□□□□ -0.22
VCL-202ENST00000372755 CCDC181Q5TID7 509 aa13.67□□□□□ -0.22
VCL-202ENST00000372755 WIZO95785 1651 aa13.67□□□□□ -0.22
VCL-202ENST00000372755 SEPT7Q16181 437 aaKnown RBP13.67□□□□□ -0.22
VCL-202ENST00000372755 WDR33Q9C0J8 1336 aaKnown RBP13.67□□□□□ -0.22
VCL-202ENST00000372755 ANKRD50Q9ULJ7 1429 aa13.66□□□□□ -0.22
VCL-202ENST00000372755 ESCO1Q5FWF5 840 aa13.66□□□□□ -0.22
VCL-202ENST00000372755 LRRCC1Q9C099 1032 aa13.66□□□□□ -0.22
VCL-202ENST00000372755 CEBPZQ03701 1054 aaKnown RBP13.66□□□□□ -0.22
VCL-202ENST00000372755 CCDC57Q2TAC2 916 aa13.66□□□□□ -0.22
VCL-202ENST00000372755 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
VCL-202ENST00000372755 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
VCL-202ENST00000372755 TNMDQ9H2S6 317 aa13.66□□□□□ -0.22
VCL-202ENST00000372755 PPP2R1AP30153 589 aa13.66□□□□□ -0.22
VCL-202ENST00000372755 CDKL5O76039 1030 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms