RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 FOXO3O43524 673 aa20.38■□□□□ 0.85
YIPF3-202ENST00000372422 NPHP3Q7Z494 1330 aa20.37■□□□□ 0.85
YIPF3-202ENST00000372422 FYB1O15117 783 aa20.37■□□□□ 0.85
YIPF3-202ENST00000372422 BRINP3Q76B58 766 aa20.37■□□□□ 0.85
YIPF3-202ENST00000372422 SSH2Q76I76 1423 aa20.37■□□□□ 0.85
YIPF3-202ENST00000372422 NRKQ7Z2Y5 1582 aa20.37■□□□□ 0.85
YIPF3-202ENST00000372422 MORC1Q86VD1 984 aa20.37■□□□□ 0.85
YIPF3-202ENST00000372422 TOM1O60784 492 aa20.36■□□□□ 0.85
YIPF3-202ENST00000372422 KIF20BQ96Q89 1820 aa20.35■□□□□ 0.85
YIPF3-202ENST00000372422 PAK3O75914 559 aaPredicted RBP20.34■□□□□ 0.85
YIPF3-202ENST00000372422 GGNBP2Q9H3C7 697 aa20.34■□□□□ 0.85
YIPF3-202ENST00000372422 MYBBP1AQ9BQG0 1328 aaKnown RBP20.34■□□□□ 0.85
YIPF3-202ENST00000372422 KRT28Q7Z3Y7 464 aa20.34■□□□□ 0.85
YIPF3-202ENST00000372422 CCER2I3L3R5 266 aa20.33■□□□□ 0.84
YIPF3-202ENST00000372422 NME9Q86XW9 330 aa20.33■□□□□ 0.84
YIPF3-202ENST00000372422 COG3Q96JB2 828 aa20.33■□□□□ 0.84
YIPF3-202ENST00000372422 CERKQ8TCT0 537 aa20.32■□□□□ 0.84
YIPF3-202ENST00000372422 ANKRD26Q9UPS8 1709 aa20.31■□□□□ 0.84
YIPF3-202ENST00000372422 ABTB2Q8N961 1025 aa20.3■□□□□ 0.84
YIPF3-202ENST00000372422 XPCQ01831 940 aaPredicted RBP20.29■□□□□ 0.84
YIPF3-202ENST00000372422 NLRP13Q86W25 1043 aa20.29■□□□□ 0.84
YIPF3-202ENST00000372422 SBNO1A3KN83 1393 aa20.28■□□□□ 0.84
YIPF3-202ENST00000372422 USP31Q70CQ4 1352 aa20.28■□□□□ 0.84
YIPF3-202ENST00000372422 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
YIPF3-202ENST00000372422 UBAP1LF5GYI3 381 aa20.27■□□□□ 0.84
YIPF3-202ENST00000372422 PPP2R1AP30153 589 aa20.27■□□□□ 0.84
YIPF3-202ENST00000372422 NLRP6P59044 892 aa20.27■□□□□ 0.84
YIPF3-202ENST00000372422 OVOS2A0A0J9YW53 1432 aa20.27■□□□□ 0.83
YIPF3-202ENST00000372422 OVOS2Q6IE36 1432 aa20.27■□□□□ 0.83
YIPF3-202ENST00000372422 TNNT2P45379 298 aaPredicted RBP20.26■□□□□ 0.83
YIPF3-202ENST00000372422 PXDNQ92626 1479 aa20.26■□□□□ 0.83
YIPF3-202ENST00000372422 PIK3C2AO00443 1686 aa20.25■□□□□ 0.83
YIPF3-202ENST00000372422 ROBO1Q9Y6N7 1651 aa20.25■□□□□ 0.83
YIPF3-202ENST00000372422 DDX17Q92841 729 aaKnown RBP20.25■□□□□ 0.83
YIPF3-202ENST00000372422 TRPM3Q9HCF6 1732 aaPredicted RBP20.25■□□□□ 0.83
YIPF3-202ENST00000372422 LMOD2Q6P5Q4 547 aa20.25■□□□□ 0.83
YIPF3-202ENST00000372422 ZRANB1Q9UGI0 708 aa20.25■□□□□ 0.83
YIPF3-202ENST00000372422 SOS2Q07890 1332 aaPredicted RBP20.25■□□□□ 0.83
YIPF3-202ENST00000372422 TNS3Q68CZ2 1445 aa20.24■□□□□ 0.83
YIPF3-202ENST00000372422 NHSL1Q5SYE7 1610 aa20.24■□□□□ 0.83
YIPF3-202ENST00000372422 ARHGEF10O15013 1369 aa20.23■□□□□ 0.83
YIPF3-202ENST00000372422 MRS2Q9HD23 443 aa20.23■□□□□ 0.83
YIPF3-202ENST00000372422 AATKQ6ZMQ8 1374 aa20.22■□□□□ 0.83
YIPF3-202ENST00000372422 PIP4K2BP78356 416 aa20.22■□□□□ 0.83
YIPF3-202ENST00000372422 USP54Q70EL1 1684 aa20.22■□□□□ 0.83
YIPF3-202ENST00000372422 SPATA31A3Q5VYP0 1347 aa20.21■□□□□ 0.83
YIPF3-202ENST00000372422 NUTM2GQ5VZR2 741 aa20.21■□□□□ 0.83
YIPF3-202ENST00000372422 AHDC1Q5TGY3 1603 aaPredicted RBP20.2■□□□□ 0.82
YIPF3-202ENST00000372422 KCNH5Q8NCM2 988 aa20.2■□□□□ 0.82
YIPF3-202ENST00000372422 ALS2Q96Q42 1657 aa20.19■□□□□ 0.82
YIPF3-202ENST00000372422 CFAP53Q96M91 514 aa20.18■□□□□ 0.82
YIPF3-202ENST00000372422 MTHFSP49914 203 aa20.17■□□□□ 0.82
YIPF3-202ENST00000372422 LRRC59Q96AG4 307 aaKnown RBP20.17■□□□□ 0.82
YIPF3-202ENST00000372422 USP19O94966 1318 aa20.16■□□□□ 0.82
YIPF3-202ENST00000372422 SOX12O15370 315 aa20.15■□□□□ 0.82
YIPF3-202ENST00000372422 CCDC184Q52MB2 194 aa20.15■□□□□ 0.82
YIPF3-202ENST00000372422 POLKQ9UBT6 870 aa20.14■□□□□ 0.81
YIPF3-202ENST00000372422 SLIT3O75094 1523 aa20.14■□□□□ 0.81
YIPF3-202ENST00000372422 MARF1Q9Y4F3 1742 aaKnown RBP20.13■□□□□ 0.81
YIPF3-202ENST00000372422 PPM1GO15355 546 aaPredicted RBP20.13■□□□□ 0.81
YIPF3-202ENST00000372422 SMG6Q86US8 1419 aaKnown RBP20.13■□□□□ 0.81
YIPF3-202ENST00000372422 GCP02774 474 aa20.12■□□□□ 0.81
YIPF3-202ENST00000372422 RRS1Q15050 365 aaKnown RBP20.12■□□□□ 0.81
YIPF3-202ENST00000372422 PHLPP1O60346 1717 aa20.12■□□□□ 0.81
YIPF3-202ENST00000372422 MED1Q15648 1581 aaPredicted RBP20.12■□□□□ 0.81
YIPF3-202ENST00000372422 KIF24Q5T7B8 1368 aa20.11■□□□□ 0.81
YIPF3-202ENST00000372422 FBLN1P23142 703 aa20.11■□□□□ 0.81
YIPF3-202ENST00000372422 EMILIN1Q9Y6C2 1016 aa20.11■□□□□ 0.81
YIPF3-202ENST00000372422 MAP2P11137 1827 aaKnown RBP20.11■□□□□ 0.81
YIPF3-202ENST00000372422 CDK12Q9NYV4 1490 aaPredicted RBP20.1■□□□□ 0.81
YIPF3-202ENST00000372422 PLEKHG5O94827 1062 aa20.1■□□□□ 0.81
YIPF3-202ENST00000372422 MAP3K19Q56UN5 1328 aa20.1■□□□□ 0.81
YIPF3-202ENST00000372422 AMPHP49418 695 aa20.09■□□□□ 0.81
YIPF3-202ENST00000372422 HAP1P54257 671 aaPredicted RBP20.09■□□□□ 0.81
YIPF3-202ENST00000372422 NFAT5O94916 1531 aa20.09■□□□□ 0.81
YIPF3-202ENST00000372422 WDR43Q15061 677 aaKnown RBP eCLIP20.08■□□□□ 0.81
YIPF3-202ENST00000372422 PNISRQ8TF01 805 aaKnown RBP20.08■□□□□ 0.81
YIPF3-202ENST00000372422 INSRP06213 1382 aa20.08■□□□□ 0.81
YIPF3-202ENST00000372422 PNPLA6Q8IY17 1366 aa20.08■□□□□ 0.81
YIPF3-202ENST00000372422 COL16A1Q07092 1604 aaPredicted RBP20.08■□□□□ 0.8
YIPF3-202ENST00000372422 NUDCQ9Y266 331 aa20.08■□□□□ 0.8
YIPF3-202ENST00000372422 RTL1A6NKG5 1358 aa20.07■□□□□ 0.8
YIPF3-202ENST00000372422 FLT4P35916 1363 aa20.07■□□□□ 0.8
YIPF3-202ENST00000372422 FAM9BQ8IZU0 186 aa20.07■□□□□ 0.8
YIPF3-202ENST00000372422 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
YIPF3-202ENST00000372422 PHRF1Q9P1Y6 1649 aaKnown RBP20.06■□□□□ 0.8
YIPF3-202ENST00000372422 CABLES1Q8TDN4 633 aa20.05■□□□□ 0.8
YIPF3-202ENST00000372422 ARHGEF25Q86VW2 580 aa20.04■□□□□ 0.8
YIPF3-202ENST00000372422 YTHDC1Q96MU7 727 aaKnown RBP20.04■□□□□ 0.8
YIPF3-202ENST00000372422 ZBTB7CA1YPR0 619 aa20.04■□□□□ 0.8
YIPF3-202ENST00000372422 COL3A1P02461 1466 aaPredicted RBP20.03■□□□□ 0.8
YIPF3-202ENST00000372422 HOXC9P31274 260 aa20.03■□□□□ 0.8
YIPF3-202ENST00000372422 ZC3H6P61129 1189 aaKnown RBP20.03■□□□□ 0.8
YIPF3-202ENST00000372422 COL22A1Q8NFW1 1626 aaPredicted RBP20.03■□□□□ 0.8
YIPF3-202ENST00000372422 CRYBG1Q9Y4K1 1723 aa20.03■□□□□ 0.8
YIPF3-202ENST00000372422 LTN1O94822 1766 aa20.02■□□□□ 0.8
YIPF3-202ENST00000372422 CPDO75976 1380 aa20.02■□□□□ 0.8
YIPF3-202ENST00000372422 IP6K1Q92551 441 aa20.02■□□□□ 0.8
YIPF3-202ENST00000372422 HSP90AB2PQ58FF8 381 aa20.01■□□□□ 0.79
YIPF3-202ENST00000372422 PEAK1Q9H792 1746 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms