RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
YIPF3-201ENST00000372417 NUP155O75694 1391 aa12.29□□□□□ -0.44
YIPF3-201ENST00000372417 NRXN1Q9ULB1 1477 aa12.27□□□□□ -0.44
YIPF3-201ENST00000372417 VGFO15240 615 aaPredicted RBP12.27□□□□□ -0.45
YIPF3-201ENST00000372417 PARP4Q9UKK3 1724 aaKnown RBP12.25□□□□□ -0.45
YIPF3-201ENST00000372417 SYT17Q9BSW7 474 aa12.25□□□□□ -0.45
YIPF3-201ENST00000372417 FHDC1Q9C0D6 1143 aaPredicted RBP12.25□□□□□ -0.45
YIPF3-201ENST00000372417 PHF8Q9UPP1 1060 aa12.25□□□□□ -0.45
YIPF3-201ENST00000372417 TECPR2O15040 1411 aa12.25□□□□□ -0.45
YIPF3-201ENST00000372417 ZBTB7AO95365 584 aa12.24□□□□□ -0.45
YIPF3-201ENST00000372417 GOLGB1Q14789 3259 aaKnown RBP12.24□□□□□ -0.45
YIPF3-201ENST00000372417 SPATA31A1Q5TZJ5 1347 aa12.24□□□□□ -0.45
YIPF3-201ENST00000372417 PHRF1Q9P1Y6 1649 aaKnown RBP12.23□□□□□ -0.45
YIPF3-201ENST00000372417 PTGER2P43116 358 aa12.23□□□□□ -0.45
YIPF3-201ENST00000372417 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
YIPF3-201ENST00000372417 FAM50AQ14320 339 aaKnown RBP12.23□□□□□ -0.45
YIPF3-201ENST00000372417 WAPLQ7Z5K2 1190 aa12.23□□□□□ -0.45
YIPF3-201ENST00000372417 PEAK1Q9H792 1746 aa12.23□□□□□ -0.45
YIPF3-201ENST00000372417 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
YIPF3-201ENST00000372417 AKAP12Q02952 1782 aa12.22□□□□□ -0.45
YIPF3-201ENST00000372417 PLEKHH1Q9ULM0 1364 aa12.21□□□□□ -0.45
YIPF3-201ENST00000372417 ATF5Q9Y2D1 282 aaPredicted RBP12.21□□□□□ -0.45
YIPF3-201ENST00000372417 PDGFDQ9GZP0 370 aaPredicted RBP12.2□□□□□ -0.46
YIPF3-201ENST00000372417 STK26Q9P289 416 aa12.2□□□□□ -0.46
YIPF3-201ENST00000372417 ROCK1Q13464 1354 aa12.19□□□□□ -0.46
YIPF3-201ENST00000372417 APLP2Q06481 763 aa12.19□□□□□ -0.46
YIPF3-201ENST00000372417 PRDM11Q9NQV5 511 aa12.19□□□□□ -0.46
YIPF3-201ENST00000372417 RPGRIP1LQ68CZ1 1315 aa12.18□□□□□ -0.46
YIPF3-201ENST00000372417 GPR162Q16538 588 aa12.18□□□□□ -0.46
YIPF3-201ENST00000372417 STRN4Q9NRL3 753 aa12.18□□□□□ -0.46
YIPF3-201ENST00000372417 WNK3Q9BYP7 1800 aa12.18□□□□□ -0.46
YIPF3-201ENST00000372417 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
YIPF3-201ENST00000372417 BCL11BQ9C0K0 894 aaPredicted RBP12.17□□□□□ -0.46
YIPF3-201ENST00000372417 USP35Q9P2H5 1018 aa12.17□□□□□ -0.46
YIPF3-201ENST00000372417 TOPAZ1Q8N9V7 1692 aa12.16□□□□□ -0.46
YIPF3-201ENST00000372417 C11orf95C9JLR9 678 aaPredicted RBP12.16□□□□□ -0.46
YIPF3-201ENST00000372417 PLSCR1O15162 318 aa12.16□□□□□ -0.46
YIPF3-201ENST00000372417 HSPA6P17066 643 aa12.16□□□□□ -0.46
YIPF3-201ENST00000372417 BARGINQ6ZT62 677 aa12.16□□□□□ -0.46
YIPF3-201ENST00000372417 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
YIPF3-201ENST00000372417 LRRC37A3O60309 1634 aa12.15□□□□□ -0.46
YIPF3-201ENST00000372417 OVOS2A0A0G2JMS6 1433 aa12.15□□□□□ -0.46
YIPF3-201ENST00000372417 OVOS2A0A0J9YW53 1432 aa12.15□□□□□ -0.46
YIPF3-201ENST00000372417 OVOS2Q6IE36 1432 aa12.15□□□□□ -0.46
YIPF3-201ENST00000372417 MTFR1LQ9H019 292 aa12.15□□□□□ -0.46
YIPF3-201ENST00000372417 SSH2Q76I76 1423 aa12.14□□□□□ -0.47
YIPF3-201ENST00000372417 PMFBP1Q8TBY8 1022 aa12.14□□□□□ -0.47
YIPF3-201ENST00000372417 ARXQ96QS3 562 aa12.14□□□□□ -0.47
YIPF3-201ENST00000372417 SGIP1Q9BQI5 828 aa12.14□□□□□ -0.47
YIPF3-201ENST00000372417 KIAA0232Q92628 1395 aa12.14□□□□□ -0.47
YIPF3-201ENST00000372417 ITSN1Q15811 1721 aa12.14□□□□□ -0.47
YIPF3-201ENST00000372417 COL24A1Q17RW2 1714 aa12.14□□□□□ -0.47
YIPF3-201ENST00000372417 ANKARQ7Z5J8 1434 aa12.13□□□□□ -0.47
YIPF3-201ENST00000372417 STK32BQ9NY57 414 aa12.13□□□□□ -0.47
YIPF3-201ENST00000372417 GPRASP1Q5JY77 1395 aa12.13□□□□□ -0.47
YIPF3-201ENST00000372417 LMO7Q8WWI1 1683 aa12.13□□□□□ -0.47
YIPF3-201ENST00000372417 YTHDC2Q9H6S0 1430 aaKnown RBP12.12□□□□□ -0.47
YIPF3-201ENST00000372417 QSER1Q2KHR3 1735 aa12.12□□□□□ -0.47
YIPF3-201ENST00000372417 CHRNA2Q15822 529 aa12.12□□□□□ -0.47
YIPF3-201ENST00000372417 ATP7BP35670 1465 aa12.11□□□□□ -0.47
YIPF3-201ENST00000372417 CAPN15O75808 1086 aa12.11□□□□□ -0.47
YIPF3-201ENST00000372417 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
YIPF3-201ENST00000372417 ATP10DQ9P241 1426 aa12.11□□□□□ -0.47
YIPF3-201ENST00000372417 EVA1CP58658 441 aa12.1□□□□□ -0.47
YIPF3-201ENST00000372417 SLC15A2Q16348 729 aa12.1□□□□□ -0.47
YIPF3-201ENST00000372417 TCP11L2Q8N4U5 519 aa12.1□□□□□ -0.47
YIPF3-201ENST00000372417 KAT6BQ8WYB5 2073 aa12.1□□□□□ -0.47
YIPF3-201ENST00000372417 TMEM132EQ6IEE7 984 aa12.09□□□□□ -0.47
YIPF3-201ENST00000372417 ADGRF5Q8IZF2 1346 aa12.09□□□□□ -0.47
YIPF3-201ENST00000372417 ACIN1Q9UKV3 1341 aaKnown RBP12.09□□□□□ -0.47
YIPF3-201ENST00000372417 PAPPAQ13219 1627 aa12.08□□□□□ -0.48
YIPF3-201ENST00000372417 PROM2Q8N271 834 aa12.08□□□□□ -0.48
YIPF3-201ENST00000372417 THRAP3Q9Y2W1 955 aaKnown RBP12.08□□□□□ -0.48
YIPF3-201ENST00000372417 DHX57Q6P158 1386 aaKnown RBP12.07□□□□□ -0.48
YIPF3-201ENST00000372417 TUBGCP6Q96RT7 1819 aa12.07□□□□□ -0.48
YIPF3-201ENST00000372417 PAK3O75914 559 aaPredicted RBP12.07□□□□□ -0.48
YIPF3-201ENST00000372417 LARP1Q6PKG0 1096 aaKnown RBP12.07□□□□□ -0.48
YIPF3-201ENST00000372417 SIRT1Q96EB6 747 aa12.07□□□□□ -0.48
YIPF3-201ENST00000372417 WDR90Q96KV7 1748 aa12.07□□□□□ -0.48
YIPF3-201ENST00000372417 GPBP1L1Q9HC44 474 aaPredicted RBP12.07□□□□□ -0.48
YIPF3-201ENST00000372417 ZC3H6P61129 1189 aaKnown RBP12.06□□□□□ -0.48
YIPF3-201ENST00000372417 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
YIPF3-201ENST00000372417 PIK3C2GO75747 1445 aa12.05□□□□□ -0.48
YIPF3-201ENST00000372417 NHSQ6T4R5 1651 aa12.05□□□□□ -0.48
YIPF3-201ENST00000372417 TULP4Q9NRJ4 1543 aa12.05□□□□□ -0.48
YIPF3-201ENST00000372417 SLC34A2O95436 690 aa12.04□□□□□ -0.48
YIPF3-201ENST00000372417 PRELPP51888 382 aa12.04□□□□□ -0.48
YIPF3-201ENST00000372417 TXNRD1Q16881 649 aa12.04□□□□□ -0.48
YIPF3-201ENST00000372417 PTF1AQ7RTS3 328 aa12.04□□□□□ -0.48
YIPF3-201ENST00000372417 BTAF1O14981 1849 aa12.03□□□□□ -0.48
YIPF3-201ENST00000372417 GRIN3BO60391 1043 aa12.03□□□□□ -0.48
YIPF3-201ENST00000372417 SAFB2Q14151 953 aaKnown RBP eCLIP12.03□□□□□ -0.48
YIPF3-201ENST00000372417 EIF3AQ14152 1382 aaKnown RBP12.03□□□□□ -0.48
YIPF3-201ENST00000372417 AATKQ6ZMQ8 1374 aa12.03□□□□□ -0.48
YIPF3-201ENST00000372417 ANKRD30BQ9BXX2 1392 aa12.03□□□□□ -0.48
YIPF3-201ENST00000372417 COL13A1Q5TAT6 717 aaPredicted RBP12.02□□□□□ -0.49
YIPF3-201ENST00000372417 ARHGEF28Q8N1W1 1705 aaKnown RBP12.02□□□□□ -0.49
YIPF3-201ENST00000372417 CRB1P82279 1406 aa12.02□□□□□ -0.49
YIPF3-201ENST00000372417 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.49
YIPF3-201ENST00000372417 RGPD5Q99666 1765 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 226.4 ms