RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 UPF2Q9HAU5 1272 aaKnown RBP21.31■■□□□ 1
PCIF1-201ENST00000372409 TRIM35Q9UPQ4 493 aa21.31■■□□□ 1
PCIF1-201ENST00000372409 ZFYVE9O95405 1425 aa21.3■■□□□ 1
PCIF1-201ENST00000372409 RIPK4P57078 832 aa21.3■■□□□ 1
PCIF1-201ENST00000372409 HDGFL2Q7Z4V5 671 aaPredicted RBP21.3■■□□□ 1
PCIF1-201ENST00000372409 BECN1Q14457 450 aa21.29■■□□□ 1
PCIF1-201ENST00000372409 PTPRMP28827 1452 aa21.29■■□□□ 1
PCIF1-201ENST00000372409 ITPRIPQ8IWB1 547 aa21.29■■□□□ 1
PCIF1-201ENST00000372409 YTHDC2Q9H6S0 1430 aaKnown RBP21.29■■□□□ 1
PCIF1-201ENST00000372409 DIAPH1O60610 1272 aaKnown RBP21.28■■□□□ 1
PCIF1-201ENST00000372409 SSH1Q8WYL5 1049 aa21.28■■□□□ 1
PCIF1-201ENST00000372409 CT47B1P0C2W7 299 aaPredicted RBP21.28■■□□□ 1
PCIF1-201ENST00000372409 TRIM27P14373 513 aa21.28■■□□□ 1
PCIF1-201ENST00000372409 CDK19Q9BWU1 502 aa21.28■■□□□ 1
PCIF1-201ENST00000372409 RICTORQ6R327 1708 aa21.28■■□□□ 1
PCIF1-201ENST00000372409 CABP1Q9NZU7 370 aa21.28■■□□□ 1
PCIF1-201ENST00000372409 SLKQ9H2G2 1235 aaPredicted RBP21.27■□□□□ 0.99
PCIF1-201ENST00000372409 TMEM131LA2VDJ0 1609 aa21.26■□□□□ 0.99
PCIF1-201ENST00000372409 PREX1Q8TCU6 1659 aa21.26■□□□□ 0.99
PCIF1-201ENST00000372409 COL3A1P02461 1466 aaPredicted RBP21.26■□□□□ 0.99
PCIF1-201ENST00000372409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.26■□□□□ 0.99
PCIF1-201ENST00000372409 RTN4Q9NQC3 1192 aaKnown RBP21.25■□□□□ 0.99
PCIF1-201ENST00000372409 NOB1Q9ULX3 412 aaKnown RBP21.25■□□□□ 0.99
PCIF1-201ENST00000372409 CD163L1Q9NR16 1453 aa21.25■□□□□ 0.99
PCIF1-201ENST00000372409 ATF7IPQ6VMQ6 1270 aa21.24■□□□□ 0.99
PCIF1-201ENST00000372409 NLRP1Q9C000 1473 aa21.23■□□□□ 0.99
PCIF1-201ENST00000372409 FBLN1P23142 703 aa21.23■□□□□ 0.99
PCIF1-201ENST00000372409 DDX19BQ9UMR2 479 aa21.23■□□□□ 0.99
PCIF1-201ENST00000372409 PNNQ9H307 717 aaKnown RBP21.22■□□□□ 0.99
PCIF1-201ENST00000372409 TBC1D32Q96NH3 1257 aa21.21■□□□□ 0.99
PCIF1-201ENST00000372409 TMEM57Q8N5G2 664 aa21.2■□□□□ 0.99
PCIF1-201ENST00000372409 ANKRD26Q9UPS8 1709 aa21.2■□□□□ 0.98
PCIF1-201ENST00000372409 IL16Q14005 1332 aa21.2■□□□□ 0.98
PCIF1-201ENST00000372409 WAPLQ7Z5K2 1190 aa21.2■□□□□ 0.98
PCIF1-201ENST00000372409 ALKQ9UM73 1620 aa21.19■□□□□ 0.98
PCIF1-201ENST00000372409 ZMYM3Q14202 1370 aa21.19■□□□□ 0.98
PCIF1-201ENST00000372409 MED14O60244 1454 aa21.19■□□□□ 0.98
PCIF1-201ENST00000372409 PRKAR2BP31323 418 aa21.19■□□□□ 0.98
PCIF1-201ENST00000372409 BRPF3Q9ULD4 1205 aa21.18■□□□□ 0.98
PCIF1-201ENST00000372409 CLTCQ00610 1675 aaKnown RBP21.18■□□□□ 0.98
PCIF1-201ENST00000372409 CYB5RLQ6IPT4 315 aa21.17■□□□□ 0.98
PCIF1-201ENST00000372409 KIF16BQ96L93 1317 aa21.17■□□□□ 0.98
PCIF1-201ENST00000372409 IPO8O15397 1037 aaKnown RBP21.16■□□□□ 0.98
PCIF1-201ENST00000372409 FCHSD2O94868 740 aa21.16■□□□□ 0.98
PCIF1-201ENST00000372409 HMOX1P09601 288 aa21.16■□□□□ 0.98
PCIF1-201ENST00000372409 MFAP1P55081 439 aaKnown RBP21.16■□□□□ 0.98
PCIF1-201ENST00000372409 HDAC1Q13547 482 aaPredicted RBP21.16■□□□□ 0.98
PCIF1-201ENST00000372409 SPRYD3Q8NCJ5 442 aa21.15■□□□□ 0.98
PCIF1-201ENST00000372409 TBC1D2Q9BYX2 928 aa21.15■□□□□ 0.98
PCIF1-201ENST00000372409 ARHGEF40Q8TER5 1519 aa21.15■□□□□ 0.98
PCIF1-201ENST00000372409 PNPLA6Q8IY17 1366 aa21.15■□□□□ 0.98
PCIF1-201ENST00000372409 POLKQ9UBT6 870 aa21.14■□□□□ 0.98
PCIF1-201ENST00000372409 KIF20BQ96Q89 1820 aa21.14■□□□□ 0.98
PCIF1-201ENST00000372409 THUMPD2Q9BTF0 503 aaKnown RBP21.13■□□□□ 0.97
PCIF1-201ENST00000372409 RSPH6AQ9H0K4 717 aa21.13■□□□□ 0.97
PCIF1-201ENST00000372409 LRRC7Q96NW7 1537 aa21.13■□□□□ 0.97
PCIF1-201ENST00000372409 ZBTB40Q9NUA8 1239 aa21.13■□□□□ 0.97
PCIF1-201ENST00000372409 MLECQ14165 292 aa21.12■□□□□ 0.97
PCIF1-201ENST00000372409 C22orf23Q9BZE7 217 aa21.12■□□□□ 0.97
PCIF1-201ENST00000372409 FAM69CQ0P6D2 419 aa21.11■□□□□ 0.97
PCIF1-201ENST00000372409 PHACTR3Q96KR7 559 aa21.11■□□□□ 0.97
PCIF1-201ENST00000372409 ALDH1L2Q3SY69 923 aa21.1■□□□□ 0.97
PCIF1-201ENST00000372409 SMC5Q8IY18 1101 aa21.1■□□□□ 0.97
PCIF1-201ENST00000372409 EMILIN1Q9Y6C2 1016 aa21.1■□□□□ 0.97
PCIF1-201ENST00000372409 ANTXR1Q9H6X2 564 aa21.09■□□□□ 0.97
PCIF1-201ENST00000372409 ELL2O00472 640 aaPredicted RBP21.09■□□□□ 0.97
PCIF1-201ENST00000372409 LNPKQ9C0E8 428 aa21.08■□□□□ 0.97
PCIF1-201ENST00000372409 FAM135BQ49AJ0 1406 aa21.08■□□□□ 0.97
PCIF1-201ENST00000372409 NFE2L2Q16236 605 aa21.08■□□□□ 0.96
PCIF1-201ENST00000372409 NME9Q86XW9 330 aa21.07■□□□□ 0.96
PCIF1-201ENST00000372409 ZRANB1Q9UGI0 708 aa21.07■□□□□ 0.96
PCIF1-201ENST00000372409 RIMS2Q9UQ26 1411 aa21.06■□□□□ 0.96
PCIF1-201ENST00000372409 MAP2P11137 1827 aaKnown RBP21.06■□□□□ 0.96
PCIF1-201ENST00000372409 ATP7BP35670 1465 aa21.05■□□□□ 0.96
PCIF1-201ENST00000372409 TSPYL6Q8N831 410 aa21.05■□□□□ 0.96
PCIF1-201ENST00000372409 C1orf115Q9H7X2 142 aa21.05■□□□□ 0.96
PCIF1-201ENST00000372409 A2ML1A8K2U0 1454 aa21.04■□□□□ 0.96
PCIF1-201ENST00000372409 NUCB1Q02818 461 aa21.04■□□□□ 0.96
PCIF1-201ENST00000372409 TXNDC2Q86VQ3 553 aa21.04■□□□□ 0.96
PCIF1-201ENST00000372409 CDC42BPGQ6DT37 1551 aa21.03■□□□□ 0.96
PCIF1-201ENST00000372409 PPIP5K1Q6PFW1 1433 aa21.03■□□□□ 0.96
PCIF1-201ENST00000372409 CALD1Q05682 793 aaKnown RBP21.03■□□□□ 0.96
PCIF1-201ENST00000372409 TSPOAP1O95153 1857 aa21.03■□□□□ 0.96
PCIF1-201ENST00000372409 WASLO00401 505 aaPredicted RBP21.03■□□□□ 0.96
PCIF1-201ENST00000372409 VAMP4O75379 141 aa21.03■□□□□ 0.96
PCIF1-201ENST00000372409 NCKAP5LQ9HCH0 1330 aa21.03■□□□□ 0.96
PCIF1-201ENST00000372409 CHD1LQ86WJ1 897 aa21.02■□□□□ 0.96
PCIF1-201ENST00000372409 GNAI1P63096 354 aa21.02■□□□□ 0.96
PCIF1-201ENST00000372409 RRS1Q15050 365 aaKnown RBP21.02■□□□□ 0.96
PCIF1-201ENST00000372409 ZNF428Q96B54 188 aa21.02■□□□□ 0.96
PCIF1-201ENST00000372409 IL13P35225 146 aa21.01■□□□□ 0.95
PCIF1-201ENST00000372409 ANKRD45Q5TZF3 282 aa21.01■□□□□ 0.95
PCIF1-201ENST00000372409 MRPL50Q8N5N7 158 aaKnown RBP21.01■□□□□ 0.95
PCIF1-201ENST00000372409 MBIPQ9NS73 344 aa21.01■□□□□ 0.95
PCIF1-201ENST00000372409 DLC1Q96QB1 1528 aa21.01■□□□□ 0.95
PCIF1-201ENST00000372409 COG3Q96JB2 828 aa21■□□□□ 0.95
PCIF1-201ENST00000372409 EDC4Q6P2E9 1401 aaKnown RBP20.99■□□□□ 0.95
PCIF1-201ENST00000372409 IFT57Q9NWB7 429 aa20.99■□□□□ 0.95
PCIF1-201ENST00000372409 ZBTB7BO15156 539 aaPredicted RBP20.99■□□□□ 0.95
PCIF1-201ENST00000372409 NUDT16Q96DE0 195 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms