RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 CCDC184Q52MB2 194 aa28.71■■■□□ 2.19
RAPGEF1-203ENST00000372195 CCDC30Q5VVM6 783 aa28.71■■■□□ 2.19
RAPGEF1-203ENST00000372195 ARGLU1Q9NWB6 273 aaPredicted RBP28.71■■■□□ 2.19
RAPGEF1-203ENST00000372195 SIL1Q9H173 461 aa28.7■■■□□ 2.19
RAPGEF1-203ENST00000372195 CLASRPQ8N2M8 674 aaKnown RBP28.69■■■□□ 2.18
RAPGEF1-203ENST00000372195 AK7Q96M32 723 aa28.69■■■□□ 2.18
RAPGEF1-203ENST00000372195 EPS15P42566 896 aa28.69■■■□□ 2.18
RAPGEF1-203ENST00000372195 ABTB2Q8N961 1025 aa28.68■■■□□ 2.18
RAPGEF1-203ENST00000372195 SLC4A2P04920 1241 aa28.67■■■□□ 2.18
RAPGEF1-203ENST00000372195 CT47A1Q5JQC4 288 aaPredicted RBP28.67■■■□□ 2.18
RAPGEF1-203ENST00000372195 FAM69CQ0P6D2 419 aa28.67■■■□□ 2.18
RAPGEF1-203ENST00000372195 BRMS1Q9HCU9 246 aa28.66■■■□□ 2.18
RAPGEF1-203ENST00000372195 PRAM1Q96QH2 718 aa28.65■■■□□ 2.18
RAPGEF1-203ENST00000372195 ARHGAP5Q13017 1502 aa28.65■■■□□ 2.18
RAPGEF1-203ENST00000372195 SLC12A5Q9H2X9 1139 aa28.65■■■□□ 2.18
RAPGEF1-203ENST00000372195 NBPF8Q3BBV2 869 aa28.64■■■□□ 2.18
RAPGEF1-203ENST00000372195 ATF3P18847 181 aa28.64■■■□□ 2.17
RAPGEF1-203ENST00000372195 AFAP1Q8N556 730 aa28.64■■■□□ 2.17
RAPGEF1-203ENST00000372195 RBM42Q9BTD8 480 aaKnown RBP28.63■■■□□ 2.17
RAPGEF1-203ENST00000372195 ZFYVE27Q5T4F4 411 aa28.63■■■□□ 2.17
RAPGEF1-203ENST00000372195 GNAI3P08754 354 aa28.63■■■□□ 2.17
RAPGEF1-203ENST00000372195 GNAI2P04899 355 aa28.62■■■□□ 2.17
RAPGEF1-203ENST00000372195 IKQ13123 557 aaPredicted RBP28.62■■■□□ 2.17
RAPGEF1-203ENST00000372195 KINO60870 393 aaKnown RBP28.62■■■□□ 2.17
RAPGEF1-203ENST00000372195 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.172e-6■■■■■ 32.2
RAPGEF1-203ENST00000372195 HSP90B2PQ58FF3 399 aa28.61■■■□□ 2.17
RAPGEF1-203ENST00000372195 ESCO1Q5FWF5 840 aa28.61■■■□□ 2.17
RAPGEF1-203ENST00000372195 TTC39AQ5SRH9 613 aa28.61■■■□□ 2.17
RAPGEF1-203ENST00000372195 AAMPQ13685 434 aa28.6■■■□□ 2.17
RAPGEF1-203ENST00000372195 TXNDC2Q86VQ3 553 aa28.6■■■□□ 2.17
RAPGEF1-203ENST00000372195 RABEP1Q15276 862 aa28.6■■■□□ 2.17
RAPGEF1-203ENST00000372195 OFD1O75665 1012 aa28.6■■■□□ 2.17
RAPGEF1-203ENST00000372195 HSP90AB2PQ58FF8 381 aa28.6■■■□□ 2.17
RAPGEF1-203ENST00000372195 LETM1O95202 739 aaPredicted RBP28.59■■■□□ 2.17
RAPGEF1-203ENST00000372195 SKAP1Q86WV1 359 aa28.59■■■□□ 2.17
RAPGEF1-203ENST00000372195 XBP1P17861 261 aa28.59■■■□□ 2.17
RAPGEF1-203ENST00000372195 CFTRP13569 1480 aa28.58■■■□□ 2.17
RAPGEF1-203ENST00000372195 SULT6B1Q6IMI4 303 aa28.58■■■□□ 2.17
RAPGEF1-203ENST00000372195 GCC1Q96CN9 775 aa28.58■■■□□ 2.17
RAPGEF1-203ENST00000372195 BACH2Q9BYV9 841 aa28.58■■■□□ 2.17
RAPGEF1-203ENST00000372195 ODF2Q5BJF6 829 aa28.57■■■□□ 2.16
RAPGEF1-203ENST00000372195 MYL6BP14649 208 aa28.57■■■□□ 2.16
RAPGEF1-203ENST00000372195 CCDC173Q0VFZ6 552 aa28.57■■■□□ 2.16
RAPGEF1-203ENST00000372195 TBC1D2BQ9UPU7 963 aa28.57■■■□□ 2.16
RAPGEF1-203ENST00000372195 FYCO1Q9BQS8 1478 aa28.56■■■□□ 2.16
RAPGEF1-203ENST00000372195 ACBD3Q9H3P7 528 aa28.56■■■□□ 2.16
RAPGEF1-203ENST00000372195 GAS2L2Q8NHY3 880 aa28.56■■■□□ 2.16
RAPGEF1-203ENST00000372195 STK38Q15208 465 aa28.56■■■□□ 2.16
RAPGEF1-203ENST00000372195 CWC22Q9HCG8 908 aaKnown RBP28.55■■■□□ 2.16
RAPGEF1-203ENST00000372195 NOM1Q5C9Z4 860 aaKnown RBP28.55■■■□□ 2.16
RAPGEF1-203ENST00000372195 CDK19Q9BWU1 502 aa28.55■■■□□ 2.16
RAPGEF1-203ENST00000372195 STRN4Q9NRL3 753 aa28.55■■■□□ 2.16
RAPGEF1-203ENST00000372195 MBD3O95983 291 aa28.54■■■□□ 2.16
RAPGEF1-203ENST00000372195 K7ELQ4 463 aaPredicted RBP28.54■■■□□ 2.16
RAPGEF1-203ENST00000372195 CABP1Q9NZU7 370 aa28.54■■■□□ 2.16
RAPGEF1-203ENST00000372195 KIF6Q6ZMV9 814 aa28.54■■■□□ 2.16
RAPGEF1-203ENST00000372195 LRRCC1Q9C099 1032 aa28.54■■■□□ 2.16
RAPGEF1-203ENST00000372195 CNNM1Q9NRU3 951 aa28.54■■■□□ 2.16
RAPGEF1-203ENST00000372195 FAM177A1Q8N128 213 aaPredicted RBP28.53■■■□□ 2.16
RAPGEF1-203ENST00000372195 CNKSR2Q8WXI2 1034 aa28.53■■■□□ 2.16
RAPGEF1-203ENST00000372195 SART3Q15020 963 aaKnown RBP28.53■■■□□ 2.16
RAPGEF1-203ENST00000372195 PDE3AQ14432 1141 aa28.52■■■□□ 2.16
RAPGEF1-203ENST00000372195 HDGFL1Q5TGJ6 251 aa28.52■■■□□ 2.16
RAPGEF1-203ENST00000372195 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.51■■■□□ 2.159e-7■■■■■ 101.5
RAPGEF1-203ENST00000372195 CYP46A1Q9Y6A2 500 aa28.51■■■□□ 2.15
RAPGEF1-203ENST00000372195 RRBP1Q9P2E9 1410 aaKnown RBP28.51■■■□□ 2.15
RAPGEF1-203ENST00000372195 CHD1LQ86WJ1 897 aa28.51■■■□□ 2.15
RAPGEF1-203ENST00000372195 SERPINC1P01008 464 aa28.51■■■□□ 2.15
RAPGEF1-203ENST00000372195 GRPEL1Q9HAV7 217 aa28.51■■■□□ 2.15
RAPGEF1-203ENST00000372195 SPINK5Q9NQ38 1064 aaPredicted RBP28.51■■■□□ 2.15
RAPGEF1-203ENST00000372195 ZNF396Q96N95 335 aaPredicted RBP28.5■■■□□ 2.15
RAPGEF1-203ENST00000372195 TNMDQ9H2S6 317 aa28.5■■■□□ 2.15
RAPGEF1-203ENST00000372195 RRS1Q15050 365 aaKnown RBP28.5■■■□□ 2.15
RAPGEF1-203ENST00000372195 CASKIN1Q8WXD9 1431 aa28.5■■■□□ 2.15
RAPGEF1-203ENST00000372195 PLEKHO1Q53GL0 409 aaPredicted RBP28.5■■■□□ 2.15
RAPGEF1-203ENST00000372195 MVPQ14764 893 aaKnown RBP28.49■■■□□ 2.15
RAPGEF1-203ENST00000372195 CDK5RAP3Q96JB5 506 aa28.49■■■□□ 2.15
RAPGEF1-203ENST00000372195 OSCARQ8IYS5 282 aa28.49■■■□□ 2.15
RAPGEF1-203ENST00000372195 PNISRQ8TF01 805 aaKnown RBP28.49■■■□□ 2.15
RAPGEF1-203ENST00000372195 MAGEC2Q9UBF1 373 aaPredicted RBP28.48■■■□□ 2.15
RAPGEF1-203ENST00000372195 CWC27Q6UX04 472 aaKnown RBP28.48■■■□□ 2.15
RAPGEF1-203ENST00000372195 ME1P48163 572 aa28.47■■■□□ 2.15
RAPGEF1-203ENST00000372195 ATP2B2Q01814 1243 aa28.47■■■□□ 2.15
RAPGEF1-203ENST00000372195 IL1RAPL2Q9NP60 686 aa28.47■■■□□ 2.15
RAPGEF1-203ENST00000372195 CCDC158Q5M9N0 1113 aa28.47■■■□□ 2.15
RAPGEF1-203ENST00000372195 HIP1O00291 1037 aa28.47■■■□□ 2.15
RAPGEF1-203ENST00000372195 MAP7D2Q96T17 732 aa28.47■■■□□ 2.15
RAPGEF1-203ENST00000372195 ARAP1Q96P48 1450 aa28.46■■■□□ 2.15
RAPGEF1-203ENST00000372195 H0YHG0 523 aa28.46■■■□□ 2.15
RAPGEF1-203ENST00000372195 MCM2P49736 904 aa28.46■■■□□ 2.15
RAPGEF1-203ENST00000372195 CDR1P51861 262 aa28.46■■■□□ 2.15
RAPGEF1-203ENST00000372195 FILIP1LQ4L180 1135 aa28.46■■■□□ 2.15
RAPGEF1-203ENST00000372195 ATF7IPQ6VMQ6 1270 aa28.46■■■□□ 2.15
RAPGEF1-203ENST00000372195 DHX37Q8IY37 1157 aaKnown RBP28.45■■■□□ 2.15
RAPGEF1-203ENST00000372195 ERC1Q8IUD2 1116 aa28.45■■■□□ 2.14
RAPGEF1-203ENST00000372195 MIS18AQ9NYP9 233 aa28.45■■■□□ 2.14
RAPGEF1-203ENST00000372195 NUP133Q8WUM0 1156 aa28.45■■■□□ 2.14
RAPGEF1-203ENST00000372195 AACSQ86V21 672 aa28.44■■■□□ 2.14
RAPGEF1-203ENST00000372195 SMARCE1Q969G3 411 aa28.44■■■□□ 2.14
RAPGEF1-203ENST00000372195 UQCRHLA0A096LP55 91 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms