RNA–Protein interactions for RNA: ENST00000371723.4

SDCCAG3-203, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-203ENST00000371723 AKAP12Q02952 1782 aa36.71■■■■□ 3.47
SDCCAG3-203ENST00000371723 ATAD2Q6PL18 1390 aa36.71■■■■□ 3.47
SDCCAG3-203ENST00000371723 ST20-MTHFSA0A0A6YYL1 179 aa36.69■■■■□ 3.46
SDCCAG3-203ENST00000371723 PLEKHG5O94827 1062 aa36.69■■■■□ 3.46
SDCCAG3-203ENST00000371723 HAP1P54257 671 aaPredicted RBP36.69■■■■□ 3.46
SDCCAG3-203ENST00000371723 USP21Q9UK80 565 aa36.69■■■■□ 3.46
SDCCAG3-203ENST00000371723 TESK2Q96S53 571 aa36.68■■■■□ 3.46
SDCCAG3-203ENST00000371723 QTRT2Q9H974 415 aaKnown RBP36.67■■■■□ 3.46
SDCCAG3-203ENST00000371723 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.67■■■■□ 3.46
SDCCAG3-203ENST00000371723 BCL9LQ86UU0 1499 aa36.67■■■■□ 3.46
SDCCAG3-203ENST00000371723 BRD4O60885 1362 aaPredicted RBP36.66■■■■□ 3.46
SDCCAG3-203ENST00000371723 USP6P35125 1406 aa36.66■■■■□ 3.46
SDCCAG3-203ENST00000371723 USP47Q96K76 1375 aa36.66■■■■□ 3.46
SDCCAG3-203ENST00000371723 SLIT2O94813 1529 aa36.65■■■■□ 3.46
SDCCAG3-203ENST00000371723 RXRBP28702 533 aa36.65■■■■□ 3.46
SDCCAG3-203ENST00000371723 PLCH1Q4KWH8 1693 aa36.64■■■■□ 3.46
SDCCAG3-203ENST00000371723 PHRF1Q9P1Y6 1649 aaKnown RBP36.64■■■■□ 3.46
SDCCAG3-203ENST00000371723 NWD2Q9ULI1 1742 aa36.63■■■■□ 3.45
SDCCAG3-203ENST00000371723 ATRNO75882 1429 aa36.61■■■■□ 3.45
SDCCAG3-203ENST00000371723 SSH2Q76I76 1423 aa36.61■■■■□ 3.45
SDCCAG3-203ENST00000371723 PUS7Q96PZ0 661 aaKnown RBP36.61■■■■□ 3.45
SDCCAG3-203ENST00000371723 TRPC5Q9UL62 973 aaPredicted RBP36.6■■■■□ 3.45
SDCCAG3-203ENST00000371723 CDK12Q9NYV4 1490 aaPredicted RBP36.59■■■■□ 3.45
SDCCAG3-203ENST00000371723 RBM6P78332 1123 aaKnown RBP36.59■■■■□ 3.45
SDCCAG3-203ENST00000371723 ABTB2Q8N961 1025 aa36.59■■■■□ 3.45
SDCCAG3-203ENST00000371723 CPSF1Q10570 1443 aaKnown RBP36.59■■■■□ 3.45
SDCCAG3-203ENST00000371723 SLC24A1O60721 1099 aa36.58■■■■□ 3.45
SDCCAG3-203ENST00000371723 ZNF692Q9BU19 519 aaPredicted RBP36.58■■■■□ 3.45
SDCCAG3-203ENST00000371723 MON2Q7Z3U7 1717 aa36.58■■■■□ 3.45
SDCCAG3-203ENST00000371723 NUTM2GQ5VZR2 741 aa36.57■■■■□ 3.44
SDCCAG3-203ENST00000371723 COL14A1Q05707 1796 aaKnown RBP36.56■■■■□ 3.44
SDCCAG3-203ENST00000371723 FAM83GA6ND36 823 aa36.56■■■■□ 3.44
SDCCAG3-203ENST00000371723 NRKQ7Z2Y5 1582 aa36.56■■■■□ 3.44
SDCCAG3-203ENST00000371723 UNC5CLQ8IV45 518 aa36.55■■■■□ 3.44
SDCCAG3-203ENST00000371723 PIK3C2AO00443 1686 aa36.54■■■■□ 3.44
SDCCAG3-203ENST00000371723 CD163L1Q9NR16 1453 aa36.53■■■■□ 3.44
SDCCAG3-203ENST00000371723 USP19O94966 1318 aa36.52■■■■□ 3.44
SDCCAG3-203ENST00000371723 NRAPQ86VF7 1730 aa36.51■■■■□ 3.44
SDCCAG3-203ENST00000371723 NLRP13Q86W25 1043 aa36.49■■■■□ 3.43
SDCCAG3-203ENST00000371723 KTN1Q86UP2 1357 aaKnown RBP36.49■■■■□ 3.43
SDCCAG3-203ENST00000371723 TMC1Q8TDI8 760 aa36.48■■■■□ 3.43
SDCCAG3-203ENST00000371723 SLC12A5Q9H2X9 1139 aa36.48■■■■□ 3.43
SDCCAG3-203ENST00000371723 TTC21BQ7Z4L5 1316 aa36.48■■■■□ 3.43
SDCCAG3-203ENST00000371723 RGS12O14924 1447 aa36.47■■■■□ 3.43
SDCCAG3-203ENST00000371723 KIAA0232Q92628 1395 aa36.45■■■■□ 3.43
SDCCAG3-203ENST00000371723 TMF1P82094 1093 aa36.45■■■■□ 3.43
SDCCAG3-203ENST00000371723 GJD4Q96KN9 370 aaPredicted RBP36.45■■■■□ 3.43
SDCCAG3-203ENST00000371723 TTC21AQ8NDW8 1320 aa36.44■■■■□ 3.42
SDCCAG3-203ENST00000371723 GLI3P10071 1580 aa36.44■■■■□ 3.42
SDCCAG3-203ENST00000371723 NINLQ9Y2I6 1382 aa36.43■■■■□ 3.42
SDCCAG3-203ENST00000371723 NLRP6P59044 892 aa36.43■■■■□ 3.42
SDCCAG3-203ENST00000371723 PRDM11Q9NQV5 511 aa36.43■■■■□ 3.42
SDCCAG3-203ENST00000371723 SLIT3O75094 1523 aa36.43■■■■□ 3.42
SDCCAG3-203ENST00000371723 BTG4Q9NY30 223 aa36.42■■■■□ 3.42
SDCCAG3-203ENST00000371723 ZC3H6P61129 1189 aaKnown RBP36.41■■■■□ 3.42
SDCCAG3-203ENST00000371723 VPS72Q15906 364 aa36.41■■■■□ 3.42
SDCCAG3-203ENST00000371723 GCP02774 474 aa36.4■■■■□ 3.42
SDCCAG3-203ENST00000371723 CPDO75976 1380 aa36.4■■■■□ 3.42
SDCCAG3-203ENST00000371723 HDGFL2Q7Z4V5 671 aaPredicted RBP36.39■■■■□ 3.42
SDCCAG3-203ENST00000371723 A0A1W2PP64 1363 aa36.39■■■■□ 3.42
SDCCAG3-203ENST00000371723 TERF2IPQ9NYB0 399 aa36.38■■■■□ 3.41
SDCCAG3-203ENST00000371723 USP54Q70EL1 1684 aa36.37■■■■□ 3.41
SDCCAG3-203ENST00000371723 CHRNA2Q15822 529 aa36.36■■■■□ 3.41
SDCCAG3-203ENST00000371723 LMO7Q8WWI1 1683 aa36.35■■■■□ 3.41
SDCCAG3-203ENST00000371723 EDC4Q6P2E9 1401 aaKnown RBP36.34■■■■□ 3.41
SDCCAG3-203ENST00000371723 CDCA8Q53HL2 280 aa36.33■■■■□ 3.41
SDCCAG3-203ENST00000371723 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.32■■■■□ 3.4
SDCCAG3-203ENST00000371723 USP31Q70CQ4 1352 aa36.3■■■■□ 3.4
SDCCAG3-203ENST00000371723 CAMTA1Q9Y6Y1 1673 aa36.29■■■■□ 3.4
SDCCAG3-203ENST00000371723 EIF4G2P78344 907 aaKnown RBP eCLIP36.29■■■■□ 3.4
SDCCAG3-203ENST00000371723 MYOM1P52179 1685 aa36.29■■■■□ 3.4
SDCCAG3-203ENST00000371723 CCDC9Q9Y3X0 531 aaKnown RBP36.28■■■■□ 3.4
SDCCAG3-203ENST00000371723 BRWD3Q6RI45 1802 aa36.28■■■■□ 3.4
SDCCAG3-203ENST00000371723 ANKRD36BQ8N2N9 1353 aa36.27■■■■□ 3.4
SDCCAG3-203ENST00000371723 COL18A1P39060 1754 aa36.27■■■■□ 3.4
SDCCAG3-203ENST00000371723 HSPA5P11021 654 aaKnown RBP36.26■■■■□ 3.4
SDCCAG3-203ENST00000371723 NME9Q86XW9 330 aa36.26■■■■□ 3.4
SDCCAG3-203ENST00000371723 ZRANB1Q9UGI0 708 aa36.26■■■■□ 3.4
SDCCAG3-203ENST00000371723 KCNH5Q8NCM2 988 aa36.25■■■■□ 3.39
SDCCAG3-203ENST00000371723 NFAT5O94916 1531 aa36.24■■■■□ 3.39
SDCCAG3-203ENST00000371723 ONECUT3O60422 494 aaPredicted RBP36.24■■■■□ 3.39
SDCCAG3-203ENST00000371723 SPATA31A5Q5VU36 1347 aa36.23■■■■□ 3.39
SDCCAG3-203ENST00000371723 SPATA31A7Q8IWB4 1347 aa36.23■■■■□ 3.39
SDCCAG3-203ENST00000371723 AATKQ6ZMQ8 1374 aa36.21■■■■□ 3.39
SDCCAG3-203ENST00000371723 RGPD5Q99666 1765 aa36.2■■■■□ 3.39
SDCCAG3-203ENST00000371723 STRN4Q9NRL3 753 aa36.2■■■■□ 3.39
SDCCAG3-203ENST00000371723 ARHGEF25Q86VW2 580 aa36.19■■■■□ 3.38
SDCCAG3-203ENST00000371723 UPF1Q92900 1129 aaKnown RBP eCLIP36.18■■■■□ 3.38
SDCCAG3-203ENST00000371723 OVOS2A0A0J9YW53 1432 aa36.17■■■■□ 3.38
SDCCAG3-203ENST00000371723 OVOS2Q6IE36 1432 aa36.17■■■■□ 3.38
SDCCAG3-203ENST00000371723 COL5A2P05997 1499 aaPredicted RBP36.17■■■■□ 3.38
SDCCAG3-203ENST00000371723 SPATA31A1Q5TZJ5 1347 aa36.16■■■■□ 3.38
SDCCAG3-203ENST00000371723 SOX12O15370 315 aa36.16■■■■□ 3.38
SDCCAG3-203ENST00000371723 EVA1CP58658 441 aa36.16■■■■□ 3.38
SDCCAG3-203ENST00000371723 SEPT12Q8IYM1 358 aa36.16■■■■□ 3.38
SDCCAG3-203ENST00000371723 LTN1O94822 1766 aa36.16■■■■□ 3.38
SDCCAG3-203ENST00000371723 ZBTB7CA1YPR0 619 aa36.15■■■■□ 3.38
SDCCAG3-203ENST00000371723 EP400Q96L91 3159 aa36.15■■■■□ 3.38
SDCCAG3-203ENST00000371723 FAM98CQ17RN3 349 aaKnown RBP36.13■■■■□ 3.37
SDCCAG3-203ENST00000371723 THSD7AQ9UPZ6 1657 aa36.13■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms