RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SAMD1Q6SPF0 538 aaPredicted RBP17.93■□□□□ 0.46
NDC1-201ENST00000371429 RALYLQ86SE5 291 aaKnown RBP17.93■□□□□ 0.46
NDC1-201ENST00000371429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.93■□□□□ 0.46
NDC1-201ENST00000371429 CUL7Q14999 1698 aa17.93■□□□□ 0.46
NDC1-201ENST00000371429 PHF14O94880 888 aa17.93■□□□□ 0.46
NDC1-201ENST00000371429 IDI1Q13907 227 aa17.93■□□□□ 0.46
NDC1-201ENST00000371429 DENND4BO75064 1496 aaPredicted RBP17.92■□□□□ 0.46
NDC1-201ENST00000371429 CDCA7LQ96GN5 454 aa17.92■□□□□ 0.46
NDC1-201ENST00000371429 CWC22Q9HCG8 908 aaKnown RBP17.92■□□□□ 0.46
NDC1-201ENST00000371429 AMOTL2Q9Y2J4 779 aa17.92■□□□□ 0.46
NDC1-201ENST00000371429 TSR2Q969E8 191 aaKnown RBP17.92■□□□□ 0.46
NDC1-201ENST00000371429 TBC1D2BQ9UPU7 963 aa17.91■□□□□ 0.46
NDC1-201ENST00000371429 CAMSAP2Q08AD1 1489 aa17.91■□□□□ 0.46
NDC1-201ENST00000371429 PES1O00541 588 aaKnown RBP17.91■□□□□ 0.46
NDC1-201ENST00000371429 NAIPQ13075 1403 aa17.91■□□□□ 0.46
NDC1-201ENST00000371429 TPD52L1Q16890 204 aaPredicted RBP17.9■□□□□ 0.46
NDC1-201ENST00000371429 CNNM1Q9NRU3 951 aa17.9■□□□□ 0.46
NDC1-201ENST00000371429 AKNAQ7Z591 1439 aa17.9■□□□□ 0.46
NDC1-201ENST00000371429 FOXO3O43524 673 aa17.89■□□□□ 0.46
NDC1-201ENST00000371429 FSD1Q9BTV5 496 aa17.89■□□□□ 0.46
NDC1-201ENST00000371429 KIF14Q15058 1648 aa17.89■□□□□ 0.45
NDC1-201ENST00000371429 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
NDC1-201ENST00000371429 GOLGA6L3A6NEY3 463 aa17.88■□□□□ 0.45
NDC1-201ENST00000371429 PHF8Q9UPP1 1060 aa17.88■□□□□ 0.45
NDC1-201ENST00000371429 MYL6BP14649 208 aa17.88■□□□□ 0.45
NDC1-201ENST00000371429 WWC1Q8IX03 1113 aa17.87■□□□□ 0.45
NDC1-201ENST00000371429 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
NDC1-201ENST00000371429 FANCAO15360 1455 aa17.87■□□□□ 0.45
NDC1-201ENST00000371429 GNAI2P04899 355 aa17.87■□□□□ 0.45
NDC1-201ENST00000371429 TSHZ2Q9NRE2 1034 aa17.87■□□□□ 0.45
NDC1-201ENST00000371429 ABCC5O15440 1437 aa17.87■□□□□ 0.45
NDC1-201ENST00000371429 SRCIN1Q9C0H9 1055 aa17.86■□□□□ 0.45
NDC1-201ENST00000371429 FCHSD2O94868 740 aa17.86■□□□□ 0.45
NDC1-201ENST00000371429 BTBD11A6QL63 1104 aa17.86■□□□□ 0.45
NDC1-201ENST00000371429 DDX11L8A8MPP1 907 aa17.86■□□□□ 0.45
NDC1-201ENST00000371429 SLC4A3P48751 1232 aa17.86■□□□□ 0.45
NDC1-201ENST00000371429 CNTROBQ8N137 903 aa17.86■□□□□ 0.45
NDC1-201ENST00000371429 DNAJC2Q99543 621 aaKnown RBP17.86■□□□□ 0.45
NDC1-201ENST00000371429 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
NDC1-201ENST00000371429 ADAMTS2O95450 1211 aa17.86■□□□□ 0.45
NDC1-201ENST00000371429 CEP89Q96ST8 783 aa17.86■□□□□ 0.45
NDC1-201ENST00000371429 PCF11O94913 1555 aaKnown RBP17.85■□□□□ 0.45
NDC1-201ENST00000371429 ERC1Q8IUD2 1116 aa17.85■□□□□ 0.45
NDC1-201ENST00000371429 GNL3LQ9NVN8 582 aaKnown RBP17.85■□□□□ 0.45
NDC1-201ENST00000371429 NINLQ9Y2I6 1382 aa17.84■□□□□ 0.45
NDC1-201ENST00000371429 NSD3Q9BZ95 1437 aa17.84■□□□□ 0.45
NDC1-201ENST00000371429 DEKP35659 375 aaKnown RBP17.84■□□□□ 0.45
NDC1-201ENST00000371429 CCT4P50991 539 aaKnown RBP17.84■□□□□ 0.45
NDC1-201ENST00000371429 SAFBQ15424 915 aaKnown RBP eCLIP17.84■□□□□ 0.45
NDC1-201ENST00000371429 NOC3LQ8WTT2 800 aaKnown RBP17.84■□□□□ 0.45
NDC1-201ENST00000371429 NOB1Q9ULX3 412 aaKnown RBP17.84■□□□□ 0.45
NDC1-201ENST00000371429 ZNF428Q96B54 188 aa17.84■□□□□ 0.45
NDC1-201ENST00000371429 WDR63Q8IWG1 891 aa17.83■□□□□ 0.45
NDC1-201ENST00000371429 BECN2A8MW95 431 aa17.83■□□□□ 0.44
NDC1-201ENST00000371429 CDC45O75419 566 aa17.83■□□□□ 0.44
NDC1-201ENST00000371429 MPHOSPH8Q99549 860 aa17.83■□□□□ 0.44
NDC1-201ENST00000371429 SMC3Q9UQE7 1217 aa17.83■□□□□ 0.44
NDC1-201ENST00000371429 VPS37CA5D8V6 355 aaPredicted RBP17.83■□□□□ 0.44
NDC1-201ENST00000371429 CCDC158Q5M9N0 1113 aa17.83■□□□□ 0.44
NDC1-201ENST00000371429 CCDC47Q96A33 483 aaKnown RBP17.83■□□□□ 0.44
NDC1-201ENST00000371429 MTMR7Q9Y216 660 aa17.83■□□□□ 0.44
NDC1-201ENST00000371429 ADGRF5Q8IZF2 1346 aa17.82■□□□□ 0.44
NDC1-201ENST00000371429 PDE4CQ08493 712 aa17.82■□□□□ 0.44
NDC1-201ENST00000371429 C1orf115Q9H7X2 142 aa17.82■□□□□ 0.44
NDC1-201ENST00000371429 CCDC43Q96MW1 224 aaKnown RBP17.82■□□□□ 0.44
NDC1-201ENST00000371429 HMGB2P26583 209 aaKnown RBP17.82■□□□□ 0.44
NDC1-201ENST00000371429 IKQ13123 557 aaPredicted RBP17.82■□□□□ 0.44
NDC1-201ENST00000371429 GOLGA6L19H0YKK7 550 aa17.81■□□□□ 0.44
NDC1-201ENST00000371429 WASLO00401 505 aaPredicted RBP17.81■□□□□ 0.44
NDC1-201ENST00000371429 TPM3P06753 285 aa17.81■□□□□ 0.44
NDC1-201ENST00000371429 GNAT3A8MTJ3 354 aa17.81■□□□□ 0.44
NDC1-201ENST00000371429 NGLY1Q96IV0 654 aa17.81■□□□□ 0.44
NDC1-201ENST00000371429 CCDC57Q2TAC2 916 aa17.81■□□□□ 0.44
NDC1-201ENST00000371429 TSR1Q2NL82 804 aaKnown RBP17.81■□□□□ 0.44
NDC1-201ENST00000371429 STARD3NLO95772 234 aa17.8■□□□□ 0.44
NDC1-201ENST00000371429 SART3Q15020 963 aaKnown RBP17.8■□□□□ 0.44
NDC1-201ENST00000371429 PTCD1O75127 700 aaKnown RBP17.8■□□□□ 0.44
NDC1-201ENST00000371429 NFE2L2Q16236 605 aa17.8■□□□□ 0.44
NDC1-201ENST00000371429 TTC39AQ5SRH9 613 aa17.8■□□□□ 0.44
NDC1-201ENST00000371429 NME9Q86XW9 330 aa17.8■□□□□ 0.44
NDC1-201ENST00000371429 SIL1Q9H173 461 aa17.8■□□□□ 0.44
NDC1-201ENST00000371429 TPM2P07951 284 aa17.8■□□□□ 0.44
NDC1-201ENST00000371429 CT47B1P0C2W7 299 aaPredicted RBP17.8■□□□□ 0.44
NDC1-201ENST00000371429 PDE3AQ14432 1141 aa17.8■□□□□ 0.44
NDC1-201ENST00000371429 DHX29Q7Z478 1369 aaKnown RBP17.8■□□□□ 0.44
NDC1-201ENST00000371429 NCOA1Q15788 1441 aa17.79■□□□□ 0.44
NDC1-201ENST00000371429 BICD2Q8TD16 824 aa17.79■□□□□ 0.44
NDC1-201ENST00000371429 PSMA5P28066 241 aa17.78■□□□□ 0.44
NDC1-201ENST00000371429 BICDL1Q6ZP65 573 aa17.78■□□□□ 0.44
NDC1-201ENST00000371429 C22orf23Q9BZE7 217 aa17.78■□□□□ 0.44
NDC1-201ENST00000371429 BCAR3O75815 825 aa17.78■□□□□ 0.44
NDC1-201ENST00000371429 FOSBP53539 338 aa17.78■□□□□ 0.44
NDC1-201ENST00000371429 TMOD3Q9NYL9 352 aa17.78■□□□□ 0.44
NDC1-201ENST00000371429 SLC3A2P08195 630 aaKnown RBP17.78■□□□□ 0.44
NDC1-201ENST00000371429 HIP1O00291 1037 aa17.77■□□□□ 0.44
NDC1-201ENST00000371429 CADPS2Q86UW7 1296 aa17.77■□□□□ 0.43
NDC1-201ENST00000371429 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.77■□□□□ 0.43
NDC1-201ENST00000371429 GCC1Q96CN9 775 aa17.77■□□□□ 0.43
NDC1-201ENST00000371429 SKOR2Q2VWA4 1001 aaPredicted RBP17.76■□□□□ 0.43
NDC1-201ENST00000371429 ATF7IPQ6VMQ6 1270 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms