RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 TRPM1Q7Z4N2 1603 aa24.52■■□□□ 1.52
LRRC42-202ENST00000371368 POLR3AO14802 1390 aaPredicted RBP24.52■■□□□ 1.52
LRRC42-202ENST00000371368 ATAD2Q6PL18 1390 aa24.52■■□□□ 1.52
LRRC42-202ENST00000371368 TRIM26Q12899 539 aaPredicted RBP24.51■■□□□ 1.51
LRRC42-202ENST00000371368 PLCH1Q4KWH8 1693 aa24.5■■□□□ 1.51
LRRC42-202ENST00000371368 TOPAZ1Q8N9V7 1692 aa24.5■■□□□ 1.51
LRRC42-202ENST00000371368 CABP2Q9NPB3 220 aa24.5■■□□□ 1.51
LRRC42-202ENST00000371368 GLI3P10071 1580 aa24.5■■□□□ 1.51
LRRC42-202ENST00000371368 NWD2Q9ULI1 1742 aa24.49■■□□□ 1.51
LRRC42-202ENST00000371368 ROCK2O75116 1388 aaKnown RBP24.48■■□□□ 1.51
LRRC42-202ENST00000371368 QRICH2Q9H0J4 1663 aa24.48■■□□□ 1.51
LRRC42-202ENST00000371368 CCDC9Q9Y3X0 531 aaKnown RBP24.48■■□□□ 1.51
LRRC42-202ENST00000371368 BTG4Q9NY30 223 aa24.47■■□□□ 1.51
LRRC42-202ENST00000371368 PPIP5K1Q6PFW1 1433 aa24.45■■□□□ 1.51
LRRC42-202ENST00000371368 CRYBG1Q9Y4K1 1723 aa24.45■■□□□ 1.5
LRRC42-202ENST00000371368 NUTM2GQ5VZR2 741 aa24.45■■□□□ 1.5
LRRC42-202ENST00000371368 SEPT12Q8IYM1 358 aa24.43■■□□□ 1.5
LRRC42-202ENST00000371368 PRDM11Q9NQV5 511 aa24.43■■□□□ 1.5
LRRC42-202ENST00000371368 CABP1Q9NZU7 370 aa24.43■■□□□ 1.5
LRRC42-202ENST00000371368 COL14A1Q05707 1796 aaKnown RBP24.43■■□□□ 1.5
LRRC42-202ENST00000371368 EVC2Q86UK5 1308 aa24.42■■□□□ 1.5
LRRC42-202ENST00000371368 ONECUT3O60422 494 aaPredicted RBP24.42■■□□□ 1.5
LRRC42-202ENST00000371368 ABTB2Q8N961 1025 aa24.42■■□□□ 1.5
LRRC42-202ENST00000371368 NRAPQ86VF7 1730 aa24.4■■□□□ 1.5
LRRC42-202ENST00000371368 KIAA0232Q92628 1395 aa24.39■■□□□ 1.49
LRRC42-202ENST00000371368 TONSLQ96HA7 1378 aa24.39■■□□□ 1.49
LRRC42-202ENST00000371368 ZC3H6P61129 1189 aaKnown RBP24.38■■□□□ 1.49
LRRC42-202ENST00000371368 PHRF1Q9P1Y6 1649 aaKnown RBP24.37■■□□□ 1.49
LRRC42-202ENST00000371368 CHRNA2Q15822 529 aa24.37■■□□□ 1.49
LRRC42-202ENST00000371368 CCDC125Q86Z20 511 aa24.37■■□□□ 1.49
LRRC42-202ENST00000371368 BRD4O60885 1362 aaPredicted RBP24.37■■□□□ 1.49
LRRC42-202ENST00000371368 NLRP13Q86W25 1043 aa24.36■■□□□ 1.49
LRRC42-202ENST00000371368 BRWD3Q6RI45 1802 aa24.35■■□□□ 1.49
LRRC42-202ENST00000371368 FAM98CQ17RN3 349 aaKnown RBP24.35■■□□□ 1.49
LRRC42-202ENST00000371368 CARD11Q9BXL7 1154 aa24.35■■□□□ 1.49
LRRC42-202ENST00000371368 SPATA31A5Q5VU36 1347 aa24.34■■□□□ 1.49
LRRC42-202ENST00000371368 SPATA31A7Q8IWB4 1347 aa24.34■■□□□ 1.49
LRRC42-202ENST00000371368 KRT27Q7Z3Y8 459 aa24.33■■□□□ 1.49
LRRC42-202ENST00000371368 USP6P35125 1406 aa24.33■■□□□ 1.49
LRRC42-202ENST00000371368 USP19O94966 1318 aa24.33■■□□□ 1.48
LRRC42-202ENST00000371368 A0A0G2JS52 829 aa24.32■■□□□ 1.48
LRRC42-202ENST00000371368 MYT1Q01538 1121 aa24.32■■□□□ 1.48
LRRC42-202ENST00000371368 GCP02774 474 aa24.31■■□□□ 1.48
LRRC42-202ENST00000371368 NLRP6P59044 892 aa24.3■■□□□ 1.48
LRRC42-202ENST00000371368 ZNF692Q9BU19 519 aaPredicted RBP24.3■■□□□ 1.48
LRRC42-202ENST00000371368 STRN4Q9NRL3 753 aa24.3■■□□□ 1.48
LRRC42-202ENST00000371368 NRKQ7Z2Y5 1582 aa24.29■■□□□ 1.48
LRRC42-202ENST00000371368 CPDO75976 1380 aa24.29■■□□□ 1.48
LRRC42-202ENST00000371368 EVA1CP58658 441 aa24.28■■□□□ 1.48
LRRC42-202ENST00000371368 SSH2Q76I76 1423 aa24.27■■□□□ 1.48
LRRC42-202ENST00000371368 SPATA31A1Q5TZJ5 1347 aa24.27■■□□□ 1.48
LRRC42-202ENST00000371368 SBNO2Q9Y2G9 1366 aa24.27■■□□□ 1.48
LRRC42-202ENST00000371368 BLMP54132 1417 aaPredicted RBP24.27■■□□□ 1.48
LRRC42-202ENST00000371368 TTC21BQ7Z4L5 1316 aa24.24■■□□□ 1.47
LRRC42-202ENST00000371368 CAMTA1Q9Y6Y1 1673 aa24.24■■□□□ 1.47
LRRC42-202ENST00000371368 EP400Q96L91 3159 aa24.23■■□□□ 1.47
LRRC42-202ENST00000371368 CPSF1Q10570 1443 aaKnown RBP24.22■■□□□ 1.47
LRRC42-202ENST00000371368 SF3B2Q13435 895 aaKnown RBP24.22■■□□□ 1.47
LRRC42-202ENST00000371368 AKAP12Q02952 1782 aa24.21■■□□□ 1.47
LRRC42-202ENST00000371368 LMO7Q8WWI1 1683 aa24.21■■□□□ 1.47
LRRC42-202ENST00000371368 KTN1Q86UP2 1357 aaKnown RBP24.2■■□□□ 1.46
LRRC42-202ENST00000371368 TTC21AQ8NDW8 1320 aa24.2■■□□□ 1.46
LRRC42-202ENST00000371368 ZBTB7CA1YPR0 619 aa24.2■■□□□ 1.46
LRRC42-202ENST00000371368 LARP1Q6PKG0 1096 aaKnown RBP24.2■■□□□ 1.46
LRRC42-202ENST00000371368 USP35Q9P2H5 1018 aa24.2■■□□□ 1.46
LRRC42-202ENST00000371368 PIK3C2AO00443 1686 aa24.2■■□□□ 1.46
LRRC42-202ENST00000371368 THSD7AQ9UPZ6 1657 aa24.2■■□□□ 1.46
LRRC42-202ENST00000371368 SLIT3O75094 1523 aa24.2■■□□□ 1.46
LRRC42-202ENST00000371368 DEFB132Q7Z7B7 95 aa24.19■■□□□ 1.46
LRRC42-202ENST00000371368 FAM182BQ5T319 152 aa24.18■■□□□ 1.46
LRRC42-202ENST00000371368 ZRANB1Q9UGI0 708 aa24.18■■□□□ 1.46
LRRC42-202ENST00000371368 BARGINQ6ZT62 677 aa24.17■■□□□ 1.46
LRRC42-202ENST00000371368 TMC1Q8TDI8 760 aa24.17■■□□□ 1.46
LRRC42-202ENST00000371368 AATKQ6ZMQ8 1374 aa24.16■■□□□ 1.46
LRRC42-202ENST00000371368 TCP11L2Q8N4U5 519 aa24.15■■□□□ 1.46
LRRC42-202ENST00000371368 COL5A2P05997 1499 aaPredicted RBP24.14■■□□□ 1.46
LRRC42-202ENST00000371368 ST20-MTHFSA0A0A6YYL1 179 aa24.14■■□□□ 1.45
LRRC42-202ENST00000371368 KCNH5Q8NCM2 988 aa24.14■■□□□ 1.45
LRRC42-202ENST00000371368 PUS7Q96PZ0 661 aaKnown RBP24.14■■□□□ 1.45
LRRC42-202ENST00000371368 SLC12A5Q9H2X9 1139 aa24.14■■□□□ 1.45
LRRC42-202ENST00000371368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.13■■□□□ 1.45
LRRC42-202ENST00000371368 THRAP3Q9Y2W1 955 aaKnown RBP24.13■■□□□ 1.45
LRRC42-202ENST00000371368 SOX12O15370 315 aa24.12■■□□□ 1.45
LRRC42-202ENST00000371368 HDGFL2Q7Z4V5 671 aaPredicted RBP24.12■■□□□ 1.45
LRRC42-202ENST00000371368 ARHGEF25Q86VW2 580 aa24.12■■□□□ 1.45
LRRC42-202ENST00000371368 TESK2Q96S53 571 aa24.12■■□□□ 1.45
LRRC42-202ENST00000371368 CD163L1Q9NR16 1453 aa24.12■■□□□ 1.45
LRRC42-202ENST00000371368 MON2Q7Z3U7 1717 aa24.11■■□□□ 1.45
LRRC42-202ENST00000371368 BAG6P46379 1132 aa24.11■■□□□ 1.45
LRRC42-202ENST00000371368 AXIN2Q9Y2T1 843 aa24.11■■□□□ 1.45
LRRC42-202ENST00000371368 PDE3BQ13370 1112 aa24.1■■□□□ 1.45
LRRC42-202ENST00000371368 COL18A1P39060 1754 aa24.1■■□□□ 1.45
LRRC42-202ENST00000371368 CRB1P82279 1406 aa24.1■■□□□ 1.45
LRRC42-202ENST00000371368 SLC24A1O60721 1099 aa24.09■■□□□ 1.45
LRRC42-202ENST00000371368 FAM196AQ6ZSG2 479 aa24.09■■□□□ 1.45
LRRC42-202ENST00000371368 PCGF6Q9BYE7 350 aa24.09■■□□□ 1.45
LRRC42-202ENST00000371368 TERF2IPQ9NYB0 399 aa24.09■■□□□ 1.45
LRRC42-202ENST00000371368 NME9Q86XW9 330 aa24.08■■□□□ 1.45
LRRC42-202ENST00000371368 USP31Q70CQ4 1352 aa24.07■■□□□ 1.44
LRRC42-202ENST00000371368 TOM1L2Q6ZVM7 507 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms