RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 HIRIP3Q9BW71 556 aaPredicted RBP21.89■■□□□ 1.09
SS18L1-202ENST00000370848 POLR3AO14802 1390 aaPredicted RBP21.87■■□□□ 1.09
SS18L1-202ENST00000370848 PHRF1Q9P1Y6 1649 aaKnown RBP21.87■■□□□ 1.09
SS18L1-202ENST00000370848 FAM83GA6ND36 823 aa21.86■■□□□ 1.09
SS18L1-202ENST00000370848 HAP1P54257 671 aaPredicted RBP21.85■■□□□ 1.09
SS18L1-202ENST00000370848 THSD7AQ9UPZ6 1657 aa21.84■■□□□ 1.09
SS18L1-202ENST00000370848 SEPT12Q8IYM1 358 aa21.83■■□□□ 1.09
SS18L1-202ENST00000370848 NUDT16Q96DE0 195 aaKnown RBP21.82■■□□□ 1.08
SS18L1-202ENST00000370848 LMOD2Q6P5Q4 547 aa21.81■■□□□ 1.08
SS18L1-202ENST00000370848 NBPF1Q3BBV0 1214 aa21.8■■□□□ 1.08
SS18L1-202ENST00000370848 PLEKHG3A1L390 1219 aa21.79■■□□□ 1.08
SS18L1-202ENST00000370848 NGDNQ8NEJ9 315 aaKnown RBP21.79■■□□□ 1.08
SS18L1-202ENST00000370848 BTG4Q9NY30 223 aa21.78■■□□□ 1.08
SS18L1-202ENST00000370848 NRKQ7Z2Y5 1582 aa21.78■■□□□ 1.08
SS18L1-202ENST00000370848 CDK19Q9BWU1 502 aa21.77■■□□□ 1.08
SS18L1-202ENST00000370848 ZRANB1Q9UGI0 708 aa21.77■■□□□ 1.08
SS18L1-202ENST00000370848 CCDC61Q9Y6R9 512 aa21.77■■□□□ 1.08
SS18L1-202ENST00000370848 SPATA31A5Q5VU36 1347 aa21.77■■□□□ 1.07
SS18L1-202ENST00000370848 SPATA31A7Q8IWB4 1347 aa21.77■■□□□ 1.07
SS18L1-202ENST00000370848 KRT27Q7Z3Y8 459 aa21.76■■□□□ 1.07
SS18L1-202ENST00000370848 LMO7Q8WWI1 1683 aa21.75■■□□□ 1.07
SS18L1-202ENST00000370848 BRD4O60885 1362 aaPredicted RBP21.75■■□□□ 1.07
SS18L1-202ENST00000370848 TONSLQ96HA7 1378 aa21.75■■□□□ 1.07
SS18L1-202ENST00000370848 NBPF8Q3BBV2 869 aa21.75■■□□□ 1.07
SS18L1-202ENST00000370848 QRICH2Q9H0J4 1663 aa21.75■■□□□ 1.07
SS18L1-202ENST00000370848 TRPM1Q7Z4N2 1603 aa21.73■■□□□ 1.07
SS18L1-202ENST00000370848 RGPD1P0DJD0 1748 aa21.73■■□□□ 1.07
SS18L1-202ENST00000370848 USP19O94966 1318 aa21.73■■□□□ 1.07
SS18L1-202ENST00000370848 ACEP12821 1306 aa21.73■■□□□ 1.07
SS18L1-202ENST00000370848 CPDO75976 1380 aa21.73■■□□□ 1.07
SS18L1-202ENST00000370848 KIAA0232Q92628 1395 aa21.73■■□□□ 1.07
SS18L1-202ENST00000370848 DISP2A7MBM2 1401 aa21.72■■□□□ 1.07
SS18L1-202ENST00000370848 CCDC9Q9Y3X0 531 aaKnown RBP21.71■■□□□ 1.07
SS18L1-202ENST00000370848 CENPJQ9HC77 1338 aaPredicted RBP21.71■■□□□ 1.07
SS18L1-202ENST00000370848 TNS1Q9HBL0 1735 aaKnown RBP21.7■■□□□ 1.06
SS18L1-202ENST00000370848 PAK3O75914 559 aaPredicted RBP21.7■■□□□ 1.06
SS18L1-202ENST00000370848 PRDM11Q9NQV5 511 aa21.7■■□□□ 1.06
SS18L1-202ENST00000370848 FAM98CQ17RN3 349 aaKnown RBP21.69■■□□□ 1.06
SS18L1-202ENST00000370848 SPATA31A1Q5TZJ5 1347 aa21.69■■□□□ 1.06
SS18L1-202ENST00000370848 PLEKHG5O94827 1062 aa21.68■■□□□ 1.06
SS18L1-202ENST00000370848 PPIP5K1Q6PFW1 1433 aa21.68■■□□□ 1.06
SS18L1-202ENST00000370848 LRP5O75197 1615 aa21.68■■□□□ 1.06
SS18L1-202ENST00000370848 DEFB132Q7Z7B7 95 aa21.67■■□□□ 1.06
SS18L1-202ENST00000370848 CAMTA1Q9Y6Y1 1673 aa21.66■■□□□ 1.06
SS18L1-202ENST00000370848 SSH2Q76I76 1423 aa21.66■■□□□ 1.06
SS18L1-202ENST00000370848 SLIT3O75094 1523 aa21.65■■□□□ 1.06
SS18L1-202ENST00000370848 ROCK2O75116 1388 aaKnown RBP21.65■■□□□ 1.06
SS18L1-202ENST00000370848 SF3B2Q13435 895 aaKnown RBP21.65■■□□□ 1.06
SS18L1-202ENST00000370848 USP6P35125 1406 aa21.64■■□□□ 1.06
SS18L1-202ENST00000370848 CCER1Q8TC90 406 aaPredicted RBP21.63■■□□□ 1.05
SS18L1-202ENST00000370848 BARGINQ6ZT62 677 aa21.62■■□□□ 1.05
SS18L1-202ENST00000370848 CLSPNQ9HAW4 1339 aa21.61■■□□□ 1.05
SS18L1-202ENST00000370848 PARP4Q9UKK3 1724 aaKnown RBP21.61■■□□□ 1.05
SS18L1-202ENST00000370848 PIK3C2AO00443 1686 aa21.61■■□□□ 1.05
SS18L1-202ENST00000370848 BAG6P46379 1132 aa21.61■■□□□ 1.05
SS18L1-202ENST00000370848 CHRNA2Q15822 529 aa21.6■■□□□ 1.05
SS18L1-202ENST00000370848 ABTB2Q8N961 1025 aa21.6■■□□□ 1.05
SS18L1-202ENST00000370848 COL5A2P05997 1499 aaPredicted RBP21.59■■□□□ 1.05
SS18L1-202ENST00000370848 AKAP12Q02952 1782 aa21.59■■□□□ 1.05
SS18L1-202ENST00000370848 ZC3H6P61129 1189 aaKnown RBP21.59■■□□□ 1.05
SS18L1-202ENST00000370848 SRPK2P78362 688 aaKnown RBP21.59■■□□□ 1.05
SS18L1-202ENST00000370848 NLRP13Q86W25 1043 aa21.59■■□□□ 1.05
SS18L1-202ENST00000370848 SBNO2Q9Y2G9 1366 aa21.59■■□□□ 1.05
SS18L1-202ENST00000370848 GCP02774 474 aa21.58■■□□□ 1.05
SS18L1-202ENST00000370848 CABP2Q9NPB3 220 aa21.58■■□□□ 1.05
SS18L1-202ENST00000370848 COL18A1P39060 1754 aa21.58■■□□□ 1.04
SS18L1-202ENST00000370848 A0A0G2JS52 829 aa21.57■■□□□ 1.04
SS18L1-202ENST00000370848 MYT1Q01538 1121 aa21.57■■□□□ 1.04
SS18L1-202ENST00000370848 NUTM2GQ5VZR2 741 aa21.56■■□□□ 1.04
SS18L1-202ENST00000370848 THRAP3Q9Y2W1 955 aaKnown RBP21.56■■□□□ 1.04
SS18L1-202ENST00000370848 RREB1Q92766 1687 aa21.56■■□□□ 1.04
SS18L1-202ENST00000370848 CARD11Q9BXL7 1154 aa21.55■■□□□ 1.04
SS18L1-202ENST00000370848 AATKQ6ZMQ8 1374 aa21.55■■□□□ 1.04
SS18L1-202ENST00000370848 PARD3Q8TEW0 1356 aa21.55■■□□□ 1.04
SS18L1-202ENST00000370848 EVC2Q86UK5 1308 aa21.55■■□□□ 1.04
SS18L1-202ENST00000370848 USP54Q70EL1 1684 aa21.54■■□□□ 1.04
SS18L1-202ENST00000370848 CABP1Q9NZU7 370 aa21.54■■□□□ 1.04
SS18L1-202ENST00000370848 CPSF1Q10570 1443 aaKnown RBP21.54■■□□□ 1.04
SS18L1-202ENST00000370848 PEAK1Q9H792 1746 aa21.53■■□□□ 1.04
SS18L1-202ENST00000370848 FAM196AQ6ZSG2 479 aa21.53■■□□□ 1.04
SS18L1-202ENST00000370848 STRN4Q9NRL3 753 aa21.53■■□□□ 1.04
SS18L1-202ENST00000370848 ABCC6O95255 1503 aa21.53■■□□□ 1.04
SS18L1-202ENST00000370848 CRB1P82279 1406 aa21.53■■□□□ 1.04
SS18L1-202ENST00000370848 WNK3Q9BYP7 1800 aa21.52■■□□□ 1.04
SS18L1-202ENST00000370848 LARP1Q6PKG0 1096 aaKnown RBP21.52■■□□□ 1.04
SS18L1-202ENST00000370848 TCP11L2Q8N4U5 519 aa21.52■■□□□ 1.04
SS18L1-202ENST00000370848 MON2Q7Z3U7 1717 aa21.52■■□□□ 1.03
SS18L1-202ENST00000370848 FAM182BQ5T319 152 aa21.51■■□□□ 1.03
SS18L1-202ENST00000370848 EN1Q05925 392 aaPredicted RBP21.5■■□□□ 1.03
SS18L1-202ENST00000370848 RGPD3A6NKT7 1758 aaPredicted RBP21.5■■□□□ 1.03
SS18L1-202ENST00000370848 RGPD4Q7Z3J3 1758 aa21.5■■□□□ 1.03
SS18L1-202ENST00000370848 LRRC37A3O60309 1634 aa21.5■■□□□ 1.03
SS18L1-202ENST00000370848 CAMKK2Q96RR4 588 aa21.49■■□□□ 1.03
SS18L1-202ENST00000370848 ZNF692Q9BU19 519 aaPredicted RBP21.49■■□□□ 1.03
SS18L1-202ENST00000370848 EVA1CP58658 441 aa21.48■■□□□ 1.03
SS18L1-202ENST00000370848 NUP188Q5SRE5 1749 aa21.48■■□□□ 1.03
SS18L1-202ENST00000370848 NFAT5O94916 1531 aa21.48■■□□□ 1.03
SS18L1-202ENST00000370848 C11orf95C9JLR9 678 aaPredicted RBP21.47■■□□□ 1.03
SS18L1-202ENST00000370848 TIMELESSQ9UNS1 1208 aa21.47■■□□□ 1.03
SS18L1-202ENST00000370848 TTC21AQ8NDW8 1320 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms