RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 PPIP5K1Q6PFW1 1433 aa16.72■□□□□ 0.27
GPC3-201ENST00000370818 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
GPC3-201ENST00000370818 U2AF1L5P0DN76 240 aaPredicted RBP16.71■□□□□ 0.27
GPC3-201ENST00000370818 U2AF1Q01081 240 aaKnown RBP eCLIP16.71■□□□□ 0.274e-9■□□□□ 8.2
GPC3-201ENST00000370818 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.71■□□□□ 0.272e-7■■□□□ 12.6
GPC3-201ENST00000370818 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
GPC3-201ENST00000370818 ARHGAP23Q9P227 1491 aa16.71■□□□□ 0.27
GPC3-201ENST00000370818 FER1L4A9Z1Z3 1794 aa16.71■□□□□ 0.27
GPC3-201ENST00000370818 SLIT1O75093 1534 aa16.71■□□□□ 0.27
GPC3-201ENST00000370818 ANP32AP39687 249 aaKnown RBP16.71■□□□□ 0.26
GPC3-201ENST00000370818 C20orf194Q5TEA3 1177 aa16.71■□□□□ 0.26
GPC3-201ENST00000370818 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.26
GPC3-201ENST00000370818 NCKAP5LQ9HCH0 1330 aa16.7■□□□□ 0.26
GPC3-201ENST00000370818 NEUROD2Q15784 382 aa16.7■□□□□ 0.26
GPC3-201ENST00000370818 CCDC61Q9Y6R9 512 aa16.7■□□□□ 0.26
GPC3-201ENST00000370818 KIF20BQ96Q89 1820 aa16.69■□□□□ 0.26
GPC3-201ENST00000370818 PNPLA6Q8IY17 1366 aa16.69■□□□□ 0.26
GPC3-201ENST00000370818 SLC26A8Q96RN1 970 aa16.69■□□□□ 0.26
GPC3-201ENST00000370818 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
GPC3-201ENST00000370818 EID1Q9Y6B2 187 aa16.69■□□□□ 0.26
GPC3-201ENST00000370818 PRR36Q9H6K5 1346 aa16.69■□□□□ 0.26
GPC3-201ENST00000370818 PTPRUQ92729 1446 aa16.68■□□□□ 0.26
GPC3-201ENST00000370818 EDC4Q6P2E9 1401 aaKnown RBP16.68■□□□□ 0.26
GPC3-201ENST00000370818 CCDC27Q2M243 656 aa16.68■□□□□ 0.26
GPC3-201ENST00000370818 ADGRB2O60241 1585 aa16.67■□□□□ 0.26
GPC3-201ENST00000370818 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
GPC3-201ENST00000370818 CDC42BPGQ6DT37 1551 aa16.67■□□□□ 0.26
GPC3-201ENST00000370818 PLEKHF1Q96S99 279 aa16.67■□□□□ 0.26
GPC3-201ENST00000370818 FBLN1P23142 703 aa16.66■□□□□ 0.26
GPC3-201ENST00000370818 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
GPC3-201ENST00000370818 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.66■□□□□ 0.26
GPC3-201ENST00000370818 WDR63Q8IWG1 891 aa16.65■□□□□ 0.26
GPC3-201ENST00000370818 POLKQ9UBT6 870 aa16.65■□□□□ 0.26
GPC3-201ENST00000370818 NME9Q86XW9 330 aa16.65■□□□□ 0.26
GPC3-201ENST00000370818 THEMISQ8N1K5 641 aaPredicted RBP16.65■□□□□ 0.26
GPC3-201ENST00000370818 TBX22Q9Y458 520 aa16.64■□□□□ 0.25
GPC3-201ENST00000370818 DIAPH1O60610 1272 aaKnown RBP16.64■□□□□ 0.25
GPC3-201ENST00000370818 BCAR3O75815 825 aa16.64■□□□□ 0.25
GPC3-201ENST00000370818 ZRANB1Q9UGI0 708 aa16.63■□□□□ 0.25
GPC3-201ENST00000370818 MON2Q7Z3U7 1717 aa16.62■□□□□ 0.25
GPC3-201ENST00000370818 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.62■□□□□ 0.25
GPC3-201ENST00000370818 AMOTL2Q9Y2J4 779 aa16.62■□□□□ 0.25
GPC3-201ENST00000370818 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
GPC3-201ENST00000370818 TMPOP42166 694 aaKnown RBP16.6■□□□□ 0.25
GPC3-201ENST00000370818 EMILIN1Q9Y6C2 1016 aa16.6■□□□□ 0.25
GPC3-201ENST00000370818 AKAP12Q02952 1782 aa16.6■□□□□ 0.25
GPC3-201ENST00000370818 AATKQ6ZMQ8 1374 aa16.59■□□□□ 0.25
GPC3-201ENST00000370818 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
GPC3-201ENST00000370818 USP35Q9P2H5 1018 aa16.59■□□□□ 0.25
GPC3-201ENST00000370818 PTCH1Q13635 1447 aa16.59■□□□□ 0.25
GPC3-201ENST00000370818 NUTM2FA1L443 756 aa16.58■□□□□ 0.25
GPC3-201ENST00000370818 TRIM35Q9UPQ4 493 aa16.58■□□□□ 0.25
GPC3-201ENST00000370818 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.24
GPC3-201ENST00000370818 COG3Q96JB2 828 aa16.58■□□□□ 0.24
GPC3-201ENST00000370818 TOPAZ1Q8N9V7 1692 aa16.58■□□□□ 0.24
GPC3-201ENST00000370818 ACEP12821 1306 aa16.57■□□□□ 0.24
GPC3-201ENST00000370818 MAPK8IP3Q9UPT6 1336 aa16.57■□□□□ 0.24
GPC3-201ENST00000370818 DIP2AQ14689 1571 aa16.57■□□□□ 0.24
GPC3-201ENST00000370818 ITSN1Q15811 1721 aa16.57■□□□□ 0.24
GPC3-201ENST00000370818 CEP170BQ9Y4F5 1589 aaPredicted RBP16.57■□□□□ 0.24
GPC3-201ENST00000370818 FCHSD2O94868 740 aa16.56■□□□□ 0.24
GPC3-201ENST00000370818 MAP2P11137 1827 aaKnown RBP16.56■□□□□ 0.24
GPC3-201ENST00000370818 RARSP54136 660 aaKnown RBP16.56■□□□□ 0.24
GPC3-201ENST00000370818 CDK12Q9NYV4 1490 aaPredicted RBP16.56■□□□□ 0.24
GPC3-201ENST00000370818 NEFMP07197 916 aa16.55■□□□□ 0.24
GPC3-201ENST00000370818 RSPH6AQ9H0K4 717 aa16.55■□□□□ 0.24
GPC3-201ENST00000370818 MYH16Q9H6N6 1097 aa16.55■□□□□ 0.24
GPC3-201ENST00000370818 TTC21BQ7Z4L5 1316 aa16.55■□□□□ 0.24
GPC3-201ENST00000370818 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
GPC3-201ENST00000370818 NRKQ7Z2Y5 1582 aa16.55■□□□□ 0.24
GPC3-201ENST00000370818 IL13P35225 146 aa16.54■□□□□ 0.24
GPC3-201ENST00000370818 RRS1Q15050 365 aaKnown RBP16.54■□□□□ 0.24
GPC3-201ENST00000370818 PNNQ9H307 717 aaKnown RBP16.54■□□□□ 0.24
GPC3-201ENST00000370818 RIMS1Q86UR5 1692 aaKnown RBP16.54■□□□□ 0.24
GPC3-201ENST00000370818 USP6P35125 1406 aa16.54■□□□□ 0.24
GPC3-201ENST00000370818 KDM2BQ8NHM5 1336 aa16.54■□□□□ 0.24
GPC3-201ENST00000370818 RIPK4P57078 832 aa16.53■□□□□ 0.24
GPC3-201ENST00000370818 XRN1Q8IZH2 1706 aaKnown RBP16.53■□□□□ 0.24
GPC3-201ENST00000370818 PRKAR2BP31323 418 aa16.53■□□□□ 0.24
GPC3-201ENST00000370818 PDE3AQ14432 1141 aa16.52■□□□□ 0.23
GPC3-201ENST00000370818 TSR2Q969E8 191 aaKnown RBP16.52■□□□□ 0.23
GPC3-201ENST00000370818 OVOS2A0A0J9YW53 1432 aa16.52■□□□□ 0.23
GPC3-201ENST00000370818 OVOS2Q6IE36 1432 aa16.52■□□□□ 0.23
GPC3-201ENST00000370818 SSH2Q76I76 1423 aa16.52■□□□□ 0.23
GPC3-201ENST00000370818 KCNA6P17658 529 aa16.51■□□□□ 0.23
GPC3-201ENST00000370818 EIF5BO60841 1220 aaKnown RBP16.51■□□□□ 0.23
GPC3-201ENST00000370818 HMOX1P09601 288 aa16.51■□□□□ 0.23
GPC3-201ENST00000370818 BRPF3Q9ULD4 1205 aa16.51■□□□□ 0.23
GPC3-201ENST00000370818 IL16Q14005 1332 aa16.5■□□□□ 0.23
GPC3-201ENST00000370818 PHACTR3Q96KR7 559 aa16.5■□□□□ 0.23
GPC3-201ENST00000370818 LAS1LQ9Y4W2 734 aaKnown RBP16.5■□□□□ 0.23
GPC3-201ENST00000370818 PIK3R4Q99570 1358 aa16.5■□□□□ 0.23
GPC3-201ENST00000370818 TCERG1O14776 1098 aaKnown RBP16.49■□□□□ 0.23
GPC3-201ENST00000370818 PMFBP1Q8TBY8 1022 aa16.49■□□□□ 0.23
GPC3-201ENST00000370818 PANK1Q8TE04 598 aa16.49■□□□□ 0.23
GPC3-201ENST00000370818 BCL2L13Q9BXK5 485 aa16.49■□□□□ 0.23
GPC3-201ENST00000370818 FRAT1Q92837 279 aaPredicted RBP16.48■□□□□ 0.23
GPC3-201ENST00000370818 ADAMTSL3P82987 1691 aa16.48■□□□□ 0.23
GPC3-201ENST00000370818 CANXP27824 592 aaKnown RBP16.47■□□□□ 0.23
GPC3-201ENST00000370818 CENPQQ7L2Z9 268 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms