RNA–Protein interactions for RNA: ENST00000370275.8

ARFGAP1-202, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARFGAP1, Length 3,467 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-202ENST00000370275 THUMPD2Q9BTF0 503 aaKnown RBP18.41■□□□□ 0.54
ARFGAP1-202ENST00000370275 CAMSAP1Q5T5Y3 1602 aa18.41■□□□□ 0.54
ARFGAP1-202ENST00000370275 C22orf23Q9BZE7 217 aa18.4■□□□□ 0.54
ARFGAP1-202ENST00000370275 ARHGEF28Q8N1W1 1705 aaKnown RBP18.4■□□□□ 0.54
ARFGAP1-202ENST00000370275 LNPKQ9C0E8 428 aa18.39■□□□□ 0.53
ARFGAP1-202ENST00000370275 ELL2O00472 640 aaPredicted RBP18.38■□□□□ 0.53
ARFGAP1-202ENST00000370275 AAMPQ13685 434 aa18.38■□□□□ 0.53
ARFGAP1-202ENST00000370275 C1orf115Q9H7X2 142 aa18.38■□□□□ 0.53
ARFGAP1-202ENST00000370275 HMOX1P09601 288 aa18.37■□□□□ 0.53
ARFGAP1-202ENST00000370275 CABP1Q9NZU7 370 aa18.37■□□□□ 0.53
ARFGAP1-202ENST00000370275 DDX19BQ9UMR2 479 aa18.37■□□□□ 0.53
ARFGAP1-202ENST00000370275 ABCC11Q96J66 1382 aa18.37■□□□□ 0.53
ARFGAP1-202ENST00000370275 DIAPH1O60610 1272 aaKnown RBP18.37■□□□□ 0.53
ARFGAP1-202ENST00000370275 USP32Q8NFA0 1604 aa18.37■□□□□ 0.53
ARFGAP1-202ENST00000370275 HECW2Q9P2P5 1572 aa18.36■□□□□ 0.53
ARFGAP1-202ENST00000370275 NEXMIFQ5QGS0 1516 aa18.36■□□□□ 0.53
ARFGAP1-202ENST00000370275 NSD2O96028 1365 aa18.36■□□□□ 0.53
ARFGAP1-202ENST00000370275 FBXO31Q5XUX0 539 aaPredicted RBP18.36■□□□□ 0.53
ARFGAP1-202ENST00000370275 PRKCSHP14314 528 aaPredicted RBP18.36■□□□□ 0.53
ARFGAP1-202ENST00000370275 ADGRB2O60241 1585 aa18.35■□□□□ 0.53
ARFGAP1-202ENST00000370275 TERF2IPQ9NYB0 399 aa18.35■□□□□ 0.53
ARFGAP1-202ENST00000370275 PRKAR2BP31323 418 aa18.34■□□□□ 0.53
ARFGAP1-202ENST00000370275 CDK19Q9BWU1 502 aa18.34■□□□□ 0.53
ARFGAP1-202ENST00000370275 MLH3Q9UHC1 1453 aa18.33■□□□□ 0.53
ARFGAP1-202ENST00000370275 ZBTB40Q9NUA8 1239 aa18.33■□□□□ 0.53
ARFGAP1-202ENST00000370275 HDAC1Q13547 482 aaPredicted RBP18.33■□□□□ 0.52
ARFGAP1-202ENST00000370275 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.52
ARFGAP1-202ENST00000370275 WAPLQ7Z5K2 1190 aa18.32■□□□□ 0.52
ARFGAP1-202ENST00000370275 PHACTR3Q96KR7 559 aa18.32■□□□□ 0.52
ARFGAP1-202ENST00000370275 COL3A1P02461 1466 aaPredicted RBP18.32■□□□□ 0.52
ARFGAP1-202ENST00000370275 SMC5Q8IY18 1101 aa18.31■□□□□ 0.52
ARFGAP1-202ENST00000370275 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
ARFGAP1-202ENST00000370275 TSPYL6Q8N831 410 aa18.31■□□□□ 0.52
ARFGAP1-202ENST00000370275 MYO5BQ9ULV0 1848 aa18.3■□□□□ 0.52
ARFGAP1-202ENST00000370275 MCM4P33991 863 aa18.3■□□□□ 0.52
ARFGAP1-202ENST00000370275 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
ARFGAP1-202ENST00000370275 PUS7Q96PZ0 661 aaKnown RBP18.3■□□□□ 0.52
ARFGAP1-202ENST00000370275 CT47B1P0C2W7 299 aaPredicted RBP18.3■□□□□ 0.52
ARFGAP1-202ENST00000370275 STAG3Q9UJ98 1225 aa18.3■□□□□ 0.52
ARFGAP1-202ENST00000370275 CD163L1Q9NR16 1453 aa18.29■□□□□ 0.52
ARFGAP1-202ENST00000370275 PANK2Q9BZ23 570 aa18.29■□□□□ 0.52
ARFGAP1-202ENST00000370275 ZRANB1Q9UGI0 708 aa18.29■□□□□ 0.52
ARFGAP1-202ENST00000370275 ANKRD45Q5TZF3 282 aa18.29■□□□□ 0.52
ARFGAP1-202ENST00000370275 PIK3C2BO00750 1634 aa18.29■□□□□ 0.52
ARFGAP1-202ENST00000370275 YEATS2Q9ULM3 1422 aa18.28■□□□□ 0.52
ARFGAP1-202ENST00000370275 EMILIN1Q9Y6C2 1016 aa18.28■□□□□ 0.52
ARFGAP1-202ENST00000370275 HSCBQ8IWL3 235 aa18.28■□□□□ 0.52
ARFGAP1-202ENST00000370275 IPO8O15397 1037 aaKnown RBP18.27■□□□□ 0.52
ARFGAP1-202ENST00000370275 PTPRMP28827 1452 aa18.27■□□□□ 0.52
ARFGAP1-202ENST00000370275 KIF16BQ96L93 1317 aa18.27■□□□□ 0.51
ARFGAP1-202ENST00000370275 POLKQ9UBT6 870 aa18.26■□□□□ 0.51
ARFGAP1-202ENST00000370275 ATAD2Q6PL18 1390 aa18.26■□□□□ 0.51
ARFGAP1-202ENST00000370275 YTHDC2Q9H6S0 1430 aaKnown RBP18.26■□□□□ 0.51
ARFGAP1-202ENST00000370275 NUCB1Q02818 461 aa18.26■□□□□ 0.51
ARFGAP1-202ENST00000370275 CHD1LQ86WJ1 897 aa18.26■□□□□ 0.51
ARFGAP1-202ENST00000370275 CHMP5Q9NZZ3 219 aa18.26■□□□□ 0.51
ARFGAP1-202ENST00000370275 RSPH6AQ9H0K4 717 aa18.26■□□□□ 0.51
ARFGAP1-202ENST00000370275 RRAGDQ9NQL2 400 aaPredicted RBP18.25■□□□□ 0.51
ARFGAP1-202ENST00000370275 ZMYM3Q14202 1370 aa18.25■□□□□ 0.51
ARFGAP1-202ENST00000370275 XRCC6P12956 609 aaKnown RBP eCLIP18.25■□□□□ 0.515e-6■■□□□ 11.5
ARFGAP1-202ENST00000370275 NCKAP5LQ9HCH0 1330 aa18.25■□□□□ 0.51
ARFGAP1-202ENST00000370275 IL16Q14005 1332 aa18.24■□□□□ 0.51
ARFGAP1-202ENST00000370275 SLC52A1Q9NWF4 448 aa18.24■□□□□ 0.51
ARFGAP1-202ENST00000370275 TRAK2O60296 914 aa18.24■□□□□ 0.51
ARFGAP1-202ENST00000370275 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
ARFGAP1-202ENST00000370275 FAM83GA6ND36 823 aa18.24■□□□□ 0.51
ARFGAP1-202ENST00000370275 DCTN1Q14203 1278 aa18.24■□□□□ 0.51
ARFGAP1-202ENST00000370275 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
ARFGAP1-202ENST00000370275 FAM43AQ8N2R8 423 aa18.23■□□□□ 0.51
ARFGAP1-202ENST00000370275 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
ARFGAP1-202ENST00000370275 GOLGA6L3A6NEY3 463 aa18.23■□□□□ 0.51
ARFGAP1-202ENST00000370275 FCHSD2O94868 740 aa18.23■□□□□ 0.51
ARFGAP1-202ENST00000370275 NME9Q86XW9 330 aa18.22■□□□□ 0.51
ARFGAP1-202ENST00000370275 DIP2CQ9Y2E4 1556 aa18.22■□□□□ 0.51
ARFGAP1-202ENST00000370275 CD2BP2O95400 341 aaKnown RBP18.22■□□□□ 0.51
ARFGAP1-202ENST00000370275 VAMP4O75379 141 aa18.22■□□□□ 0.51
ARFGAP1-202ENST00000370275 RRS1Q15050 365 aaKnown RBP18.21■□□□□ 0.51
ARFGAP1-202ENST00000370275 L1TD1Q5T7N2 865 aaKnown RBP18.21■□□□□ 0.51
ARFGAP1-202ENST00000370275 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
ARFGAP1-202ENST00000370275 PPIP5K1Q6PFW1 1433 aa18.21■□□□□ 0.51
ARFGAP1-202ENST00000370275 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
ARFGAP1-202ENST00000370275 HSP90AB1P08238 724 aaKnown RBP18.2■□□□□ 0.5
ARFGAP1-202ENST00000370275 SIRT2Q8IXJ6 389 aa18.2■□□□□ 0.5
ARFGAP1-202ENST00000370275 ZNF692Q9BU19 519 aaPredicted RBP18.2■□□□□ 0.5
ARFGAP1-202ENST00000370275 MBIPQ9NS73 344 aa18.2■□□□□ 0.5
ARFGAP1-202ENST00000370275 MLECQ14165 292 aa18.2■□□□□ 0.5
ARFGAP1-202ENST00000370275 ALDH1L2Q3SY69 923 aa18.2■□□□□ 0.5
ARFGAP1-202ENST00000370275 MRPL50Q8N5N7 158 aaKnown RBP18.2■□□□□ 0.5
ARFGAP1-202ENST00000370275 NFE2L2Q16236 605 aa18.19■□□□□ 0.5
ARFGAP1-202ENST00000370275 PNPLA6Q8IY17 1366 aa18.19■□□□□ 0.5
ARFGAP1-202ENST00000370275 C8orf58Q8NAV2 365 aa18.19■□□□□ 0.5
ARFGAP1-202ENST00000370275 PNNQ9H307 717 aaKnown RBP18.19■□□□□ 0.5
ARFGAP1-202ENST00000370275 CFAP74Q9C0B2 1584 aa18.19■□□□□ 0.5
ARFGAP1-202ENST00000370275 HSP90AA1P07900 732 aaKnown RBP18.18■□□□□ 0.5
ARFGAP1-202ENST00000370275 APBB1O00213 710 aa18.17■□□□□ 0.5
ARFGAP1-202ENST00000370275 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
ARFGAP1-202ENST00000370275 TBC1D9Q6ZT07 1266 aa18.17■□□□□ 0.5
ARFGAP1-202ENST00000370275 FAM135BQ49AJ0 1406 aa18.17■□□□□ 0.5
ARFGAP1-202ENST00000370275 RBM25P49756 843 aaKnown RBP18.16■□□□□ 0.5
ARFGAP1-202ENST00000370275 TWISTNBQ3B726 338 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms