RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 COL22A1Q8NFW1 1626 aaPredicted RBP19.08■□□□□ 0.65
SSR4-202ENST00000370085 MEX3CQ5U5Q3 659 aaKnown RBP19.08■□□□□ 0.64
SSR4-202ENST00000370085 CPSF1Q10570 1443 aaKnown RBP19.08■□□□□ 0.64
SSR4-202ENST00000370085 NUTM2BA6NNL0 878 aaPredicted RBP19.07■□□□□ 0.64
SSR4-202ENST00000370085 NUTM2EB1AL46 878 aaPredicted RBP19.07■□□□□ 0.64
SSR4-202ENST00000370085 NUTM2AQ8IVF1 878 aaPredicted RBP19.07■□□□□ 0.64
SSR4-202ENST00000370085 ALS2Q96Q42 1657 aa19.06■□□□□ 0.64
SSR4-202ENST00000370085 ABTB2Q8N961 1025 aa19.06■□□□□ 0.64
SSR4-202ENST00000370085 ANKRD36BQ8N2N9 1353 aa19.06■□□□□ 0.64
SSR4-202ENST00000370085 TTC21AQ8NDW8 1320 aa19.05■□□□□ 0.64
SSR4-202ENST00000370085 MON2Q7Z3U7 1717 aa19.05■□□□□ 0.64
SSR4-202ENST00000370085 EDC4Q6P2E9 1401 aaKnown RBP19.04■□□□□ 0.64
SSR4-202ENST00000370085 A0A1W2PP64 1363 aa19.04■□□□□ 0.64
SSR4-202ENST00000370085 MED1Q15648 1581 aaPredicted RBP19.03■□□□□ 0.64
SSR4-202ENST00000370085 NLRP13Q86W25 1043 aa19.03■□□□□ 0.64
SSR4-202ENST00000370085 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
SSR4-202ENST00000370085 TTC21BQ7Z4L5 1316 aa19.02■□□□□ 0.64
SSR4-202ENST00000370085 CD163L1Q9NR16 1453 aa19.02■□□□□ 0.63
SSR4-202ENST00000370085 NLRP6P59044 892 aa19■□□□□ 0.63
SSR4-202ENST00000370085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19■□□□□ 0.63
SSR4-202ENST00000370085 MYOM1P52179 1685 aa19■□□□□ 0.63
SSR4-202ENST00000370085 SSH2Q76I76 1423 aa19■□□□□ 0.63
SSR4-202ENST00000370085 NRKQ7Z2Y5 1582 aa18.99■□□□□ 0.63
SSR4-202ENST00000370085 PLEKHG5O94827 1062 aa18.99■□□□□ 0.63
SSR4-202ENST00000370085 ADAMTS2O95450 1211 aa18.99■□□□□ 0.63
SSR4-202ENST00000370085 NUTM2GQ5VZR2 741 aa18.98■□□□□ 0.63
SSR4-202ENST00000370085 LRP6O75581 1613 aa18.98■□□□□ 0.63
SSR4-202ENST00000370085 KIF7Q2M1P5 1343 aa18.98■□□□□ 0.63
SSR4-202ENST00000370085 CABLES1Q8TDN4 633 aa18.97■□□□□ 0.63
SSR4-202ENST00000370085 C11orf95C9JLR9 678 aaPredicted RBP18.96■□□□□ 0.63
SSR4-202ENST00000370085 C8orf37Q96NL8 207 aa18.96■□□□□ 0.63
SSR4-202ENST00000370085 ABCA3Q99758 1704 aa18.96■□□□□ 0.63
SSR4-202ENST00000370085 MARF1Q9Y4F3 1742 aaKnown RBP18.96■□□□□ 0.63
SSR4-202ENST00000370085 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
SSR4-202ENST00000370085 KCNH5Q8NCM2 988 aa18.95■□□□□ 0.62
SSR4-202ENST00000370085 NGLY1Q96IV0 654 aa18.95■□□□□ 0.62
SSR4-202ENST00000370085 CCDC7Q96M83 1385 aa18.94■□□□□ 0.62
SSR4-202ENST00000370085 USP19O94966 1318 aa18.94■□□□□ 0.62
SSR4-202ENST00000370085 PHRF1Q9P1Y6 1649 aaKnown RBP18.93■□□□□ 0.62
SSR4-202ENST00000370085 ZNF772Q68DY9 489 aaPredicted RBP18.93■□□□□ 0.62
SSR4-202ENST00000370085 CGNL1Q0VF96 1302 aa18.93■□□□□ 0.62
SSR4-202ENST00000370085 USP31Q70CQ4 1352 aa18.93■□□□□ 0.62
SSR4-202ENST00000370085 NSD3Q9BZ95 1437 aa18.92■□□□□ 0.62
SSR4-202ENST00000370085 CRYBG1Q9Y4K1 1723 aa18.92■□□□□ 0.62
SSR4-202ENST00000370085 GCP02774 474 aa18.92■□□□□ 0.62
SSR4-202ENST00000370085 COG3Q96JB2 828 aa18.92■□□□□ 0.62
SSR4-202ENST00000370085 PANK3Q9H999 370 aa18.92■□□□□ 0.62
SSR4-202ENST00000370085 NME9Q86XW9 330 aa18.91■□□□□ 0.62
SSR4-202ENST00000370085 PRDM11Q9NQV5 511 aa18.91■□□□□ 0.62
SSR4-202ENST00000370085 WASHC2AQ641Q2 1341 aa18.91■□□□□ 0.62
SSR4-202ENST00000370085 KNSTRNQ9Y448 316 aa18.9■□□□□ 0.62
SSR4-202ENST00000370085 AFF2P51816 1311 aa18.9■□□□□ 0.62
SSR4-202ENST00000370085 USP54Q70EL1 1684 aa18.89■□□□□ 0.61
SSR4-202ENST00000370085 KIF20BQ96Q89 1820 aa18.89■□□□□ 0.61
SSR4-202ENST00000370085 SLIT3O75094 1523 aa18.89■□□□□ 0.61
SSR4-202ENST00000370085 ZC3H6P61129 1189 aaKnown RBP18.88■□□□□ 0.61
SSR4-202ENST00000370085 CARD14Q9BXL6 1004 aa18.88■□□□□ 0.61
SSR4-202ENST00000370085 COL14A1Q05707 1796 aaKnown RBP18.88■□□□□ 0.61
SSR4-202ENST00000370085 CPDO75976 1380 aa18.87■□□□□ 0.61
SSR4-202ENST00000370085 FNBP4Q8N3X1 1017 aaPredicted RBP18.87■□□□□ 0.61
SSR4-202ENST00000370085 KIAA0232Q92628 1395 aa18.87■□□□□ 0.61
SSR4-202ENST00000370085 USP21Q9UK80 565 aa18.87■□□□□ 0.61
SSR4-202ENST00000370085 OVOS2A0A0J9YW53 1432 aa18.86■□□□□ 0.61
SSR4-202ENST00000370085 OVOS2Q6IE36 1432 aa18.86■□□□□ 0.61
SSR4-202ENST00000370085 FYB1O15117 783 aa18.86■□□□□ 0.61
SSR4-202ENST00000370085 NWD2Q9ULI1 1742 aa18.86■□□□□ 0.61
SSR4-202ENST00000370085 SOX12O15370 315 aa18.85■□□□□ 0.61
SSR4-202ENST00000370085 GGNBP2Q9H3C7 697 aa18.85■□□□□ 0.61
SSR4-202ENST00000370085 NSD2O96028 1365 aa18.84■□□□□ 0.61
SSR4-202ENST00000370085 ZBTB7CA1YPR0 619 aa18.84■□□□□ 0.61
SSR4-202ENST00000370085 FAM83GA6ND36 823 aa18.84■□□□□ 0.61
SSR4-202ENST00000370085 ZRANB1Q9UGI0 708 aa18.84■□□□□ 0.61
SSR4-202ENST00000370085 PLCH1Q4KWH8 1693 aa18.83■□□□□ 0.61
SSR4-202ENST00000370085 UNC5CLQ8IV45 518 aa18.83■□□□□ 0.6
SSR4-202ENST00000370085 TRPC5Q9UL62 973 aaPredicted RBP18.83■□□□□ 0.6
SSR4-202ENST00000370085 BTG4Q9NY30 223 aa18.82■□□□□ 0.6
SSR4-202ENST00000370085 SLIT2O94813 1529 aa18.82■□□□□ 0.6
SSR4-202ENST00000370085 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.81■□□□□ 0.6
SSR4-202ENST00000370085 CHRNA2Q15822 529 aa18.81■□□□□ 0.6
SSR4-202ENST00000370085 QTRT2Q9H974 415 aaKnown RBP18.81■□□□□ 0.6
SSR4-202ENST00000370085 AATKQ6ZMQ8 1374 aa18.81■□□□□ 0.6
SSR4-202ENST00000370085 NFAT5O94916 1531 aa18.8■□□□□ 0.6
SSR4-202ENST00000370085 EVA1CP58658 441 aa18.8■□□□□ 0.6
SSR4-202ENST00000370085 ARHGEF25Q86VW2 580 aa18.8■□□□□ 0.6
SSR4-202ENST00000370085 RGS17Q9UGC6 210 aaPredicted RBP18.79■□□□□ 0.6
SSR4-202ENST00000370085 ANKRD26Q9UPS8 1709 aa18.79■□□□□ 0.6
SSR4-202ENST00000370085 ABCC6O95255 1503 aa18.79■□□□□ 0.6
SSR4-202ENST00000370085 BCL9LQ86UU0 1499 aa18.78■□□□□ 0.6
SSR4-202ENST00000370085 CCDC9Q9Y3X0 531 aaKnown RBP18.78■□□□□ 0.6
SSR4-202ENST00000370085 LTN1O94822 1766 aa18.78■□□□□ 0.6
SSR4-202ENST00000370085 RXRBP28702 533 aa18.77■□□□□ 0.6
SSR4-202ENST00000370085 MORC1Q86VD1 984 aa18.77■□□□□ 0.6
SSR4-202ENST00000370085 AMPHP49418 695 aa18.76■□□□□ 0.59
SSR4-202ENST00000370085 RBM6P78332 1123 aaKnown RBP18.76■□□□□ 0.59
SSR4-202ENST00000370085 VPS72Q15906 364 aa18.76■□□□□ 0.59
SSR4-202ENST00000370085 ATRNO75882 1429 aa18.75■□□□□ 0.59
SSR4-202ENST00000370085 PER1O15534 1290 aaPredicted RBP18.75■□□□□ 0.59
SSR4-202ENST00000370085 STRN4Q9NRL3 753 aa18.75■□□□□ 0.59
SSR4-202ENST00000370085 LMO7Q8WWI1 1683 aa18.75■□□□□ 0.59
SSR4-202ENST00000370085 POTEAQ6S8J7 498 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms