RNA–Protein interactions for RNA: ENST00000369802.7

CSF1-204, Transcript of colony stimulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-204ENST00000369802 C20orf194Q5TEA3 1177 aa22.41■■□□□ 1.18
CSF1-204ENST00000369802 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.41■■□□□ 1.18
CSF1-204ENST00000369802 NUDT16Q96DE0 195 aaKnown RBP22.41■■□□□ 1.18
CSF1-204ENST00000369802 CCDC27Q2M243 656 aa22.4■■□□□ 1.18
CSF1-204ENST00000369802 NCBP3Q53F19 620 aaKnown RBP22.4■■□□□ 1.18
CSF1-204ENST00000369802 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.4■■□□□ 1.18
CSF1-204ENST00000369802 PNPLA6Q8IY17 1366 aa22.39■■□□□ 1.18
CSF1-204ENST00000369802 EID1Q9Y6B2 187 aa22.38■■□□□ 1.17
CSF1-204ENST00000369802 WDR63Q8IWG1 891 aa22.38■■□□□ 1.17
CSF1-204ENST00000369802 CCDC61Q9Y6R9 512 aa22.38■■□□□ 1.17
CSF1-204ENST00000369802 TOPAZ1Q8N9V7 1692 aa22.38■■□□□ 1.17
CSF1-204ENST00000369802 U2SURPO15042 1029 aaKnown RBP22.37■■□□□ 1.17
CSF1-204ENST00000369802 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
CSF1-204ENST00000369802 PTPRUQ92729 1446 aa22.36■■□□□ 1.17
CSF1-204ENST00000369802 PLEKHF1Q96S99 279 aa22.35■■□□□ 1.17
CSF1-204ENST00000369802 NCKAP5LQ9HCH0 1330 aa22.35■■□□□ 1.17
CSF1-204ENST00000369802 PRR36Q9H6K5 1346 aa22.35■■□□□ 1.17
CSF1-204ENST00000369802 DIAPH1O60610 1272 aaKnown RBP22.34■■□□□ 1.17
CSF1-204ENST00000369802 SLC26A8Q96RN1 970 aa22.34■■□□□ 1.17
CSF1-204ENST00000369802 DIP2AQ14689 1571 aa22.33■■□□□ 1.17
CSF1-204ENST00000369802 BCAR3O75815 825 aa22.33■■□□□ 1.16
CSF1-204ENST00000369802 POLKQ9UBT6 870 aa22.32■■□□□ 1.16
CSF1-204ENST00000369802 NME9Q86XW9 330 aa22.32■■□□□ 1.16
CSF1-204ENST00000369802 THEMISQ8N1K5 641 aaPredicted RBP22.32■■□□□ 1.16
CSF1-204ENST00000369802 NRKQ7Z2Y5 1582 aa22.32■■□□□ 1.16
CSF1-204ENST00000369802 TBX22Q9Y458 520 aa22.3■■□□□ 1.16
CSF1-204ENST00000369802 RIMS1Q86UR5 1692 aaKnown RBP22.3■■□□□ 1.16
CSF1-204ENST00000369802 FBLN1P23142 703 aa22.3■■□□□ 1.16
CSF1-204ENST00000369802 ZNF692Q9BU19 519 aaPredicted RBP22.3■■□□□ 1.16
CSF1-204ENST00000369802 MAPK8IP3Q9UPT6 1336 aa22.29■■□□□ 1.16
CSF1-204ENST00000369802 LRRC7Q96NW7 1537 aa22.28■■□□□ 1.16
CSF1-204ENST00000369802 CEP170BQ9Y4F5 1589 aaPredicted RBP22.28■■□□□ 1.16
CSF1-204ENST00000369802 TMPOP42166 694 aaKnown RBP22.28■■□□□ 1.16
CSF1-204ENST00000369802 AATKQ6ZMQ8 1374 aa22.28■■□□□ 1.16
CSF1-204ENST00000369802 PTCH1Q13635 1447 aa22.28■■□□□ 1.16
CSF1-204ENST00000369802 ZRANB1Q9UGI0 708 aa22.28■■□□□ 1.16
CSF1-204ENST00000369802 AMOTL2Q9Y2J4 779 aa22.27■■□□□ 1.16
CSF1-204ENST00000369802 CDK12Q9NYV4 1490 aaPredicted RBP22.27■■□□□ 1.16
CSF1-204ENST00000369802 FANCIQ9NVI1 1328 aa22.27■■□□□ 1.16
CSF1-204ENST00000369802 XRN1Q8IZH2 1706 aaKnown RBP22.27■■□□□ 1.16
CSF1-204ENST00000369802 PNNQ9H307 717 aaKnown RBP22.26■■□□□ 1.15
CSF1-204ENST00000369802 PPM1GO15355 546 aaPredicted RBP22.26■■□□□ 1.15
CSF1-204ENST00000369802 MYH16Q9H6N6 1097 aa22.26■■□□□ 1.15
CSF1-204ENST00000369802 COG3Q96JB2 828 aa22.25■■□□□ 1.15
CSF1-204ENST00000369802 TRIM35Q9UPQ4 493 aa22.24■■□□□ 1.15
CSF1-204ENST00000369802 EMILIN1Q9Y6C2 1016 aa22.24■■□□□ 1.15
CSF1-204ENST00000369802 RGPD8O14715 1765 aaPredicted RBP22.24■■□□□ 1.15
CSF1-204ENST00000369802 FCHSD2O94868 740 aa22.23■■□□□ 1.15
CSF1-204ENST00000369802 PLEKHG3A1L390 1219 aa22.23■■□□□ 1.15
CSF1-204ENST00000369802 RARSP54136 660 aaKnown RBP22.23■■□□□ 1.15
CSF1-204ENST00000369802 ACEP12821 1306 aa22.22■■□□□ 1.15
CSF1-204ENST00000369802 KDM2BQ8NHM5 1336 aa22.22■■□□□ 1.15
CSF1-204ENST00000369802 PDE3AQ14432 1141 aa22.21■■□□□ 1.15
CSF1-204ENST00000369802 RSPH6AQ9H0K4 717 aa22.21■■□□□ 1.15
CSF1-204ENST00000369802 NALCNQ8IZF0 1738 aa22.21■■□□□ 1.15
CSF1-204ENST00000369802 TCERG1O14776 1098 aaKnown RBP22.21■■□□□ 1.15
CSF1-204ENST00000369802 NUTM2FA1L443 756 aa22.2■■□□□ 1.14
CSF1-204ENST00000369802 TTC21BQ7Z4L5 1316 aa22.2■■□□□ 1.14
CSF1-204ENST00000369802 ZNF142P52746 1687 aaPredicted RBP22.2■■□□□ 1.14
CSF1-204ENST00000369802 USP6P35125 1406 aa22.2■■□□□ 1.14
CSF1-204ENST00000369802 RIPK4P57078 832 aa22.2■■□□□ 1.14
CSF1-204ENST00000369802 IL16Q14005 1332 aa22.19■■□□□ 1.14
CSF1-204ENST00000369802 IL13P35225 146 aa22.19■■□□□ 1.14
CSF1-204ENST00000369802 CANXP27824 592 aaKnown RBP22.18■■□□□ 1.14
CSF1-204ENST00000369802 PRKAR2BP31323 418 aa22.18■■□□□ 1.14
CSF1-204ENST00000369802 ADAMTSL3P82987 1691 aa22.18■■□□□ 1.14
CSF1-204ENST00000369802 OVOS2A0A0J9YW53 1432 aa22.18■■□□□ 1.14
CSF1-204ENST00000369802 OVOS2Q6IE36 1432 aa22.18■■□□□ 1.14
CSF1-204ENST00000369802 CENPQQ7L2Z9 268 aaPredicted RBP22.17■■□□□ 1.14
CSF1-204ENST00000369802 RRS1Q15050 365 aaKnown RBP22.17■■□□□ 1.14
CSF1-204ENST00000369802 TSR2Q969E8 191 aaKnown RBP22.16■■□□□ 1.14
CSF1-204ENST00000369802 PIK3R4Q99570 1358 aa22.16■■□□□ 1.14
CSF1-204ENST00000369802 DLG5Q8TDM6 1919 aa22.15■■□□□ 1.14
CSF1-204ENST00000369802 SSH2Q76I76 1423 aa22.15■■□□□ 1.14
CSF1-204ENST00000369802 CT47B1P0C2W7 299 aaPredicted RBP22.15■■□□□ 1.14
CSF1-204ENST00000369802 NEFMP07197 916 aa22.15■■□□□ 1.14
CSF1-204ENST00000369802 HMOX1P09601 288 aa22.15■■□□□ 1.14
CSF1-204ENST00000369802 FRAT1Q92837 279 aaPredicted RBP22.15■■□□□ 1.14
CSF1-204ENST00000369802 CHD2O14647 1828 aaKnown RBP22.14■■□□□ 1.13
CSF1-204ENST00000369802 MS4A1P11836 297 aa22.14■■□□□ 1.13
CSF1-204ENST00000369802 PANK1Q8TE04 598 aa22.14■■□□□ 1.13
CSF1-204ENST00000369802 FMN2Q9NZ56 1722 aa22.13■■□□□ 1.13
CSF1-204ENST00000369802 SETD1BQ9UPS6 1966 aaKnown RBP22.12■■□□□ 1.13
CSF1-204ENST00000369802 EXOSC9Q06265 439 aaKnown RBP22.12■■□□□ 1.13
CSF1-204ENST00000369802 BCL2L13Q9BXK5 485 aa22.12■■□□□ 1.13
CSF1-204ENST00000369802 PHACTR3Q96KR7 559 aa22.12■■□□□ 1.13
CSF1-204ENST00000369802 PEAK1Q9H792 1746 aa22.11■■□□□ 1.13
CSF1-204ENST00000369802 MSH5O43196 834 aa22.11■■□□□ 1.13
CSF1-204ENST00000369802 NFE2L2Q16236 605 aa22.11■■□□□ 1.13
CSF1-204ENST00000369802 COG6Q9Y2V7 657 aa22.11■■□□□ 1.13
CSF1-204ENST00000369802 KCNA6P17658 529 aa22.11■■□□□ 1.13
CSF1-204ENST00000369802 PMFBP1Q8TBY8 1022 aa22.09■■□□□ 1.13
CSF1-204ENST00000369802 USP31Q70CQ4 1352 aa22.09■■□□□ 1.13
CSF1-204ENST00000369802 SKAP1Q86WV1 359 aa22.09■■□□□ 1.13
CSF1-204ENST00000369802 ANKARQ7Z5J8 1434 aa22.09■■□□□ 1.13
CSF1-204ENST00000369802 TTC21AQ8NDW8 1320 aa22.08■■□□□ 1.13
CSF1-204ENST00000369802 CLUAP1Q96AJ1 413 aa22.07■■□□□ 1.12
CSF1-204ENST00000369802 TNNQ9UQP3 1299 aa22.07■■□□□ 1.12
CSF1-204ENST00000369802 PIK3C2AO00443 1686 aa22.07■■□□□ 1.12
CSF1-204ENST00000369802 RLBP1P12271 317 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms