RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 PLCH2O75038 1416 aa15.33■□□□□ 0.04
PHGDH-201ENST00000369407 NOS1P29475 1434 aa15.33■□□□□ 0.04
PHGDH-201ENST00000369407 NCOA3Q9Y6Q9 1424 aa15.33■□□□□ 0.04
PHGDH-201ENST00000369407 KANK1Q14678 1352 aa15.33■□□□□ 0.04
PHGDH-201ENST00000369407 TBC1D9Q6ZT07 1266 aa15.32■□□□□ 0.04
PHGDH-201ENST00000369407 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
PHGDH-201ENST00000369407 K7ELQ4 463 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-201ENST00000369407 CHAMP1Q96JM3 812 aa15.31■□□□□ 0.04
PHGDH-201ENST00000369407 FBLN1P23142 703 aa15.3■□□□□ 0.04
PHGDH-201ENST00000369407 THUMPD2Q9BTF0 503 aaKnown RBP15.3■□□□□ 0.04
PHGDH-201ENST00000369407 MCTP1Q6DN14 999 aa15.3■□□□□ 0.04
PHGDH-201ENST00000369407 PLEKHF1Q96S99 279 aa15.3■□□□□ 0.04
PHGDH-201ENST00000369407 ERCC6L2Q5T890 1561 aa15.3■□□□□ 0.04
PHGDH-201ENST00000369407 PKP1Q13835 747 aa15.29■□□□□ 0.04
PHGDH-201ENST00000369407 SKOR2Q2VWA4 1001 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-201ENST00000369407 ZBTB7CA1YPR0 619 aa15.29■□□□□ 0.04
PHGDH-201ENST00000369407 CAVIN1Q6NZI2 390 aaKnown RBP15.29■□□□□ 0.04
PHGDH-201ENST00000369407 STK26Q9P289 416 aa15.29■□□□□ 0.04
PHGDH-201ENST00000369407 ISY1Q9ULR0 285 aaKnown RBP15.29■□□□□ 0.04
PHGDH-201ENST00000369407 CIZ1Q9ULV3 898 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-201ENST00000369407 MAP3K4Q9Y6R4 1608 aa15.28■□□□□ 0.04
PHGDH-201ENST00000369407 BAG4O95429 457 aaKnown RBP15.28■□□□□ 0.04
PHGDH-201ENST00000369407 BMP2KLQ5H9B9 411 aa15.28■□□□□ 0.04
PHGDH-201ENST00000369407 PDE4CQ08493 712 aa15.27■□□□□ 0.04
PHGDH-201ENST00000369407 CCDC173Q0VFZ6 552 aa15.27■□□□□ 0.04
PHGDH-201ENST00000369407 IPO8O15397 1037 aaKnown RBP15.27■□□□□ 0.03
PHGDH-201ENST00000369407 MSNP26038 577 aaKnown RBP15.27■□□□□ 0.03
PHGDH-201ENST00000369407 FOXD4L5Q5VV16 416 aaPredicted RBP15.27■□□□□ 0.03
PHGDH-201ENST00000369407 FOXD4L4Q8WXT5 416 aaPredicted RBP15.27■□□□□ 0.03
PHGDH-201ENST00000369407 ANP32BQ92688 251 aaKnown RBP15.27■□□□□ 0.03
PHGDH-201ENST00000369407 GOLGA6L22H0YM25 854 aa15.26■□□□□ 0.03
PHGDH-201ENST00000369407 ZSCAN30Q86W11 494 aa15.26■□□□□ 0.03
PHGDH-201ENST00000369407 R3HCC1Q9Y3T6 440 aaKnown RBP15.26■□□□□ 0.03
PHGDH-201ENST00000369407 ABCC1P33527 1531 aa15.26■□□□□ 0.03
PHGDH-201ENST00000369407 RBM27Q9P2N5 1060 aaKnown RBP15.26■□□□□ 0.03
PHGDH-201ENST00000369407 ATAD2Q6PL18 1390 aa15.26■□□□□ 0.03
PHGDH-201ENST00000369407 TPM2P07951 284 aa15.26■□□□□ 0.03
PHGDH-201ENST00000369407 FAM13BQ9NYF5 915 aa15.26■□□□□ 0.03
PHGDH-201ENST00000369407 CT47B1P0C2W7 299 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-201ENST00000369407 SRPK2P78362 688 aaKnown RBP15.25■□□□□ 0.03
PHGDH-201ENST00000369407 APBB1O00213 710 aa15.25■□□□□ 0.03
PHGDH-201ENST00000369407 XPCQ01831 940 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-201ENST00000369407 SIRT2Q8IXJ6 389 aa15.25■□□□□ 0.03
PHGDH-201ENST00000369407 TSPYL6Q8N831 410 aa15.25■□□□□ 0.03
PHGDH-201ENST00000369407 C14orf93Q9H972 538 aaKnown RBP15.25■□□□□ 0.03
PHGDH-201ENST00000369407 AK9Q5TCS8 1911 aa15.25■□□□□ 0.03
PHGDH-201ENST00000369407 PPIP5K1Q6PFW1 1433 aa15.25■□□□□ 0.03
PHGDH-201ENST00000369407 KIF16BQ96L93 1317 aa15.24■□□□□ 0.03
PHGDH-201ENST00000369407 GGT6Q6P531 493 aa15.24■□□□□ 0.03
PHGDH-201ENST00000369407 C16orf71Q8IYS4 520 aaPredicted RBP15.24■□□□□ 0.03
PHGDH-201ENST00000369407 ZBTB7BO15156 539 aaPredicted RBP15.24■□□□□ 0.03
PHGDH-201ENST00000369407 PPP1R9BQ96SB3 815 aa15.24■□□□□ 0.03
PHGDH-201ENST00000369407 ZHX1Q9UKY1 873 aaPredicted RBP15.24■□□□□ 0.03
PHGDH-201ENST00000369407 SBNO2Q9Y2G9 1366 aa15.23■□□□□ 0.03
PHGDH-201ENST00000369407 RBSNQ9H1K0 784 aa15.23■□□□□ 0.03
PHGDH-201ENST00000369407 FGD1P98174 961 aa15.23■□□□□ 0.03
PHGDH-201ENST00000369407 KLHL40Q2TBA0 621 aa15.23■□□□□ 0.03
PHGDH-201ENST00000369407 PRDM10Q9NQV6 1147 aa15.23■□□□□ 0.03
PHGDH-201ENST00000369407 ZFYVE16Q7Z3T8 1539 aa15.23■□□□□ 0.03
PHGDH-201ENST00000369407 MYOM2P54296 1465 aa15.22■□□□□ 0.03
PHGDH-201ENST00000369407 CFAP65Q6ZU64 1925 aaKnown RBP15.22■□□□□ 0.03
PHGDH-201ENST00000369407 EVC2Q86UK5 1308 aa15.22■□□□□ 0.03
PHGDH-201ENST00000369407 HMOX1P09601 288 aa15.22■□□□□ 0.03
PHGDH-201ENST00000369407 GSPT1P15170 499 aaKnown RBP15.22■□□□□ 0.03
PHGDH-201ENST00000369407 ZSCAN23Q3MJ62 389 aa15.22■□□□□ 0.03
PHGDH-201ENST00000369407 PRPF40AO75400 957 aaKnown RBP15.22■□□□□ 0.03
PHGDH-201ENST00000369407 CALD1Q05682 793 aaKnown RBP15.22■□□□□ 0.03
PHGDH-201ENST00000369407 OFD1O75665 1012 aa15.21■□□□□ 0.03
PHGDH-201ENST00000369407 PRIM1P49642 420 aaKnown RBP15.21■□□□□ 0.03
PHGDH-201ENST00000369407 AEBP2Q6ZN18 517 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-201ENST00000369407 ZGPATQ8N5A5 531 aaKnown RBP15.21■□□□□ 0.03
PHGDH-201ENST00000369407 PDCL3Q9H2J4 239 aa15.21■□□□□ 0.03
PHGDH-201ENST00000369407 KIAA1210Q9ULL0 1709 aa15.21■□□□□ 0.03
PHGDH-201ENST00000369407 TET3O43151 1660 aa15.21■□□□□ 0.03
PHGDH-201ENST00000369407 OTUD7AQ8TE49 926 aaPredicted RBP15.2■□□□□ 0.02
PHGDH-201ENST00000369407 PRKAR2BP31323 418 aa15.2■□□□□ 0.02
PHGDH-201ENST00000369407 BCL11BQ9C0K0 894 aaPredicted RBP15.2■□□□□ 0.02
PHGDH-201ENST00000369407 MROH2AA6NES4 1674 aa15.2■□□□□ 0.02
PHGDH-201ENST00000369407 ANKRD36BQ8N2N9 1353 aa15.2■□□□□ 0.02
PHGDH-201ENST00000369407 ABCC11Q96J66 1382 aa15.2■□□□□ 0.02
PHGDH-201ENST00000369407 DIAPH1O60610 1272 aaKnown RBP15.2■□□□□ 0.02
PHGDH-201ENST00000369407 CDC45O75419 566 aa15.2■□□□□ 0.02
PHGDH-201ENST00000369407 MPNDQ8N594 471 aa15.2■□□□□ 0.02
PHGDH-201ENST00000369407 A0A1W2PP64 1363 aa15.19■□□□□ 0.02
PHGDH-201ENST00000369407 FYB1O15117 783 aa15.19■□□□□ 0.02
PHGDH-201ENST00000369407 MINK1Q8N4C8 1332 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-201ENST00000369407 RNF214Q8ND24 703 aa15.19■□□□□ 0.02
PHGDH-201ENST00000369407 GCC1Q96CN9 775 aa15.19■□□□□ 0.02
PHGDH-201ENST00000369407 LMBRD1Q9NUN5 540 aa15.19■□□□□ 0.02
PHGDH-201ENST00000369407 PHACTR3Q96KR7 559 aa15.18■□□□□ 0.02
PHGDH-201ENST00000369407 NSFL1CQ9UNZ2 370 aaKnown RBP15.18■□□□□ 0.02
PHGDH-201ENST00000369407 SHROOM2Q13796 1616 aa15.18■□□□□ 0.02
PHGDH-201ENST00000369407 QRICH2Q9H0J4 1663 aa15.18■□□□□ 0.02
PHGDH-201ENST00000369407 PTMSP20962 102 aa15.18■□□□□ 0.02
PHGDH-201ENST00000369407 FOXD4L6Q3SYB3 417 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-201ENST00000369407 TPRNQ4KMQ1 711 aa15.17■□□□□ 0.02
PHGDH-201ENST00000369407 FOXD4L3Q6VB84 417 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-201ENST00000369407 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.17■□□□□ 0.02
PHGDH-201ENST00000369407 MRPL50Q8N5N7 158 aaKnown RBP15.17■□□□□ 0.02
PHGDH-201ENST00000369407 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms