RNA–Protein interactions for RNA: ENST00000369049.8

ECM1-203, Transcript of extracellular matrix protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECM1, Length 1,925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-203ENST00000369049 POLR3AO14802 1390 aaPredicted RBP17.75■□□□□ 0.43
ECM1-203ENST00000369049 SRPK2P78362 688 aaKnown RBP17.74■□□□□ 0.43
ECM1-203ENST00000369049 TOPAZ1Q8N9V7 1692 aa17.73■□□□□ 0.43
ECM1-203ENST00000369049 RALGAPBQ86X10 1494 aa17.73■□□□□ 0.43
ECM1-203ENST00000369049 BRD4O60885 1362 aaPredicted RBP17.73■□□□□ 0.43
ECM1-203ENST00000369049 ROCK2O75116 1388 aaKnown RBP17.72■□□□□ 0.43
ECM1-203ENST00000369049 ACEP12821 1306 aa17.72■□□□□ 0.43
ECM1-203ENST00000369049 PLEKHG5O94827 1062 aa17.72■□□□□ 0.43
ECM1-203ENST00000369049 TRIM26Q12899 539 aaPredicted RBP17.72■□□□□ 0.43
ECM1-203ENST00000369049 NBPF8Q3BBV2 869 aa17.72■□□□□ 0.43
ECM1-203ENST00000369049 CCDC125Q86Z20 511 aa17.72■□□□□ 0.43
ECM1-203ENST00000369049 PLCH1Q4KWH8 1693 aa17.72■□□□□ 0.43
ECM1-203ENST00000369049 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
ECM1-203ENST00000369049 FAM83GA6ND36 823 aa17.71■□□□□ 0.43
ECM1-203ENST00000369049 COL14A1Q05707 1796 aaKnown RBP17.71■□□□□ 0.43
ECM1-203ENST00000369049 EVC2Q86UK5 1308 aa17.71■□□□□ 0.42
ECM1-203ENST00000369049 QRICH2Q9H0J4 1663 aa17.7■□□□□ 0.42
ECM1-203ENST00000369049 CCDC9Q9Y3X0 531 aaKnown RBP17.7■□□□□ 0.42
ECM1-203ENST00000369049 PPIP5K1Q6PFW1 1433 aa17.69■□□□□ 0.42
ECM1-203ENST00000369049 GLI3P10071 1580 aa17.68■□□□□ 0.42
ECM1-203ENST00000369049 ONECUT3O60422 494 aaPredicted RBP17.67■□□□□ 0.42
ECM1-203ENST00000369049 PRDM11Q9NQV5 511 aa17.67■□□□□ 0.42
ECM1-203ENST00000369049 BTG4Q9NY30 223 aa17.67■□□□□ 0.42
ECM1-203ENST00000369049 CABP2Q9NPB3 220 aa17.66■□□□□ 0.42
ECM1-203ENST00000369049 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
ECM1-203ENST00000369049 CRYBG1Q9Y4K1 1723 aa17.66■□□□□ 0.42
ECM1-203ENST00000369049 ABTB2Q8N961 1025 aa17.66■□□□□ 0.42
ECM1-203ENST00000369049 NLRP13Q86W25 1043 aa17.64■□□□□ 0.42
ECM1-203ENST00000369049 SEPT12Q8IYM1 358 aa17.64■□□□□ 0.42
ECM1-203ENST00000369049 NRAPQ86VF7 1730 aa17.64■□□□□ 0.41
ECM1-203ENST00000369049 PHRF1Q9P1Y6 1649 aaKnown RBP17.63■□□□□ 0.41
ECM1-203ENST00000369049 CABP1Q9NZU7 370 aa17.62■□□□□ 0.41
ECM1-203ENST00000369049 ZNF692Q9BU19 519 aaPredicted RBP17.62■□□□□ 0.41
ECM1-203ENST00000369049 KIAA0232Q92628 1395 aa17.61■□□□□ 0.41
ECM1-203ENST00000369049 USP19O94966 1318 aa17.61■□□□□ 0.41
ECM1-203ENST00000369049 SBNO2Q9Y2G9 1366 aa17.61■□□□□ 0.41
ECM1-203ENST00000369049 KRT27Q7Z3Y8 459 aa17.6■□□□□ 0.41
ECM1-203ENST00000369049 CARD11Q9BXL7 1154 aa17.6■□□□□ 0.41
ECM1-203ENST00000369049 SPATA31A5Q5VU36 1347 aa17.6■□□□□ 0.41
ECM1-203ENST00000369049 SPATA31A7Q8IWB4 1347 aa17.6■□□□□ 0.41
ECM1-203ENST00000369049 CPDO75976 1380 aa17.6■□□□□ 0.41
ECM1-203ENST00000369049 USP6P35125 1406 aa17.6■□□□□ 0.41
ECM1-203ENST00000369049 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
ECM1-203ENST00000369049 SF3B2Q13435 895 aaKnown RBP17.6■□□□□ 0.41
ECM1-203ENST00000369049 BLMP54132 1417 aaPredicted RBP17.59■□□□□ 0.41
ECM1-203ENST00000369049 A0A0G2JS52 829 aa17.59■□□□□ 0.41
ECM1-203ENST00000369049 NUTM2GQ5VZR2 741 aa17.59■□□□□ 0.41
ECM1-203ENST00000369049 ZC3H6P61129 1189 aaKnown RBP17.59■□□□□ 0.41
ECM1-203ENST00000369049 EVA1CP58658 441 aa17.58■□□□□ 0.4
ECM1-203ENST00000369049 FAM98CQ17RN3 349 aaKnown RBP17.58■□□□□ 0.4
ECM1-203ENST00000369049 NRKQ7Z2Y5 1582 aa17.57■□□□□ 0.4
ECM1-203ENST00000369049 GCP02774 474 aa17.57■□□□□ 0.4
ECM1-203ENST00000369049 BRWD3Q6RI45 1802 aa17.56■□□□□ 0.4
ECM1-203ENST00000369049 CHRNA2Q15822 529 aa17.56■□□□□ 0.4
ECM1-203ENST00000369049 SPATA31A1Q5TZJ5 1347 aa17.55■□□□□ 0.4
ECM1-203ENST00000369049 TTC21AQ8NDW8 1320 aa17.55■□□□□ 0.4
ECM1-203ENST00000369049 NLRP6P59044 892 aa17.55■□□□□ 0.4
ECM1-203ENST00000369049 STRN4Q9NRL3 753 aa17.55■□□□□ 0.4
ECM1-203ENST00000369049 PUS7Q96PZ0 661 aaKnown RBP17.54■□□□□ 0.4
ECM1-203ENST00000369049 ZRANB1Q9UGI0 708 aa17.54■□□□□ 0.4
ECM1-203ENST00000369049 SSH2Q76I76 1423 aa17.54■□□□□ 0.4
ECM1-203ENST00000369049 KCNH5Q8NCM2 988 aa17.53■□□□□ 0.4
ECM1-203ENST00000369049 SLIT3O75094 1523 aa17.52■□□□□ 0.4
ECM1-203ENST00000369049 BARGINQ6ZT62 677 aa17.52■□□□□ 0.4
ECM1-203ENST00000369049 THRAP3Q9Y2W1 955 aaKnown RBP17.52■□□□□ 0.4
ECM1-203ENST00000369049 CPSF1Q10570 1443 aaKnown RBP17.51■□□□□ 0.39
ECM1-203ENST00000369049 THSD7AQ9UPZ6 1657 aa17.51■□□□□ 0.39
ECM1-203ENST00000369049 AKAP12Q02952 1782 aa17.51■□□□□ 0.39
ECM1-203ENST00000369049 TTC21BQ7Z4L5 1316 aa17.51■□□□□ 0.39
ECM1-203ENST00000369049 KTN1Q86UP2 1357 aaKnown RBP17.5■□□□□ 0.39
ECM1-203ENST00000369049 LMO7Q8WWI1 1683 aa17.5■□□□□ 0.39
ECM1-203ENST00000369049 AATKQ6ZMQ8 1374 aa17.5■□□□□ 0.39
ECM1-203ENST00000369049 CAMTA1Q9Y6Y1 1673 aa17.49■□□□□ 0.39
ECM1-203ENST00000369049 BAG6P46379 1132 aa17.49■□□□□ 0.39
ECM1-203ENST00000369049 HDGFL2Q7Z4V5 671 aaPredicted RBP17.49■□□□□ 0.39
ECM1-203ENST00000369049 TCP11L2Q8N4U5 519 aa17.49■□□□□ 0.39
ECM1-203ENST00000369049 PIK3C2AO00443 1686 aa17.48■□□□□ 0.39
ECM1-203ENST00000369049 TIMELESSQ9UNS1 1208 aa17.48■□□□□ 0.39
ECM1-203ENST00000369049 NINLQ9Y2I6 1382 aa17.47■□□□□ 0.39
ECM1-203ENST00000369049 C11orf95C9JLR9 678 aaPredicted RBP17.47■□□□□ 0.39
ECM1-203ENST00000369049 TERF2IPQ9NYB0 399 aa17.47■□□□□ 0.39
ECM1-203ENST00000369049 LARP1Q6PKG0 1096 aaKnown RBP17.47■□□□□ 0.39
ECM1-203ENST00000369049 FAM196AQ6ZSG2 479 aa17.47■□□□□ 0.39
ECM1-203ENST00000369049 CLSPNQ9HAW4 1339 aa17.46■□□□□ 0.39
ECM1-203ENST00000369049 COL5A2P05997 1499 aaPredicted RBP17.46■□□□□ 0.39
ECM1-203ENST00000369049 PDE3BQ13370 1112 aa17.46■□□□□ 0.39
ECM1-203ENST00000369049 TMC1Q8TDI8 760 aa17.46■□□□□ 0.39
ECM1-203ENST00000369049 CRB1P82279 1406 aa17.45■□□□□ 0.38
ECM1-203ENST00000369049 USP35Q9P2H5 1018 aa17.45■□□□□ 0.38
ECM1-203ENST00000369049 RGPD1P0DJD0 1748 aa17.45■□□□□ 0.38
ECM1-203ENST00000369049 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
ECM1-203ENST00000369049 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
ECM1-203ENST00000369049 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
ECM1-203ENST00000369049 ABCC6O95255 1503 aa17.43■□□□□ 0.38
ECM1-203ENST00000369049 ARHGEF25Q86VW2 580 aa17.43■□□□□ 0.38
ECM1-203ENST00000369049 EDC4Q6P2E9 1401 aaKnown RBP17.42■□□□□ 0.38
ECM1-203ENST00000369049 DEFB132Q7Z7B7 95 aa17.42■□□□□ 0.38
ECM1-203ENST00000369049 CDCA7Q9BWT1 371 aaPredicted RBP17.42■□□□□ 0.38
ECM1-203ENST00000369049 EP400Q96L91 3159 aa17.42■□□□□ 0.38
ECM1-203ENST00000369049 ST20-MTHFSA0A0A6YYL1 179 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms