RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 GPT2Q8TD30 523 aa16.19■□□□□ 0.18
NCSTN-202ENST00000368063 CDC42BPAQ5VT25 1732 aa16.18■□□□□ 0.18
NCSTN-202ENST00000368063 TMF1P82094 1093 aa16.18■□□□□ 0.18
NCSTN-202ENST00000368063 ZBTB7CA1YPR0 619 aa16.17■□□□□ 0.18
NCSTN-202ENST00000368063 CFDP1Q9UEE9 299 aaPredicted RBP16.17■□□□□ 0.18
NCSTN-202ENST00000368063 ANKRD50Q9ULJ7 1429 aa16.17■□□□□ 0.18
NCSTN-202ENST00000368063 NOLC1Q14978 699 aaKnown RBP eCLIP16.16■□□□□ 0.182e-7■□□□□ 11
NCSTN-202ENST00000368063 KNSTRNQ9Y448 316 aa16.16■□□□□ 0.18
NCSTN-202ENST00000368063 ASXL1Q8IXJ9 1541 aa16.16■□□□□ 0.18
NCSTN-202ENST00000368063 MVPQ14764 893 aaKnown RBP16.16■□□□□ 0.18
NCSTN-202ENST00000368063 WWC1Q8IX03 1113 aa16.16■□□□□ 0.18
NCSTN-202ENST00000368063 FEZ1Q99689 392 aa16.16■□□□□ 0.18
NCSTN-202ENST00000368063 GABPB1Q06547 395 aaPredicted RBP16.16■□□□□ 0.18
NCSTN-202ENST00000368063 FKBP5Q13451 457 aaPredicted RBP16.16■□□□□ 0.18
NCSTN-202ENST00000368063 HDAC1Q13547 482 aaPredicted RBP16.16■□□□□ 0.18
NCSTN-202ENST00000368063 TMEM63CQ9P1W3 806 aa16.16■□□□□ 0.18
NCSTN-202ENST00000368063 SHANK2Q9UPX8 1470 aa16.15■□□□□ 0.18
NCSTN-202ENST00000368063 PTMAP06454 111 aaKnown RBP16.15■□□□□ 0.18
NCSTN-202ENST00000368063 SPTLC3Q9NUV7 552 aa16.15■□□□□ 0.18
NCSTN-202ENST00000368063 NUP155O75694 1391 aa16.15■□□□□ 0.18
NCSTN-202ENST00000368063 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
NCSTN-202ENST00000368063 KCNJ4P48050 445 aa16.14■□□□□ 0.17
NCSTN-202ENST00000368063 SYCE3A1L190 88 aa16.14■□□□□ 0.17
NCSTN-202ENST00000368063 SYNMO15061 1565 aa16.14■□□□□ 0.17
NCSTN-202ENST00000368063 OGFRQ9NZT2 677 aa16.13■□□□□ 0.17
NCSTN-202ENST00000368063 KIF16BQ96L93 1317 aa16.13■□□□□ 0.17
NCSTN-202ENST00000368063 NUCB2P80303 420 aa16.13■□□□□ 0.17
NCSTN-202ENST00000368063 DNAJC2Q99543 621 aaKnown RBP16.13■□□□□ 0.17
NCSTN-202ENST00000368063 NPC1L1Q9UHC9 1359 aa16.13■□□□□ 0.17
NCSTN-202ENST00000368063 SLFN14P0C7P3 912 aa16.12■□□□□ 0.17
NCSTN-202ENST00000368063 ARHGEF5Q12774 1597 aa16.12■□□□□ 0.17
NCSTN-202ENST00000368063 CFAP74Q9C0B2 1584 aa16.12■□□□□ 0.17
NCSTN-202ENST00000368063 RNF214Q8ND24 703 aa16.11■□□□□ 0.17
NCSTN-202ENST00000368063 BCL2L13Q9BXK5 485 aa16.11■□□□□ 0.17
NCSTN-202ENST00000368063 PRPF40AO75400 957 aaKnown RBP16.11■□□□□ 0.17
NCSTN-202ENST00000368063 CHRM1P11229 460 aaPredicted RBP16.11■□□□□ 0.17
NCSTN-202ENST00000368063 ZFP91Q96JP5 570 aaPredicted RBP16.11■□□□□ 0.17
NCSTN-202ENST00000368063 CTIFO43310 598 aaKnown RBP16.11■□□□□ 0.17
NCSTN-202ENST00000368063 C17orf53Q8N3J3 647 aaPredicted RBP16.11■□□□□ 0.17
NCSTN-202ENST00000368063 PKP1Q13835 747 aa16.1■□□□□ 0.17
NCSTN-202ENST00000368063 TEX2Q8IWB9 1127 aa16.1■□□□□ 0.17
NCSTN-202ENST00000368063 A2MP01023 1474 aa16.1■□□□□ 0.17
NCSTN-202ENST00000368063 NSFL1CQ9UNZ2 370 aaKnown RBP16.1■□□□□ 0.17
NCSTN-202ENST00000368063 EIF2AK4Q9P2K8 1649 aaKnown RBP16.1■□□□□ 0.17
NCSTN-202ENST00000368063 RNF17Q9BXT8 1623 aaKnown RBP16.09■□□□□ 0.17
NCSTN-202ENST00000368063 TULP2O00295 520 aa16.08■□□□□ 0.17
NCSTN-202ENST00000368063 PREX2Q70Z35 1606 aa16.08■□□□□ 0.17
NCSTN-202ENST00000368063 CCDC66A2RUB6 948 aa16.08■□□□□ 0.16
NCSTN-202ENST00000368063 RIOK3O14730 519 aaKnown RBP16.08■□□□□ 0.16
NCSTN-202ENST00000368063 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
NCSTN-202ENST00000368063 IRX3P78415 501 aaPredicted RBP16.08■□□□□ 0.16
NCSTN-202ENST00000368063 BMP2KLQ5H9B9 411 aa16.07■□□□□ 0.16
NCSTN-202ENST00000368063 MYOM1P52179 1685 aa16.07■□□□□ 0.16
NCSTN-202ENST00000368063 CAPN2P17655 700 aa16.07■□□□□ 0.16
NCSTN-202ENST00000368063 CDCA8Q53HL2 280 aa16.07■□□□□ 0.16
NCSTN-202ENST00000368063 TIGD1Q96MW7 591 aa16.07■□□□□ 0.16
NCSTN-202ENST00000368063 IQSEC2Q5JU85 1478 aa16.06■□□□□ 0.16
NCSTN-202ENST00000368063 CTNNA3Q9UI47 895 aa16.06■□□□□ 0.16
NCSTN-202ENST00000368063 NUCB1Q02818 461 aa16.06■□□□□ 0.16
NCSTN-202ENST00000368063 TSPY26PQ9H489 355 aa16.06■□□□□ 0.16
NCSTN-202ENST00000368063 TTC12Q9H892 705 aaPredicted RBP16.06■□□□□ 0.16
NCSTN-202ENST00000368063 MYO5CQ9NQX4 1742 aa16.06■□□□□ 0.16
NCSTN-202ENST00000368063 UHRF1BP1LA0JNW5 1464 aa16.06■□□□□ 0.16
NCSTN-202ENST00000368063 DZIP1LQ8IYY4 767 aaKnown RBP16.05■□□□□ 0.16
NCSTN-202ENST00000368063 RGS22Q8NE09 1264 aa16.05■□□□□ 0.16
NCSTN-202ENST00000368063 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
NCSTN-202ENST00000368063 DIAPH3Q9NSV4 1193 aa16.05■□□□□ 0.16
NCSTN-202ENST00000368063 MPNDQ8N594 471 aa16.05■□□□□ 0.16
NCSTN-202ENST00000368063 ZDHHC9Q9Y397 364 aa16.05■□□□□ 0.16
NCSTN-202ENST00000368063 CCDC141Q6ZP82 1450 aa16.05■□□□□ 0.16
NCSTN-202ENST00000368063 KANK1Q14678 1352 aa16.04■□□□□ 0.16
NCSTN-202ENST00000368063 ZKSCAN2Q63HK3 967 aa16.04■□□□□ 0.16
NCSTN-202ENST00000368063 CHMP4AQ9BY43 222 aa16.04■□□□□ 0.16
NCSTN-202ENST00000368063 NCBP1Q09161 790 aaKnown RBP16.04■□□□□ 0.16
NCSTN-202ENST00000368063 TERF2Q15554 542 aa16.04■□□□□ 0.16
NCSTN-202ENST00000368063 DDX41Q9UJV9 622 aaKnown RBP16.04■□□□□ 0.16
NCSTN-202ENST00000368063 CDC42BPBQ9Y5S2 1711 aa16.03■□□□□ 0.16
NCSTN-202ENST00000368063 TBC1D9Q6ZT07 1266 aa16.03■□□□□ 0.16
NCSTN-202ENST00000368063 MBD3O95983 291 aa16.03■□□□□ 0.16
NCSTN-202ENST00000368063 LNPKQ9C0E8 428 aa16.02■□□□□ 0.16
NCSTN-202ENST00000368063 C9orf84Q5VXU9 1444 aa16.02■□□□□ 0.16
NCSTN-202ENST00000368063 SHPRHQ149N8 1683 aa16.02■□□□□ 0.15
NCSTN-202ENST00000368063 CHAMP1Q96JM3 812 aa16.02■□□□□ 0.15
NCSTN-202ENST00000368063 CWC22Q9HCG8 908 aaKnown RBP16.02■□□□□ 0.15
NCSTN-202ENST00000368063 MORC2Q9Y6X9 1032 aaPredicted RBP16.02■□□□□ 0.15
NCSTN-202ENST00000368063 SYCP1Q15431 976 aa16.01■□□□□ 0.15
NCSTN-202ENST00000368063 MAST1Q9Y2H9 1570 aa16.01■□□□□ 0.15
NCSTN-202ENST00000368063 RABEP1Q15276 862 aa16.01■□□□□ 0.15
NCSTN-202ENST00000368063 UVSSAQ2YD98 709 aa16■□□□□ 0.15
NCSTN-202ENST00000368063 WDR63Q8IWG1 891 aa16■□□□□ 0.15
NCSTN-202ENST00000368063 CHD1LQ86WJ1 897 aa16■□□□□ 0.15
NCSTN-202ENST00000368063 SECISBP2LQ93073 1101 aaKnown RBP16■□□□□ 0.15
NCSTN-202ENST00000368063 ZNF777Q9ULD5 760 aaPredicted RBP16■□□□□ 0.15
NCSTN-202ENST00000368063 DDX19BQ9UMR2 479 aa16■□□□□ 0.15
NCSTN-202ENST00000368063 IQGAP1P46940 1657 aa16■□□□□ 0.15
NCSTN-202ENST00000368063 CHAF1AQ13111 956 aaPredicted RBP16■□□□□ 0.15
NCSTN-202ENST00000368063 KIAA1524Q8TCG1 905 aa16■□□□□ 0.15
NCSTN-202ENST00000368063 SAMD9LQ8IVG5 1584 aa15.99■□□□□ 0.15
NCSTN-202ENST00000368063 CALCOCO1Q9P1Z2 691 aa15.99■□□□□ 0.15
NCSTN-202ENST00000368063 TSPY4P0CV99 314 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms