RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 IQGAP1P46940 1657 aa8.99□□□□□ -0.97
VTA1-202ENST00000367630 MBD3O95983 291 aa8.99□□□□□ -0.97
VTA1-202ENST00000367630 NOS1P29475 1434 aa8.99□□□□□ -0.97
VTA1-202ENST00000367630 GNAI3P08754 354 aa8.99□□□□□ -0.97
VTA1-202ENST00000367630 CCT4P50991 539 aaKnown RBP8.99□□□□□ -0.97
VTA1-202ENST00000367630 RPAP2Q8IXW5 612 aaPredicted RBP8.98□□□□□ -0.97
VTA1-202ENST00000367630 TCP11L2Q8N4U5 519 aa8.98□□□□□ -0.97
VTA1-202ENST00000367630 C11orf95C9JLR9 678 aaPredicted RBP8.98□□□□□ -0.97
VTA1-202ENST00000367630 ZRSR1Q15695 479 aaKnown RBP8.98□□□□□ -0.97
VTA1-202ENST00000367630 AMER1Q5JTC6 1135 aaPredicted RBP8.98□□□□□ -0.97
VTA1-202ENST00000367630 DUSP27Q5VZP5 1158 aa8.98□□□□□ -0.97
VTA1-202ENST00000367630 NBPF1Q3BBV0 1214 aa8.98□□□□□ -0.97
VTA1-202ENST00000367630 BABAM1Q9NWV8 329 aa8.98□□□□□ -0.97
VTA1-202ENST00000367630 PTPRCP08575 1304 aa8.97□□□□□ -0.97
VTA1-202ENST00000367630 CCDC34Q96HJ3 373 aa8.97□□□□□ -0.97
VTA1-202ENST00000367630 C22orf23Q9BZE7 217 aa8.97□□□□□ -0.97
VTA1-202ENST00000367630 ATP7BP35670 1465 aa8.97□□□□□ -0.97
VTA1-202ENST00000367630 PPIP5K1Q6PFW1 1433 aa8.97□□□□□ -0.97
VTA1-202ENST00000367630 RIPK4P57078 832 aa8.97□□□□□ -0.97
VTA1-202ENST00000367630 ATF7IPQ6VMQ6 1270 aa8.97□□□□□ -0.97
VTA1-202ENST00000367630 PER1O15534 1290 aaPredicted RBP8.97□□□□□ -0.97
VTA1-202ENST00000367630 NEUROD2Q15784 382 aa8.97□□□□□ -0.97
VTA1-202ENST00000367630 ERC1Q8IUD2 1116 aa8.96□□□□□ -0.97
VTA1-202ENST00000367630 UGGT1Q9NYU2 1555 aa8.96□□□□□ -0.97
VTA1-202ENST00000367630 KIAA2012Q0VF49 1180 aa8.96□□□□□ -0.97
VTA1-202ENST00000367630 ADGRB3O60242 1522 aa8.96□□□□□ -0.97
VTA1-202ENST00000367630 RTL1A6NKG5 1358 aa8.96□□□□□ -0.97
VTA1-202ENST00000367630 PTMAP06454 111 aaKnown RBP8.96□□□□□ -0.98
VTA1-202ENST00000367630 MYO3AQ8NEV4 1616 aa8.96□□□□□ -0.98
VTA1-202ENST00000367630 TPM4P67936 248 aa8.96□□□□□ -0.98
VTA1-202ENST00000367630 CFAP70Q5T0N1 1121 aa8.96□□□□□ -0.98
VTA1-202ENST00000367630 CCDC146Q8IYE0 955 aa8.96□□□□□ -0.98
VTA1-202ENST00000367630 TTC21AQ8NDW8 1320 aa8.95□□□□□ -0.98
VTA1-202ENST00000367630 NFE2L2Q16236 605 aa8.95□□□□□ -0.98
VTA1-202ENST00000367630 FRMPD1Q5SYB0 1578 aa8.95□□□□□ -0.98
VTA1-202ENST00000367630 PLA2R1Q13018 1463 aa8.95□□□□□ -0.98
VTA1-202ENST00000367630 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.95□□□□□ -0.98
VTA1-202ENST00000367630 AFAP1Q8N556 730 aa8.95□□□□□ -0.98
VTA1-202ENST00000367630 ERC2O15083 957 aa8.94□□□□□ -0.98
VTA1-202ENST00000367630 TPM2P07951 284 aa8.94□□□□□ -0.98
VTA1-202ENST00000367630 MTHFSP49914 203 aa8.94□□□□□ -0.98
VTA1-202ENST00000367630 NFKBIBQ15653 356 aa8.94□□□□□ -0.98
VTA1-202ENST00000367630 VWDEQ8N2E2 1590 aa8.94□□□□□ -0.98
VTA1-202ENST00000367630 RARSP54136 660 aaKnown RBP8.93□□□□□ -0.98
VTA1-202ENST00000367630 CCDC173Q0VFZ6 552 aa8.93□□□□□ -0.98
VTA1-202ENST00000367630 SNX21Q969T3 373 aa8.93□□□□□ -0.98
VTA1-202ENST00000367630 BCL11BQ9C0K0 894 aaPredicted RBP8.93□□□□□ -0.98
VTA1-202ENST00000367630 DLC1Q96QB1 1528 aa8.93□□□□□ -0.98
VTA1-202ENST00000367630 YEATS2Q9ULM3 1422 aa8.93□□□□□ -0.98
VTA1-202ENST00000367630 DDX58O95786 925 aaKnown RBP8.93□□□□□ -0.98
VTA1-202ENST00000367630 COG6Q9Y2V7 657 aa8.93□□□□□ -0.98
VTA1-202ENST00000367630 MFAP1P55081 439 aaKnown RBP8.93□□□□□ -0.98
VTA1-202ENST00000367630 BRPF1P55201 1214 aaPredicted RBP8.93□□□□□ -0.98
VTA1-202ENST00000367630 CCDC30Q5VVM6 783 aa8.93□□□□□ -0.98
VTA1-202ENST00000367630 NRXN1Q9ULB1 1477 aa8.93□□□□□ -0.98
VTA1-202ENST00000367630 OS9Q13438 667 aaPredicted RBP8.92□□□□□ -0.98
VTA1-202ENST00000367630 RNF20Q5VTR2 975 aa8.92□□□□□ -0.98
VTA1-202ENST00000367630 EDC4Q6P2E9 1401 aaKnown RBP8.92□□□□□ -0.98
VTA1-202ENST00000367630 CLTCL1P53675 1640 aa8.92□□□□□ -0.98
VTA1-202ENST00000367630 BCORL1Q5H9F3 1711 aa8.92□□□□□ -0.98
VTA1-202ENST00000367630 RAB11FIP3O75154 756 aa8.92□□□□□ -0.98
VTA1-202ENST00000367630 FAM184AQ8NB25 1140 aa8.92□□□□□ -0.98
VTA1-202ENST00000367630 GOLGA6L4A6NEF3 574 aa8.91□□□□□ -0.98
VTA1-202ENST00000367630 KDM2BQ8NHM5 1336 aa8.91□□□□□ -0.98
VTA1-202ENST00000367630 MCM5P33992 734 aa8.91□□□□□ -0.98
VTA1-202ENST00000367630 BMP2KLQ5H9B9 411 aa8.91□□□□□ -0.98
VTA1-202ENST00000367630 PDZRN3Q9UPQ7 1066 aa8.91□□□□□ -0.98
VTA1-202ENST00000367630 AEBP1Q8IUX7 1158 aa8.91□□□□□ -0.98
VTA1-202ENST00000367630 TMPOP42166 694 aaKnown RBP8.91□□□□□ -0.98
VTA1-202ENST00000367630 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.9□□□□□ -0.98
VTA1-202ENST00000367630 ARHGEF40Q8TER5 1519 aa8.9□□□□□ -0.98
VTA1-202ENST00000367630 AATKQ6ZMQ8 1374 aa8.9□□□□□ -0.98
VTA1-202ENST00000367630 TRMT2AQ8IZ69 625 aaKnown RBP8.9□□□□□ -0.98
VTA1-202ENST00000367630 CCDC39Q9UFE4 941 aa8.9□□□□□ -0.98
VTA1-202ENST00000367630 ERVK-7P63135 1459 aa8.9□□□□□ -0.98
VTA1-202ENST00000367630 STK26Q9P289 416 aa8.9□□□□□ -0.98
VTA1-202ENST00000367630 PSMA5P28066 241 aa8.9□□□□□ -0.99
VTA1-202ENST00000367630 AMPHP49418 695 aa8.9□□□□□ -0.99
VTA1-202ENST00000367630 NPATQ14207 1427 aa8.9□□□□□ -0.99
VTA1-202ENST00000367630 ABCC3O15438 1527 aa8.9□□□□□ -0.99
VTA1-202ENST00000367630 NEXMIFQ5QGS0 1516 aa8.9□□□□□ -0.99
VTA1-202ENST00000367630 HMGB2P26583 209 aaKnown RBP8.89□□□□□ -0.99
VTA1-202ENST00000367630 PDCP20941 246 aa8.89□□□□□ -0.99
VTA1-202ENST00000367630 ANKRD1Q15327 319 aa8.89□□□□□ -0.99
VTA1-202ENST00000367630 CHD1LQ86WJ1 897 aa8.89□□□□□ -0.99
VTA1-202ENST00000367630 ZSCAN31Q96LW9 406 aaPredicted RBP8.89□□□□□ -0.99
VTA1-202ENST00000367630 AOX1Q06278 1338 aa8.89□□□□□ -0.99
VTA1-202ENST00000367630 CCDC184Q52MB2 194 aa8.89□□□□□ -0.99
VTA1-202ENST00000367630 ANKRD45Q5TZF3 282 aa8.89□□□□□ -0.99
VTA1-202ENST00000367630 RIMS2Q9UQ26 1411 aa8.89□□□□□ -0.99
VTA1-202ENST00000367630 NAP1L5Q96NT1 182 aaPredicted RBP8.89□□□□□ -0.99
VTA1-202ENST00000367630 CDK19Q9BWU1 502 aa8.89□□□□□ -0.99
VTA1-202ENST00000367630 GLI2P10070 1586 aa8.88□□□□□ -0.99
VTA1-202ENST00000367630 FAM135BQ49AJ0 1406 aa8.88□□□□□ -0.99
VTA1-202ENST00000367630 YTHDC2Q9H6S0 1430 aaKnown RBP8.88□□□□□ -0.99
VTA1-202ENST00000367630 K7ELQ4 463 aaPredicted RBP8.88□□□□□ -0.99
VTA1-202ENST00000367630 ZKSCAN1P17029 563 aaPredicted RBP8.88□□□□□ -0.99
VTA1-202ENST00000367630 CAVIN1Q6NZI2 390 aaKnown RBP8.88□□□□□ -0.99
VTA1-202ENST00000367630 THEMISQ8N1K5 641 aaPredicted RBP8.88□□□□□ -0.99
VTA1-202ENST00000367630 SLKQ9H2G2 1235 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms