RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 FAM83GA6ND36 823 aa21.38■■□□□ 1.01
CTSD-202ENST00000367196 CCDC61Q9Y6R9 512 aa21.38■■□□□ 1.01
CTSD-202ENST00000367196 POLR3AO14802 1390 aaPredicted RBP21.37■■□□□ 1.01
CTSD-202ENST00000367196 CENPJQ9HC77 1338 aaPredicted RBP21.37■■□□□ 1.01
CTSD-202ENST00000367196 BRWD3Q6RI45 1802 aa21.37■■□□□ 1.01
CTSD-202ENST00000367196 NBPF1Q3BBV0 1214 aa21.36■■□□□ 1.01
CTSD-202ENST00000367196 SEPT12Q8IYM1 358 aa21.36■■□□□ 1.01
CTSD-202ENST00000367196 BTG4Q9NY30 223 aa21.36■■□□□ 1.01
CTSD-202ENST00000367196 BLMP54132 1417 aaPredicted RBP21.36■■□□□ 1.01
CTSD-202ENST00000367196 QRICH2Q9H0J4 1663 aa21.35■■□□□ 1.01
CTSD-202ENST00000367196 ONECUT3O60422 494 aaPredicted RBP21.35■■□□□ 1.01
CTSD-202ENST00000367196 PHRF1Q9P1Y6 1649 aaKnown RBP21.34■■□□□ 1.01
CTSD-202ENST00000367196 PRDM11Q9NQV5 511 aa21.34■■□□□ 1.01
CTSD-202ENST00000367196 ACEP12821 1306 aa21.33■■□□□ 1.01
CTSD-202ENST00000367196 PLEKHG3A1L390 1219 aa21.33■■□□□ 1.01
CTSD-202ENST00000367196 SRPK2P78362 688 aaKnown RBP21.33■■□□□ 1.01
CTSD-202ENST00000367196 A0A0G2JS52 829 aa21.32■■□□□ 1
CTSD-202ENST00000367196 MYT1Q01538 1121 aa21.32■■□□□ 1
CTSD-202ENST00000367196 SF3B2Q13435 895 aaKnown RBP21.32■■□□□ 1
CTSD-202ENST00000367196 TRPM1Q7Z4N2 1603 aa21.31■■□□□ 1
CTSD-202ENST00000367196 NBPF8Q3BBV2 869 aa21.31■■□□□ 1
CTSD-202ENST00000367196 KRT27Q7Z3Y8 459 aa21.31■■□□□ 1
CTSD-202ENST00000367196 L3MBTL2Q969R5 705 aa21.31■■□□□ 1
CTSD-202ENST00000367196 ZRANB1Q9UGI0 708 aa21.31■■□□□ 1
CTSD-202ENST00000367196 PPIP5K1Q6PFW1 1433 aa21.3■■□□□ 1
CTSD-202ENST00000367196 BRD4O60885 1362 aaPredicted RBP21.3■■□□□ 1
CTSD-202ENST00000367196 KIAA0232Q92628 1395 aa21.28■■□□□ 1
CTSD-202ENST00000367196 FAM98CQ17RN3 349 aaKnown RBP21.28■■□□□ 1
CTSD-202ENST00000367196 SPATA31A5Q5VU36 1347 aa21.28■■□□□ 1
CTSD-202ENST00000367196 SPATA31A7Q8IWB4 1347 aa21.28■■□□□ 1
CTSD-202ENST00000367196 ROCK2O75116 1388 aaKnown RBP21.26■□□□□ 0.99
CTSD-202ENST00000367196 ABTB2Q8N961 1025 aa21.26■□□□□ 0.99
CTSD-202ENST00000367196 NRKQ7Z2Y5 1582 aa21.26■□□□□ 0.99
CTSD-202ENST00000367196 CABP2Q9NPB3 220 aa21.25■□□□□ 0.99
CTSD-202ENST00000367196 EVC2Q86UK5 1308 aa21.25■□□□□ 0.99
CTSD-202ENST00000367196 NEUROD1Q13562 356 aa21.24■□□□□ 0.99
CTSD-202ENST00000367196 SIN3AQ96ST3 1273 aa21.24■□□□□ 0.99
CTSD-202ENST00000367196 THSD7AQ9UPZ6 1657 aa21.24■□□□□ 0.99
CTSD-202ENST00000367196 ZC3H6P61129 1189 aaKnown RBP21.23■□□□□ 0.99
CTSD-202ENST00000367196 NUTM2GQ5VZR2 741 aa21.23■□□□□ 0.99
CTSD-202ENST00000367196 NLRP13Q86W25 1043 aa21.23■□□□□ 0.99
CTSD-202ENST00000367196 USP19O94966 1318 aa21.22■□□□□ 0.99
CTSD-202ENST00000367196 CPDO75976 1380 aa21.22■□□□□ 0.99
CTSD-202ENST00000367196 RGPD1P0DJD0 1748 aa21.21■□□□□ 0.99
CTSD-202ENST00000367196 CHRNA2Q15822 529 aa21.2■□□□□ 0.98
CTSD-202ENST00000367196 SPATA31A1Q5TZJ5 1347 aa21.2■□□□□ 0.98
CTSD-202ENST00000367196 USP6P35125 1406 aa21.2■□□□□ 0.98
CTSD-202ENST00000367196 BAG6P46379 1132 aa21.19■□□□□ 0.98
CTSD-202ENST00000367196 EVA1CP58658 441 aa21.19■□□□□ 0.98
CTSD-202ENST00000367196 STRN4Q9NRL3 753 aa21.19■□□□□ 0.98
CTSD-202ENST00000367196 SSH2Q76I76 1423 aa21.19■□□□□ 0.98
CTSD-202ENST00000367196 CABP1Q9NZU7 370 aa21.18■□□□□ 0.98
CTSD-202ENST00000367196 LMO7Q8WWI1 1683 aa21.18■□□□□ 0.98
CTSD-202ENST00000367196 GCP02774 474 aa21.16■□□□□ 0.98
CTSD-202ENST00000367196 DEFB132Q7Z7B7 95 aa21.16■□□□□ 0.98
CTSD-202ENST00000367196 BARGINQ6ZT62 677 aa21.14■□□□□ 0.97
CTSD-202ENST00000367196 ZNF692Q9BU19 519 aaPredicted RBP21.14■□□□□ 0.97
CTSD-202ENST00000367196 CAMTA1Q9Y6Y1 1673 aa21.14■□□□□ 0.97
CTSD-202ENST00000367196 SLIT3O75094 1523 aa21.14■□□□□ 0.97
CTSD-202ENST00000367196 NLRP6P59044 892 aa21.13■□□□□ 0.97
CTSD-202ENST00000367196 AKAP12Q02952 1782 aa21.13■□□□□ 0.97
CTSD-202ENST00000367196 TONSLQ96HA7 1378 aa21.12■□□□□ 0.97
CTSD-202ENST00000367196 SBNO2Q9Y2G9 1366 aa21.12■□□□□ 0.97
CTSD-202ENST00000367196 USP35Q9P2H5 1018 aa21.12■□□□□ 0.97
CTSD-202ENST00000367196 THRAP3Q9Y2W1 955 aaKnown RBP21.12■□□□□ 0.97
CTSD-202ENST00000367196 PIK3C2AO00443 1686 aa21.12■□□□□ 0.97
CTSD-202ENST00000367196 TCP11L2Q8N4U5 519 aa21.11■□□□□ 0.97
CTSD-202ENST00000367196 COL5A2P05997 1499 aaPredicted RBP21.11■□□□□ 0.97
CTSD-202ENST00000367196 DISP2A7MBM2 1401 aa21.11■□□□□ 0.97
CTSD-202ENST00000367196 FAM196AQ6ZSG2 479 aa21.1■□□□□ 0.97
CTSD-202ENST00000367196 TNS1Q9HBL0 1735 aaKnown RBP21.09■□□□□ 0.97
CTSD-202ENST00000367196 LARP1Q6PKG0 1096 aaKnown RBP21.09■□□□□ 0.97
CTSD-202ENST00000367196 CARD11Q9BXL7 1154 aa21.09■□□□□ 0.97
CTSD-202ENST00000367196 SRCAPQ6ZRS2 3230 aa21.09■□□□□ 0.97
CTSD-202ENST00000367196 AATKQ6ZMQ8 1374 aa21.09■□□□□ 0.97
CTSD-202ENST00000367196 TTC21AQ8NDW8 1320 aa21.08■□□□□ 0.97
CTSD-202ENST00000367196 CRB1P82279 1406 aa21.08■□□□□ 0.97
CTSD-202ENST00000367196 PDE3BQ13370 1112 aa21.08■□□□□ 0.97
CTSD-202ENST00000367196 FAM182BQ5T319 152 aa21.07■□□□□ 0.96
CTSD-202ENST00000367196 KCNH5Q8NCM2 988 aa21.07■□□□□ 0.96
CTSD-202ENST00000367196 PARP4Q9UKK3 1724 aaKnown RBP21.07■□□□□ 0.96
CTSD-202ENST00000367196 ZBTB7CA1YPR0 619 aa21.06■□□□□ 0.96
CTSD-202ENST00000367196 KTN1Q86UP2 1357 aaKnown RBP21.06■□□□□ 0.96
CTSD-202ENST00000367196 TTC21BQ7Z4L5 1316 aa21.05■□□□□ 0.96
CTSD-202ENST00000367196 CPSF1Q10570 1443 aaKnown RBP21.05■□□□□ 0.96
CTSD-202ENST00000367196 MON2Q7Z3U7 1717 aa21.05■□□□□ 0.96
CTSD-202ENST00000367196 C11orf95C9JLR9 678 aaPredicted RBP21.05■□□□□ 0.96
CTSD-202ENST00000367196 PARD3Q8TEW0 1356 aa21.04■□□□□ 0.96
CTSD-202ENST00000367196 EN1Q05925 392 aaPredicted RBP21.03■□□□□ 0.96
CTSD-202ENST00000367196 LRP5O75197 1615 aa21.02■□□□□ 0.96
CTSD-202ENST00000367196 ABCC6O95255 1503 aa21.02■□□□□ 0.96
CTSD-202ENST00000367196 COL18A1P39060 1754 aa21.01■□□□□ 0.95
CTSD-202ENST00000367196 TRIM37O94972 964 aa21.01■□□□□ 0.95
CTSD-202ENST00000367196 TOM1L2Q6ZVM7 507 aa21■□□□□ 0.95
CTSD-202ENST00000367196 WDR17Q8IZU2 1322 aa21■□□□□ 0.95
CTSD-202ENST00000367196 TRIM26Q12899 539 aaPredicted RBP20.99■□□□□ 0.95
CTSD-202ENST00000367196 WNK3Q9BYP7 1800 aa20.99■□□□□ 0.95
CTSD-202ENST00000367196 USP54Q70EL1 1684 aa20.99■□□□□ 0.95
CTSD-202ENST00000367196 OVOS2A0A0G2JMS6 1433 aa20.98■□□□□ 0.95
CTSD-202ENST00000367196 OVOS2A0A0J9YW53 1432 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms