RNA–Protein interactions for RNA: ENST00000367186.7

SCAF8-202, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-202ENST00000367186 MAP7D2Q96T17 732 aa12.56□□□□□ -0.4
SCAF8-202ENST00000367186 NLRP6P59044 892 aa12.55□□□□□ -0.4
SCAF8-202ENST00000367186 IKQ13123 557 aaPredicted RBP12.55□□□□□ -0.4
SCAF8-202ENST00000367186 MAP4K4O95819 1239 aaPredicted RBP12.55□□□□□ -0.4
SCAF8-202ENST00000367186 HSP90AB4PQ58FF6 505 aa12.55□□□□□ -0.4
SCAF8-202ENST00000367186 WASHC2AQ641Q2 1341 aa12.55□□□□□ -0.4
SCAF8-202ENST00000367186 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.54□□□□□ -0.4
SCAF8-202ENST00000367186 EPS15P42566 896 aa12.54□□□□□ -0.4
SCAF8-202ENST00000367186 CYB5RLQ6IPT4 315 aa12.54□□□□□ -0.4
SCAF8-202ENST00000367186 NAT10Q9H0A0 1025 aaKnown RBP12.54□□□□□ -0.4
SCAF8-202ENST00000367186 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.54□□□□□ -0.42e-6■■■■■ 56.3
SCAF8-202ENST00000367186 PRKAR2BP31323 418 aa12.54□□□□□ -0.4
SCAF8-202ENST00000367186 HSP90AB2PQ58FF8 381 aa12.54□□□□□ -0.4
SCAF8-202ENST00000367186 MRC2Q9UBG0 1479 aa12.53□□□□□ -0.4
SCAF8-202ENST00000367186 CCDC7Q96M83 1385 aa12.53□□□□□ -0.4
SCAF8-202ENST00000367186 SIL1Q9H173 461 aa12.53□□□□□ -0.4
SCAF8-202ENST00000367186 FILIP1Q7Z7B0 1213 aa12.53□□□□□ -0.4
SCAF8-202ENST00000367186 STK38Q15208 465 aa12.52□□□□□ -0.4
SCAF8-202ENST00000367186 ACBD3Q9H3P7 528 aa12.52□□□□□ -0.4
SCAF8-202ENST00000367186 RAPGEF2Q9Y4G8 1499 aa12.52□□□□□ -0.4
SCAF8-202ENST00000367186 CDR1P51861 262 aa12.52□□□□□ -0.41
SCAF8-202ENST00000367186 RBM33Q96EV2 1170 aaKnown RBP12.52□□□□□ -0.41
SCAF8-202ENST00000367186 TSPY26PQ9H489 355 aa12.52□□□□□ -0.41
SCAF8-202ENST00000367186 MBD3O95983 291 aa12.52□□□□□ -0.41
SCAF8-202ENST00000367186 CFAP70Q5T0N1 1121 aa12.52□□□□□ -0.41
SCAF8-202ENST00000367186 CCDC184Q52MB2 194 aa12.51□□□□□ -0.41
SCAF8-202ENST00000367186 CALRP27797 417 aaKnown RBP12.51□□□□□ -0.41
SCAF8-202ENST00000367186 CNTROBQ8N137 903 aa12.51□□□□□ -0.41
SCAF8-202ENST00000367186 HSP90AB3PQ58FF7 597 aa12.51□□□□□ -0.41
SCAF8-202ENST00000367186 SLC4A2P04920 1241 aa12.5□□□□□ -0.41
SCAF8-202ENST00000367186 ME1P48163 572 aa12.5□□□□□ -0.41
SCAF8-202ENST00000367186 CCDC173Q0VFZ6 552 aa12.5□□□□□ -0.41
SCAF8-202ENST00000367186 NBPF1Q3BBV0 1214 aa12.5□□□□□ -0.41
SCAF8-202ENST00000367186 SERPINC1P01008 464 aa12.5□□□□□ -0.41
SCAF8-202ENST00000367186 TWISTNBQ3B726 338 aaPredicted RBP12.5□□□□□ -0.41
SCAF8-202ENST00000367186 SLC12A5Q9H2X9 1139 aa12.5□□□□□ -0.41
SCAF8-202ENST00000367186 NOB1Q9ULX3 412 aaKnown RBP12.5□□□□□ -0.41
SCAF8-202ENST00000367186 PSMA5P28066 241 aa12.5□□□□□ -0.41
SCAF8-202ENST00000367186 NOM1Q5C9Z4 860 aaKnown RBP12.5□□□□□ -0.41
SCAF8-202ENST00000367186 CENPHQ9H3R5 247 aa12.5□□□□□ -0.41
SCAF8-202ENST00000367186 AKNAQ7Z591 1439 aa12.49□□□□□ -0.41
SCAF8-202ENST00000367186 CT47B1P0C2W7 299 aaPredicted RBP12.49□□□□□ -0.41
SCAF8-202ENST00000367186 BACH2Q9BYV9 841 aa12.49□□□□□ -0.41
SCAF8-202ENST00000367186 ZHX3Q9H4I2 956 aa12.49□□□□□ -0.41
SCAF8-202ENST00000367186 ATP2B2Q01814 1243 aa12.49□□□□□ -0.41
SCAF8-202ENST00000367186 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
SCAF8-202ENST00000367186 IL1RAPL2Q9NP60 686 aa12.49□□□□□ -0.41
SCAF8-202ENST00000367186 ROCK1Q13464 1354 aa12.49□□□□□ -0.41
SCAF8-202ENST00000367186 GNAI3P08754 354 aa12.48□□□□□ -0.41
SCAF8-202ENST00000367186 FERMT3Q86UX7 667 aa12.48□□□□□ -0.41
SCAF8-202ENST00000367186 PKNOX2Q96KN3 472 aa12.48□□□□□ -0.41
SCAF8-202ENST00000367186 PDCP20941 246 aa12.48□□□□□ -0.41
SCAF8-202ENST00000367186 NEFHP12036 1026 aa12.48□□□□□ -0.41
SCAF8-202ENST00000367186 PAF1Q8N7H5 531 aa12.48□□□□□ -0.41
SCAF8-202ENST00000367186 DDX54Q8TDD1 881 aaKnown RBP12.48□□□□□ -0.41
SCAF8-202ENST00000367186 GRPEL1Q9HAV7 217 aa12.48□□□□□ -0.41
SCAF8-202ENST00000367186 XBP1P17861 261 aa12.47□□□□□ -0.41
SCAF8-202ENST00000367186 RABEP1Q15276 862 aa12.47□□□□□ -0.41
SCAF8-202ENST00000367186 BRMS1Q9HCU9 246 aa12.47□□□□□ -0.41
SCAF8-202ENST00000367186 PPP2R1AP30153 589 aa12.47□□□□□ -0.41
SCAF8-202ENST00000367186 ESPNB1AK53 854 aa12.47□□□□□ -0.41
SCAF8-202ENST00000367186 HMGN5P82970 282 aaKnown RBP12.47□□□□□ -0.41
SCAF8-202ENST00000367186 CCDC112Q8NEF3 446 aa12.47□□□□□ -0.41
SCAF8-202ENST00000367186 LARP1BQ659C4 914 aaKnown RBP12.47□□□□□ -0.41
SCAF8-202ENST00000367186 PIBF1Q8WXW3 757 aa12.47□□□□□ -0.41
SCAF8-202ENST00000367186 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.41
SCAF8-202ENST00000367186 ERICH4A6NGS2 130 aa12.46□□□□□ -0.41
SCAF8-202ENST00000367186 FAM193AP78312 1265 aa12.46□□□□□ -0.41
SCAF8-202ENST00000367186 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
SCAF8-202ENST00000367186 TNMDQ9H2S6 317 aa12.46□□□□□ -0.41
SCAF8-202ENST00000367186 FILIP1LQ4L180 1135 aa12.46□□□□□ -0.41
SCAF8-202ENST00000367186 CCDC85AQ96PX6 553 aaPredicted RBP12.46□□□□□ -0.41
SCAF8-202ENST00000367186 SART3Q15020 963 aaKnown RBP12.46□□□□□ -0.42
SCAF8-202ENST00000367186 HDGFL1Q5TGJ6 251 aa12.46□□□□□ -0.42
SCAF8-202ENST00000367186 UPF3BQ9BZI7 483 aaKnown RBP12.45□□□□□ -0.42
SCAF8-202ENST00000367186 SULT6B1Q6IMI4 303 aa12.45□□□□□ -0.42
SCAF8-202ENST00000367186 CWC22Q9HCG8 908 aaKnown RBP12.45□□□□□ -0.42
SCAF8-202ENST00000367186 TBC1D2BQ9UPU7 963 aa12.45□□□□□ -0.42
SCAF8-202ENST00000367186 KRT18P05783 430 aaKnown RBP12.45□□□□□ -0.42
SCAF8-202ENST00000367186 CCDC192P0DO97 292 aa12.45□□□□□ -0.42
SCAF8-202ENST00000367186 IBSPP21815 317 aaPredicted RBP12.45□□□□□ -0.42
SCAF8-202ENST00000367186 RDXP35241 583 aaKnown RBP12.45□□□□□ -0.42
SCAF8-202ENST00000367186 TAX1BP1Q86VP1 789 aa12.45□□□□□ -0.42
SCAF8-202ENST00000367186 UQCRHLA0A096LP55 91 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 CCDC66A2RUB6 948 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 UQCRHP07919 91 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 MCM4P33991 863 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 ABTB2Q8N961 1025 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 NUP133Q8WUM0 1156 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 IGF1RP08069 1367 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 ABCA10Q8WWZ4 1543 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 MTERF4Q7Z6M4 381 aaKnown RBP12.44□□□□□ -0.42
SCAF8-202ENST00000367186 DDX11Q96FC9 970 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 ANKRD62A6NC57 917 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 CCDC30Q5VVM6 783 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 LEKR1Q6ZMV7 388 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 CDK5RAP3Q96JB5 506 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 LRRFIP2Q9Y608 721 aaKnown RBP12.44□□□□□ -0.42
SCAF8-202ENST00000367186 CYP46A1Q9Y6A2 500 aa12.44□□□□□ -0.42
SCAF8-202ENST00000367186 WDR62O43379 1518 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms