RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 SAFB2Q14151 953 aaKnown RBP eCLIP19.07■□□□□ 0.64
PRKN-204ENST00000366896 CARD14Q9BXL6 1004 aa19.07■□□□□ 0.64
PRKN-204ENST00000366896 PTCH1Q13635 1447 aa19.07■□□□□ 0.64
PRKN-204ENST00000366896 APAF1O14727 1248 aa19.06■□□□□ 0.64
PRKN-204ENST00000366896 BRPF3Q9ULD4 1205 aa19.06■□□□□ 0.64
PRKN-204ENST00000366896 NKTRP30414 1462 aaKnown RBP19.05■□□□□ 0.64
PRKN-204ENST00000366896 KCNA6P17658 529 aa19.04■□□□□ 0.64
PRKN-204ENST00000366896 NWD1Q149M9 1564 aa19.04■□□□□ 0.64
PRKN-204ENST00000366896 POLR3AO14802 1390 aaPredicted RBP19.03■□□□□ 0.64
PRKN-204ENST00000366896 TULP4Q9NRJ4 1543 aa19.03■□□□□ 0.64
PRKN-204ENST00000366896 E9PSI1 815 aa19.03■□□□□ 0.64
PRKN-204ENST00000366896 DMRT2Q9Y5R5 561 aa19.03■□□□□ 0.64
PRKN-204ENST00000366896 MINK1Q8N4C8 1332 aaPredicted RBP19.02■□□□□ 0.64
PRKN-204ENST00000366896 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.02■□□□□ 0.64
PRKN-204ENST00000366896 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.01■□□□□ 0.63
PRKN-204ENST00000366896 NINLQ9Y2I6 1382 aa19.01■□□□□ 0.63
PRKN-204ENST00000366896 FRAT1Q92837 279 aaPredicted RBP19■□□□□ 0.63
PRKN-204ENST00000366896 BCAR3O75815 825 aa19■□□□□ 0.63
PRKN-204ENST00000366896 EVC2Q86UK5 1308 aa18.99■□□□□ 0.63
PRKN-204ENST00000366896 SLC4A3P48751 1232 aa18.99■□□□□ 0.63
PRKN-204ENST00000366896 STRCP1A6NGW2 1772 aa18.98■□□□□ 0.63
PRKN-204ENST00000366896 DAXXQ9UER7 740 aaPredicted RBP18.98■□□□□ 0.63
PRKN-204ENST00000366896 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
PRKN-204ENST00000366896 FAM161AQ3B820 660 aa18.97■□□□□ 0.63
PRKN-204ENST00000366896 C8orf34Q49A92 452 aa18.96■□□□□ 0.63
PRKN-204ENST00000366896 PUS7Q96PZ0 661 aaKnown RBP18.95■□□□□ 0.62
PRKN-204ENST00000366896 USP32Q8NFA0 1604 aa18.95■□□□□ 0.62
PRKN-204ENST00000366896 PDE3AQ14432 1141 aa18.95■□□□□ 0.62
PRKN-204ENST00000366896 NCBP3Q53F19 620 aaKnown RBP18.95■□□□□ 0.62
PRKN-204ENST00000366896 CDK19Q9BWU1 502 aa18.94■□□□□ 0.62
PRKN-204ENST00000366896 NSD3Q9BZ95 1437 aa18.94■□□□□ 0.62
PRKN-204ENST00000366896 CABP2Q9NPB3 220 aa18.94■□□□□ 0.62
PRKN-204ENST00000366896 WASLO00401 505 aaPredicted RBP18.93■□□□□ 0.62
PRKN-204ENST00000366896 RGS3P49796 1198 aa18.93■□□□□ 0.62
PRKN-204ENST00000366896 SHPRHQ149N8 1683 aa18.93■□□□□ 0.62
PRKN-204ENST00000366896 CGNL1Q0VF96 1302 aa18.93■□□□□ 0.62
PRKN-204ENST00000366896 NALCNQ8IZF0 1738 aa18.92■□□□□ 0.62
PRKN-204ENST00000366896 SRPK2P78362 688 aaKnown RBP18.92■□□□□ 0.62
PRKN-204ENST00000366896 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
PRKN-204ENST00000366896 AAMPQ13685 434 aa18.92■□□□□ 0.62
PRKN-204ENST00000366896 AEBP2Q6ZN18 517 aaPredicted RBP18.92■□□□□ 0.62
PRKN-204ENST00000366896 RBM33Q96EV2 1170 aaKnown RBP18.91■□□□□ 0.62
PRKN-204ENST00000366896 WWC1Q8IX03 1113 aa18.9■□□□□ 0.62
PRKN-204ENST00000366896 SLC12A5Q9H2X9 1139 aa18.9■□□□□ 0.62
PRKN-204ENST00000366896 PROSER2Q86WR7 435 aaPredicted RBP18.9■□□□□ 0.62
PRKN-204ENST00000366896 PHF23Q9BUL5 403 aaPredicted RBP18.9■□□□□ 0.62
PRKN-204ENST00000366896 ZNF335Q9H4Z2 1342 aaPredicted RBP18.89■□□□□ 0.61
PRKN-204ENST00000366896 VIRMAQ69YN4 1812 aaKnown RBP18.89■□□□□ 0.61
PRKN-204ENST00000366896 ATAD2Q6PL18 1390 aa18.89■□□□□ 0.61
PRKN-204ENST00000366896 FRAT2O75474 233 aaPredicted RBP18.89■□□□□ 0.61
PRKN-204ENST00000366896 MORC1Q86VD1 984 aa18.89■□□□□ 0.61
PRKN-204ENST00000366896 ADGRL3Q9HAR2 1447 aa18.89■□□□□ 0.61
PRKN-204ENST00000366896 IGHDP01880 384 aa18.88■□□□□ 0.61
PRKN-204ENST00000366896 IQSEC2Q5JU85 1478 aa18.88■□□□□ 0.61
PRKN-204ENST00000366896 RRP7AQ9Y3A4 280 aaKnown RBP18.88■□□□□ 0.61
PRKN-204ENST00000366896 UBE2Q2Q8WVN8 375 aa18.87■□□□□ 0.61
PRKN-204ENST00000366896 CDC42BPGQ6DT37 1551 aa18.87■□□□□ 0.61
PRKN-204ENST00000366896 NEUROD2Q15784 382 aa18.87■□□□□ 0.61
PRKN-204ENST00000366896 CCDC27Q2M243 656 aa18.86■□□□□ 0.61
PRKN-204ENST00000366896 ATP7BP35670 1465 aa18.86■□□□□ 0.61
PRKN-204ENST00000366896 NSD2O96028 1365 aa18.86■□□□□ 0.61
PRKN-204ENST00000366896 TMEM94Q12767 1356 aa18.86■□□□□ 0.61
PRKN-204ENST00000366896 FMN2Q9NZ56 1722 aa18.86■□□□□ 0.61
PRKN-204ENST00000366896 PANK1Q8TE04 598 aa18.85■□□□□ 0.61
PRKN-204ENST00000366896 RUNDC1Q96C34 613 aa18.85■□□□□ 0.61
PRKN-204ENST00000366896 WDR63Q8IWG1 891 aa18.85■□□□□ 0.61
PRKN-204ENST00000366896 PRR36Q9H6K5 1346 aa18.85■□□□□ 0.61
PRKN-204ENST00000366896 NCOA3Q9Y6Q9 1424 aa18.84■□□□□ 0.61
PRKN-204ENST00000366896 NUDT16Q96DE0 195 aaKnown RBP18.84■□□□□ 0.61
PRKN-204ENST00000366896 COG6Q9Y2V7 657 aa18.84■□□□□ 0.61
PRKN-204ENST00000366896 XIRP1Q702N8 1843 aaKnown RBP18.84■□□□□ 0.61
PRKN-204ENST00000366896 FAM43AQ8N2R8 423 aa18.83■□□□□ 0.61
PRKN-204ENST00000366896 LRRC7Q96NW7 1537 aa18.83■□□□□ 0.61
PRKN-204ENST00000366896 CANXP27824 592 aaKnown RBP18.83■□□□□ 0.6
PRKN-204ENST00000366896 C14orf37Q86TY3 774 aa18.83■□□□□ 0.6
PRKN-204ENST00000366896 TOPAZ1Q8N9V7 1692 aa18.83■□□□□ 0.6
PRKN-204ENST00000366896 MAPK8IP3Q9UPT6 1336 aa18.82■□□□□ 0.6
PRKN-204ENST00000366896 TCP11L2Q8N4U5 519 aa18.82■□□□□ 0.6
PRKN-204ENST00000366896 CLUAP1Q96AJ1 413 aa18.82■□□□□ 0.6
PRKN-204ENST00000366896 CCDC61Q9Y6R9 512 aa18.81■□□□□ 0.6
PRKN-204ENST00000366896 NUTM2FA1L443 756 aa18.8■□□□□ 0.6
PRKN-204ENST00000366896 MTHFSP49914 203 aa18.8■□□□□ 0.6
PRKN-204ENST00000366896 CABP1Q9NZU7 370 aa18.8■□□□□ 0.6
PRKN-204ENST00000366896 PPIP5K1Q6PFW1 1433 aa18.8■□□□□ 0.6
PRKN-204ENST00000366896 ANKARQ7Z5J8 1434 aa18.8■□□□□ 0.6
PRKN-204ENST00000366896 RGPD8O14715 1765 aaPredicted RBP18.8■□□□□ 0.6
PRKN-204ENST00000366896 CD163L1Q9NR16 1453 aa18.8■□□□□ 0.6
PRKN-204ENST00000366896 ANKRD36BQ8N2N9 1353 aa18.79■□□□□ 0.6
PRKN-204ENST00000366896 C19orf44Q9H6X5 657 aa18.79■□□□□ 0.6
PRKN-204ENST00000366896 CFAP53Q96M91 514 aa18.79■□□□□ 0.6
PRKN-204ENST00000366896 TNNQ9UQP3 1299 aa18.79■□□□□ 0.6
PRKN-204ENST00000366896 ITSN1Q15811 1721 aa18.79■□□□□ 0.6
PRKN-204ENST00000366896 RARSP54136 660 aaKnown RBP18.78■□□□□ 0.6
PRKN-204ENST00000366896 RSPH6AQ9H0K4 717 aa18.78■□□□□ 0.6
PRKN-204ENST00000366896 A0A1W2PP64 1363 aa18.78■□□□□ 0.6
PRKN-204ENST00000366896 DCCP43146 1447 aa18.77■□□□□ 0.59
PRKN-204ENST00000366896 RLBP1P12271 317 aa18.76■□□□□ 0.59
PRKN-204ENST00000366896 BCL2L13Q9BXK5 485 aa18.76■□□□□ 0.59
PRKN-204ENST00000366896 LTBP4Q8N2S1 1624 aa18.76■□□□□ 0.59
PRKN-204ENST00000366896 USP19O94966 1318 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms