RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 SMC5Q8IY18 1101 aa11.4□□□□□ -0.59
SMYD3-201ENST00000366516 INO80Q9ULG1 1556 aaPredicted RBP11.39□□□□□ -0.59
SMYD3-201ENST00000366516 PKNOX2Q96KN3 472 aa11.39□□□□□ -0.59
SMYD3-201ENST00000366516 CARD14Q9BXL6 1004 aa11.39□□□□□ -0.59
SMYD3-201ENST00000366516 RLBP1P12271 317 aa11.38□□□□□ -0.59
SMYD3-201ENST00000366516 CCDC173Q0VFZ6 552 aa11.38□□□□□ -0.59
SMYD3-201ENST00000366516 GZF1Q9H116 711 aaPredicted RBP11.38□□□□□ -0.59
SMYD3-201ENST00000366516 ZC3H13Q5T200 1668 aaKnown RBP11.38□□□□□ -0.59
SMYD3-201ENST00000366516 IPO8O15397 1037 aaKnown RBP11.38□□□□□ -0.59
SMYD3-201ENST00000366516 DDIT3P35638 169 aa11.38□□□□□ -0.59
SMYD3-201ENST00000366516 PANK2Q9BZ23 570 aa11.38□□□□□ -0.59
SMYD3-201ENST00000366516 IL16Q14005 1332 aa11.37□□□□□ -0.59
SMYD3-201ENST00000366516 HSP90AB1P08238 724 aaKnown RBP11.37□□□□□ -0.59
SMYD3-201ENST00000366516 FANCAO15360 1455 aa11.37□□□□□ -0.59
SMYD3-201ENST00000366516 TERF1P54274 439 aa11.36□□□□□ -0.59
SMYD3-201ENST00000366516 FAM69CQ0P6D2 419 aa11.36□□□□□ -0.59
SMYD3-201ENST00000366516 RAB3GAP1Q15042 981 aa11.36□□□□□ -0.59
SMYD3-201ENST00000366516 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
SMYD3-201ENST00000366516 TRAPPC8Q9Y2L5 1435 aa11.36□□□□□ -0.59
SMYD3-201ENST00000366516 QRICH2Q9H0J4 1663 aa11.36□□□□□ -0.59
SMYD3-201ENST00000366516 UHRF1BP1LA0JNW5 1464 aa11.36□□□□□ -0.59
SMYD3-201ENST00000366516 ZNF428Q96B54 188 aa11.36□□□□□ -0.59
SMYD3-201ENST00000366516 ARXQ96QS3 562 aa11.36□□□□□ -0.59
SMYD3-201ENST00000366516 SMC4Q9NTJ3 1288 aa11.36□□□□□ -0.59
SMYD3-201ENST00000366516 ATP7AQ04656 1500 aa11.35□□□□□ -0.59
SMYD3-201ENST00000366516 EFCAB6Q5THR3 1501 aa11.35□□□□□ -0.59
SMYD3-201ENST00000366516 CFAP74Q9C0B2 1584 aa11.35□□□□□ -0.59
SMYD3-201ENST00000366516 NEUROD2Q15784 382 aa11.35□□□□□ -0.59
SMYD3-201ENST00000366516 ATF7IPQ6VMQ6 1270 aa11.35□□□□□ -0.59
SMYD3-201ENST00000366516 BMP2KLQ5H9B9 411 aa11.34□□□□□ -0.59
SMYD3-201ENST00000366516 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
SMYD3-201ENST00000366516 ADGRB3O60242 1522 aa11.34□□□□□ -0.59
SMYD3-201ENST00000366516 LMTK2Q8IWU2 1503 aa11.34□□□□□ -0.59
SMYD3-201ENST00000366516 HS1BP3Q53T59 392 aa11.34□□□□□ -0.59
SMYD3-201ENST00000366516 CFAP70Q5T0N1 1121 aa11.34□□□□□ -0.59
SMYD3-201ENST00000366516 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.34□□□□□ -0.59
SMYD3-201ENST00000366516 CLEC17AQ6ZS10 378 aa11.34□□□□□ -0.59
SMYD3-201ENST00000366516 ITPRIPQ8IWB1 547 aa11.34□□□□□ -0.59
SMYD3-201ENST00000366516 TNPO1Q92973 898 aaKnown RBP11.34□□□□□ -0.59
SMYD3-201ENST00000366516 MAP7D2Q96T17 732 aa11.34□□□□□ -0.59
SMYD3-201ENST00000366516 PDCL3Q9H2J4 239 aa11.34□□□□□ -0.59
SMYD3-201ENST00000366516 ANKRD36BQ8N2N9 1353 aa11.33□□□□□ -0.6
SMYD3-201ENST00000366516 ARHGAP31Q2M1Z3 1444 aa11.33□□□□□ -0.6
SMYD3-201ENST00000366516 BCL2L13Q9BXK5 485 aa11.33□□□□□ -0.6
SMYD3-201ENST00000366516 RRP7AQ9Y3A4 280 aaKnown RBP11.33□□□□□ -0.6
SMYD3-201ENST00000366516 ZCCHC11Q5TAX3 1644 aaKnown RBP11.33□□□□□ -0.6
SMYD3-201ENST00000366516 MSNP26038 577 aaKnown RBP11.32□□□□□ -0.6
SMYD3-201ENST00000366516 NUCB1Q02818 461 aa11.32□□□□□ -0.6
SMYD3-201ENST00000366516 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
SMYD3-201ENST00000366516 ALDH1L2Q3SY69 923 aa11.32□□□□□ -0.6
SMYD3-201ENST00000366516 GCC1Q96CN9 775 aa11.32□□□□□ -0.6
SMYD3-201ENST00000366516 PPP1R9BQ96SB3 815 aa11.32□□□□□ -0.6
SMYD3-201ENST00000366516 K7ELQ4 463 aaPredicted RBP11.32□□□□□ -0.6
SMYD3-201ENST00000366516 TRIM27P14373 513 aa11.32□□□□□ -0.6
SMYD3-201ENST00000366516 MTHFSP49914 203 aa11.32□□□□□ -0.6
SMYD3-201ENST00000366516 ZSCAN30Q86W11 494 aa11.32□□□□□ -0.6
SMYD3-201ENST00000366516 VSIG10Q8N0Z9 540 aa11.32□□□□□ -0.6
SMYD3-201ENST00000366516 NPM1P06748 294 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMYD3-201ENST00000366516 U2AF1L5P0DN76 240 aaPredicted RBP11.31□□□□□ -0.6
SMYD3-201ENST00000366516 NASPP49321 788 aaPredicted RBP11.31□□□□□ -0.6
SMYD3-201ENST00000366516 U2AF1Q01081 240 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMYD3-201ENST00000366516 KLHL40Q2TBA0 621 aa11.31□□□□□ -0.6
SMYD3-201ENST00000366516 RPGRIP1LQ68CZ1 1315 aa11.31□□□□□ -0.6
SMYD3-201ENST00000366516 NOS1P29475 1434 aa11.3□□□□□ -0.6
SMYD3-201ENST00000366516 CHD1LQ86WJ1 897 aa11.3□□□□□ -0.6
SMYD3-201ENST00000366516 ZBTB40Q9NUA8 1239 aa11.3□□□□□ -0.6
SMYD3-201ENST00000366516 EVC2Q86UK5 1308 aa11.3□□□□□ -0.6
SMYD3-201ENST00000366516 ADGRF5Q8IZF2 1346 aa11.3□□□□□ -0.6
SMYD3-201ENST00000366516 MED14O60244 1454 aa11.3□□□□□ -0.6
SMYD3-201ENST00000366516 MTERF4Q7Z6M4 381 aaKnown RBP11.29□□□□□ -0.6
SMYD3-201ENST00000366516 ATF5Q9Y2D1 282 aaPredicted RBP11.29□□□□□ -0.6
SMYD3-201ENST00000366516 MROH2AA6NES4 1674 aa11.29□□□□□ -0.6
SMYD3-201ENST00000366516 MROH1Q8NDA8 1641 aa11.29□□□□□ -0.6
SMYD3-201ENST00000366516 BRPF1P55201 1214 aaPredicted RBP11.29□□□□□ -0.6
SMYD3-201ENST00000366516 TNNQ9UQP3 1299 aa11.29□□□□□ -0.6
SMYD3-201ENST00000366516 ADGRB1O14514 1584 aa11.28□□□□□ -0.6
SMYD3-201ENST00000366516 PPLO60437 1756 aa11.28□□□□□ -0.6
SMYD3-201ENST00000366516 NUCB2P80303 420 aa11.28□□□□□ -0.6
SMYD3-201ENST00000366516 ZMYND15Q9H091 742 aa11.28□□□□□ -0.6
SMYD3-201ENST00000366516 ABCA9Q8IUA7 1624 aa11.28□□□□□ -0.6
SMYD3-201ENST00000366516 PPIP5K1Q6PFW1 1433 aa11.27□□□□□ -0.61
SMYD3-201ENST00000366516 ERBB4Q15303 1308 aa11.27□□□□□ -0.61
SMYD3-201ENST00000366516 OFD1O75665 1012 aa11.27□□□□□ -0.61
SMYD3-201ENST00000366516 MCM5P33992 734 aa11.27□□□□□ -0.61
SMYD3-201ENST00000366516 ZNF445P59923 1031 aa11.27□□□□□ -0.61
SMYD3-201ENST00000366516 CALD1Q05682 793 aaKnown RBP11.27□□□□□ -0.61
SMYD3-201ENST00000366516 EXOSC9Q06265 439 aaKnown RBP11.27□□□□□ -0.61
SMYD3-201ENST00000366516 SSH1Q8WYL5 1049 aa11.27□□□□□ -0.61
SMYD3-201ENST00000366516 C14orf93Q9H972 538 aaKnown RBP11.27□□□□□ -0.61
SMYD3-201ENST00000366516 PPRC1Q5VV67 1664 aaKnown RBP11.26□□□□□ -0.61
SMYD3-201ENST00000366516 TMPOP42166 694 aaKnown RBP11.26□□□□□ -0.61
SMYD3-201ENST00000366516 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
SMYD3-201ENST00000366516 CSPP1Q1MSJ5 1256 aa11.26□□□□□ -0.61
SMYD3-201ENST00000366516 ARHGAP45Q92619 1136 aa11.26□□□□□ -0.61
SMYD3-201ENST00000366516 NOB1Q9ULX3 412 aaKnown RBP11.26□□□□□ -0.61
SMYD3-201ENST00000366516 DDX49Q9Y6V7 483 aaKnown RBP11.26□□□□□ -0.61
SMYD3-201ENST00000366516 ANKRD26Q9UPS8 1709 aa11.26□□□□□ -0.61
SMYD3-201ENST00000366516 DIP2BQ9P265 1576 aa11.26□□□□□ -0.61
SMYD3-201ENST00000366516 YEATS2Q9ULM3 1422 aa11.26□□□□□ -0.61
SMYD3-201ENST00000366516 KIF3BO15066 747 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms