RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 TRIM67Q6ZTA4 783 aa6.97□□□□□ -1.29
RNU4-48P-201ENST00000365559 ZNF511Q8NB15 262 aa6.97□□□□□ -1.29
RNU4-48P-201ENST00000365559 WNT7BP56706 349 aa6.96□□□□□ -1.3
RNU4-48P-201ENST00000365559 FOXC1Q12948 553 aa6.96□□□□□ -1.3
RNU4-48P-201ENST00000365559 PKD2L1Q9P0L9 805 aa6.96□□□□□ -1.3
RNU4-48P-201ENST00000365559 FKBPLQ9UIM3 349 aa6.96□□□□□ -1.3
RNU4-48P-201ENST00000365559 SOCS7O14512 581 aa6.95□□□□□ -1.3
RNU4-48P-201ENST00000365559 RC3H1Q5TC82 1133 aaKnown RBP6.95□□□□□ -1.3
RNU4-48P-201ENST00000365559 ARMC2Q8NEN0 867 aa6.95□□□□□ -1.3
RNU4-48P-201ENST00000365559 FOXJ1Q92949 421 aa6.95□□□□□ -1.3
RNU4-48P-201ENST00000365559 TNFRSF10AO00220 468 aa6.94□□□□□ -1.3
RNU4-48P-201ENST00000365559 GDF9O60383 454 aa6.94□□□□□ -1.3
RNU4-48P-201ENST00000365559 GPR37L1O60883 481 aa6.94□□□□□ -1.3
RNU4-48P-201ENST00000365559 WNT7AO00755 349 aa6.93□□□□□ -1.3
RNU4-48P-201ENST00000365559 C4orf48Q5BLP8 95 aa6.93□□□□□ -1.3
RNU4-48P-201ENST00000365559 NBPF14Q5TI25 921 aa6.93□□□□□ -1.3
RNU4-48P-201ENST00000365559 MRGPRX2Q96LB1 330 aa6.93□□□□□ -1.3
RNU4-48P-201ENST00000365559 SH3BP5LQ7L8J4 393 aa6.92□□□□□ -1.3
RNU4-48P-201ENST00000365559 PDZRN3Q9UPQ7 1066 aa6.92□□□□□ -1.3
RNU4-48P-201ENST00000365559 TBC1D2BQ9UPU7 963 aa6.92□□□□□ -1.3
RNU4-48P-201ENST00000365559 NDUFB9Q9Y6M9 179 aa6.92□□□□□ -1.3
RNU4-48P-201ENST00000365559 PRR20EP86478 221 aa6.91□□□□□ -1.3
RNU4-48P-201ENST00000365559 PRR20CP86479 221 aa6.91□□□□□ -1.3
RNU4-48P-201ENST00000365559 PRR20DP86480 221 aa6.91□□□□□ -1.3
RNU4-48P-201ENST00000365559 PRR20BP86481 221 aa6.91□□□□□ -1.3
RNU4-48P-201ENST00000365559 PRR20AP86496 221 aa6.91□□□□□ -1.3
RNU4-48P-201ENST00000365559 AGERQ15109 404 aa6.91□□□□□ -1.3
RNU4-48P-201ENST00000365559 PDXDC2PQ6P474 469 aa6.91□□□□□ -1.3
RNU4-48P-201ENST00000365559 SH3RF1Q7Z6J0 888 aa6.91□□□□□ -1.3
RNU4-48P-201ENST00000365559 EHBP1Q8NDI1 1231 aa6.91□□□□□ -1.3
RNU4-48P-201ENST00000365559 GPKOWQ92917 476 aaPredicted RBP eCLIP6.91□□□□□ -1.3
RNU4-48P-201ENST00000365559 OCSTAMPQ9BR26 566 aa6.91□□□□□ -1.3
RNU4-48P-201ENST00000365559 ZC3H4Q9UPT8 1303 aaKnown RBP6.91□□□□□ -1.3
RNU4-48P-201ENST00000365559 MAGEB6P1A0A0J9YX57 407 aa6.9□□□□□ -1.3
RNU4-48P-201ENST00000365559 APBB1O00213 710 aa6.9□□□□□ -1.3
RNU4-48P-201ENST00000365559 FLIIQ13045 1269 aa6.9□□□□□ -1.3
RNU4-48P-201ENST00000365559 BPHLQ86WA6 291 aaPredicted RBP6.9□□□□□ -1.3
RNU4-48P-201ENST00000365559 PNMA1Q8ND90 353 aa6.9□□□□□ -1.3
RNU4-48P-201ENST00000365559 POM121Q96HA1 1249 aa6.9□□□□□ -1.3
RNU4-48P-201ENST00000365559 CARD14Q9BXL6 1004 aa6.9□□□□□ -1.3
RNU4-48P-201ENST00000365559 GDPD2Q9HCC8 539 aa6.9□□□□□ -1.3
RNU4-48P-201ENST00000365559 SIAH2O43255 324 aa6.89□□□□□ -1.31
RNU4-48P-201ENST00000365559 GFRA3O60609 400 aa6.89□□□□□ -1.31
RNU4-48P-201ENST00000365559 VARSP26640 1264 aaKnown RBP6.89□□□□□ -1.31
RNU4-48P-201ENST00000365559 ARHGAP9Q9BRR9 750 aa6.89□□□□□ -1.31
RNU4-48P-201ENST00000365559 TOR4AQ9NXH8 423 aa6.89□□□□□ -1.31
RNU4-48P-201ENST00000365559 PTK2Q05397 1052 aa6.88□□□□□ -1.31
RNU4-48P-201ENST00000365559 C1QTNF2Q9BXJ5 285 aa6.88□□□□□ -1.31
RNU4-48P-201ENST00000365559 IRX2Q9BZI1 471 aaPredicted RBP6.88□□□□□ -1.31
RNU4-48P-201ENST00000365559 COG6Q9Y2V7 657 aa6.88□□□□□ -1.31
RNU4-48P-201ENST00000365559 GTF3C3Q9Y5Q9 886 aa6.88□□□□□ -1.31
RNU4-48P-201ENST00000365559 TLL2Q9Y6L7 1015 aa6.88□□□□□ -1.31
RNU4-48P-201ENST00000365559 FBXO45P0C2W1 286 aa6.87□□□□□ -1.31
RNU4-48P-201ENST00000365559 IRF5Q13568 498 aa6.87□□□□□ -1.31
RNU4-48P-201ENST00000365559 ERFEQ4G0M1 354 aa6.87□□□□□ -1.31
RNU4-48P-201ENST00000365559 CYP4X1Q8N118 509 aa6.87□□□□□ -1.31
RNU4-48P-201ENST00000365559 SNIP1Q8TAD8 396 aaKnown RBP6.87□□□□□ -1.31
RNU4-48P-201ENST00000365559 FAM174AQ8TBP5 190 aa6.87□□□□□ -1.31
RNU4-48P-201ENST00000365559 GPSM3Q9Y4H4 160 aa6.87□□□□□ -1.31
RNU4-48P-201ENST00000365559 J3QL48 77 aa6.86□□□□□ -1.31
RNU4-48P-201ENST00000365559 NRG2O14511 850 aaPredicted RBP6.86□□□□□ -1.31
RNU4-48P-201ENST00000365559 UBTFP17480 764 aaKnown RBP6.86□□□□□ -1.31
RNU4-48P-201ENST00000365559 ABL2P42684 1182 aa6.86□□□□□ -1.31
RNU4-48P-201ENST00000365559 ZBTB33Q86T24 672 aa6.86□□□□□ -1.31
RNU4-48P-201ENST00000365559 ADAM32Q8TC27 787 aa6.86□□□□□ -1.31
RNU4-48P-201ENST00000365559 PRM3Q9NNZ6 103 aa6.86□□□□□ -1.31
RNU4-48P-201ENST00000365559 TTC24A2A3L6 582 aaPredicted RBP6.85□□□□□ -1.31
RNU4-48P-201ENST00000365559 ZBBXA8MT70 800 aa6.85□□□□□ -1.31
RNU4-48P-201ENST00000365559 ALDH1A1P00352 501 aa6.85□□□□□ -1.31
RNU4-48P-201ENST00000365559 SMPD1P17405 629 aa6.84□□□□□ -1.31
RNU4-48P-201ENST00000365559 NR1H3Q13133 447 aa6.84□□□□□ -1.31
RNU4-48P-201ENST00000365559 ARID5BQ14865 1188 aa6.84□□□□□ -1.31
RNU4-48P-201ENST00000365559 TRMT44Q8IYL2 757 aaKnown RBP6.84□□□□□ -1.31
RNU4-48P-201ENST00000365559 CLUAP1Q96AJ1 413 aa6.84□□□□□ -1.31
RNU4-48P-201ENST00000365559 FAM187AA6NFU0 413 aa6.83□□□□□ -1.32
RNU4-48P-201ENST00000365559 LAPTM4AQ15012 233 aa6.83□□□□□ -1.32
RNU4-48P-201ENST00000365559 MPNDQ8N594 471 aa6.83□□□□□ -1.32
RNU4-48P-201ENST00000365559 CDK15Q96Q40 435 aa6.83□□□□□ -1.32
RNU4-48P-201ENST00000365559 RAD21O60216 631 aa6.82□□□□□ -1.32
RNU4-48P-201ENST00000365559 ADH1CP00326 375 aa6.82□□□□□ -1.32
RNU4-48P-201ENST00000365559 GRM5P41594 1212 aa6.82□□□□□ -1.32
RNU4-48P-201ENST00000365559 VAC14Q08AM6 782 aa6.82□□□□□ -1.32
RNU4-48P-201ENST00000365559 SLC10A4Q96EP9 437 aa6.82□□□□□ -1.32
RNU4-48P-201ENST00000365559 VASH1Q7L8A9 365 aaPredicted RBP6.81□□□□□ -1.32
RNU4-48P-201ENST00000365559 DZIP3Q86Y13 1208 aaKnown RBP6.81□□□□□ -1.32
RNU4-48P-201ENST00000365559 HPS1Q92902 700 aa6.81□□□□□ -1.32
RNU4-48P-201ENST00000365559 MAP4K5Q9Y4K4 846 aa6.81□□□□□ -1.32
RNU4-48P-201ENST00000365559 PCDHB9Q9Y5E1 797 aa6.81□□□□□ -1.32
RNU4-48P-201ENST00000365559 WASF2Q9Y6W5 498 aa6.81□□□□□ -1.32
RNU4-48P-201ENST00000365559 DGAT1O75907 488 aa6.8□□□□□ -1.32
RNU4-48P-201ENST00000365559 PKDCCQ504Y2 493 aa6.8□□□□□ -1.32
RNU4-48P-201ENST00000365559 NR3C2P08235 984 aa6.79□□□□□ -1.32
RNU4-48P-201ENST00000365559 FSHRP23945 695 aa6.79□□□□□ -1.32
RNU4-48P-201ENST00000365559 NNTQ13423 1086 aa6.79□□□□□ -1.32
RNU4-48P-201ENST00000365559 KCTD15Q96SI1 283 aaPredicted RBP6.79□□□□□ -1.32
RNU4-48P-201ENST00000365559 LCE2BO14633 110 aa6.78□□□□□ -1.32
RNU4-48P-201ENST00000365559 WASHC4Q2M389 1173 aa6.78□□□□□ -1.32
RNU4-48P-201ENST00000365559 Q6ZNB5 142 aa6.78□□□□□ -1.32
RNU4-48P-201ENST00000365559 PROSER2Q86WR7 435 aaPredicted RBP6.78□□□□□ -1.32
RNU4-48P-201ENST00000365559 FNBP4Q8N3X1 1017 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms