RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 SPECC1LQ69YQ0 1117 aa9.94□□□□□ -0.82
NCKAP1-202ENST00000361354 G3BP1Q13283 466 aaKnown RBP eCLIP9.93□□□□□ -0.824e-8■■□□□ 12.1
NCKAP1-202ENST00000361354 UBXN4Q92575 508 aa9.93□□□□□ -0.82
NCKAP1-202ENST00000361354 TAF4BQ92750 862 aa9.93□□□□□ -0.82
NCKAP1-202ENST00000361354 NAP1L3Q99457 506 aaPredicted RBP9.93□□□□□ -0.82
NCKAP1-202ENST00000361354 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.93□□□□□ -0.82
NCKAP1-202ENST00000361354 V9GYY5 206 aaPredicted RBP9.93□□□□□ -0.82
NCKAP1-202ENST00000361354 BMS1Q14692 1282 aaKnown RBP9.93□□□□□ -0.82
NCKAP1-202ENST00000361354 AAMPQ13685 434 aa9.93□□□□□ -0.82
NCKAP1-202ENST00000361354 TTC5Q8N0Z6 440 aa9.93□□□□□ -0.82
NCKAP1-202ENST00000361354 TRAK2O60296 914 aa9.93□□□□□ -0.82
NCKAP1-202ENST00000361354 IMMTQ16891 758 aaKnown RBP9.93□□□□□ -0.82
NCKAP1-202ENST00000361354 KIAA1328Q86T90 577 aa9.93□□□□□ -0.82
NCKAP1-202ENST00000361354 MYBBP1AQ9BQG0 1328 aaKnown RBP9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 EPB41L2O43491 1005 aaKnown RBP9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 CETN2P41208 172 aa9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 DZIP1LQ8IYY4 767 aaKnown RBP9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 BAZ1BQ9UIG0 1483 aaKnown RBP9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 KIF3CO14782 793 aa9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 IFFO1Q0D2I5 559 aa9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 ARHGAP29Q52LW3 1261 aa9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 FMNL2Q96PY5 1086 aa9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 CCDC113Q9H0I3 377 aa9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 TANGO6Q9C0B7 1094 aa9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 EIF4G1Q04637 1599 aaKnown RBP9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 TNMDQ9H2S6 317 aa9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 POTEJP0CG39 1038 aa9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 CNTROBQ8N137 903 aa9.92□□□□□ -0.82
NCKAP1-202ENST00000361354 CGNQ9P2M7 1197 aaKnown RBP9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 SLC3A2P08195 630 aaKnown RBP9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 RNF187Q5TA31 235 aaPredicted RBP9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 GSTTP1A0A1W2PQM5 241 aa9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 DDX58O95786 925 aaKnown RBP9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 FAM177A1Q8N128 213 aaPredicted RBP9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 IKQ13123 557 aaPredicted RBP9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 ERC1Q8IUD2 1116 aa9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 FERP16591 822 aa9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 HOOK3Q86VS8 718 aa9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 DDX46Q7L014 1031 aaKnown RBP9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 SWAP70Q9UH65 585 aa9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 STK38Q15208 465 aa9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 SOGA3Q5TF21 947 aa9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 MNAT1P51948 309 aa9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 DNAI2Q9GZS0 605 aa9.91□□□□□ -0.82
NCKAP1-202ENST00000361354 NOL3O60936 208 aaKnown RBP9.9□□□□□ -0.82
NCKAP1-202ENST00000361354 ZNF397Q8NF99 534 aaPredicted RBP9.9□□□□□ -0.82
NCKAP1-202ENST00000361354 CDC45O75419 566 aa9.9□□□□□ -0.82
NCKAP1-202ENST00000361354 BRPF3Q9ULD4 1205 aa9.9□□□□□ -0.82
NCKAP1-202ENST00000361354 FIBPO43427 364 aa9.9□□□□□ -0.82
NCKAP1-202ENST00000361354 TNIKQ9UKE5 1360 aa9.9□□□□□ -0.82
NCKAP1-202ENST00000361354 HIP1O00291 1037 aa9.9□□□□□ -0.82
NCKAP1-202ENST00000361354 CPSF2Q9P2I0 782 aaKnown RBP9.9□□□□□ -0.83
NCKAP1-202ENST00000361354 TIGD1Q96MW7 591 aa9.89□□□□□ -0.83
NCKAP1-202ENST00000361354 WASHC2AQ641Q2 1341 aa9.89□□□□□ -0.83
NCKAP1-202ENST00000361354 SSR1P43307 286 aaKnown RBP9.89□□□□□ -0.83
NCKAP1-202ENST00000361354 CCDC27Q2M243 656 aa9.89□□□□□ -0.83
NCKAP1-202ENST00000361354 TNNT1P13805 278 aa9.89□□□□□ -0.83
NCKAP1-202ENST00000361354 GTF2A1P52655 376 aaPredicted RBP9.89□□□□□ -0.83
NCKAP1-202ENST00000361354 UBE4AQ14139 1066 aa9.89□□□□□ -0.83
NCKAP1-202ENST00000361354 POTEB2H3BUK9 544 aa9.89□□□□□ -0.83
NCKAP1-202ENST00000361354 IRX3P78415 501 aaPredicted RBP9.89□□□□□ -0.83
NCKAP1-202ENST00000361354 SAMD1Q6SPF0 538 aaPredicted RBP9.89□□□□□ -0.83
NCKAP1-202ENST00000361354 UACAQ9BZF9 1416 aa9.88□□□□□ -0.83
NCKAP1-202ENST00000361354 API5Q9BZZ5 524 aaKnown RBP9.88□□□□□ -0.83
NCKAP1-202ENST00000361354 CRBNQ96SW2 442 aa9.88□□□□□ -0.83
NCKAP1-202ENST00000361354 DNAJC2Q99543 621 aaKnown RBP9.88□□□□□ -0.83
NCKAP1-202ENST00000361354 CEP57L1Q8IYX8 460 aa9.88□□□□□ -0.83
NCKAP1-202ENST00000361354 TAOK3Q9H2K8 898 aa9.88□□□□□ -0.83
NCKAP1-202ENST00000361354 SREK1Q8WXA9 508 aaKnown RBP9.88□□□□□ -0.83
NCKAP1-202ENST00000361354 TEFQ10587 303 aa9.88□□□□□ -0.83
NCKAP1-202ENST00000361354 IBSPP21815 317 aaPredicted RBP9.88□□□□□ -0.83
NCKAP1-202ENST00000361354 PPP1R12BO60237 982 aaPredicted RBP9.88□□□□□ -0.83
NCKAP1-202ENST00000361354 BCL2L13Q9BXK5 485 aa9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 CCDC160A6NGH7 325 aa9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 DNAAF4Q8WXU2 420 aa9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 ME1P48163 572 aa9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 BBXQ8WY36 941 aaPredicted RBP9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 GRPEL1Q9HAV7 217 aa9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 PUS7Q96PZ0 661 aaKnown RBP9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 ANKRD1Q15327 319 aa9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 WASHC4Q2M389 1173 aa9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 ZSCAN12O43309 604 aa9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 VPS36Q86VN1 386 aa9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 HSPA4P34932 840 aa9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 NGEFQ8N5V2 710 aa9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 GOPCQ9HD26 462 aa9.87□□□□□ -0.83
NCKAP1-202ENST00000361354 CEP83Q9Y592 693 aa9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 TMCO5BA8MYB1 307 aa9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 NGDNQ8NEJ9 315 aaKnown RBP9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 KIF18AQ8NI77 898 aa9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 FSD2A1L4K1 749 aa9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 ESPNB1AK53 854 aa9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 COMMD10Q9Y6G5 202 aa9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 KIF5CO60282 957 aa9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 KRT85P78386 507 aa9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 FBF1Q8TES7 1133 aa9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 SMTNL1A8MU46 457 aa9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 FILIP1Q7Z7B0 1213 aa9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 TRIM22Q8IYM9 498 aa9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 COG6Q9Y2V7 657 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms