RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 ZRSR1Q15695 479 aaKnown RBP8.76□□□□□ -1.01
RAB5B-201ENST00000360299 DDB1Q16531 1140 aa8.76□□□□□ -1.01
RAB5B-201ENST00000360299 AK7Q96M32 723 aa8.76□□□□□ -1.01
RAB5B-201ENST00000360299 TMEM94Q12767 1356 aa8.76□□□□□ -1.01
RAB5B-201ENST00000360299 RBM19Q9Y4C8 960 aaKnown RBP8.76□□□□□ -1.01
RAB5B-201ENST00000360299 NPHP4O75161 1426 aaPredicted RBP8.76□□□□□ -1.01
RAB5B-201ENST00000360299 GNAI1P63096 354 aa8.76□□□□□ -1.01
RAB5B-201ENST00000360299 API5Q9BZZ5 524 aaKnown RBP8.76□□□□□ -1.01
RAB5B-201ENST00000360299 ATP7AQ04656 1500 aa8.76□□□□□ -1.01
RAB5B-201ENST00000360299 DUOX2Q9NRD8 1548 aa8.76□□□□□ -1.01
RAB5B-201ENST00000360299 ATAD2Q6PL18 1390 aa8.75□□□□□ -1.01
RAB5B-201ENST00000360299 ORAI2Q96SN7 254 aa8.75□□□□□ -1.01
RAB5B-201ENST00000360299 TMOD3Q9NYL9 352 aa8.75□□□□□ -1.01
RAB5B-201ENST00000360299 CCDC184Q52MB2 194 aa8.75□□□□□ -1.01
RAB5B-201ENST00000360299 MTHFSP49914 203 aa8.75□□□□□ -1.01
RAB5B-201ENST00000360299 RIPK4P57078 832 aa8.75□□□□□ -1.01
RAB5B-201ENST00000360299 AIMP1Q12904 312 aaKnown RBP8.75□□□□□ -1.01
RAB5B-201ENST00000360299 USHBP1Q8N6Y0 703 aa8.75□□□□□ -1.01
RAB5B-201ENST00000360299 PTMSP20962 102 aa8.74□□□□□ -1.01
RAB5B-201ENST00000360299 LTKP29376 864 aa8.74□□□□□ -1.01
RAB5B-201ENST00000360299 ZNF219Q9P2Y4 722 aaPredicted RBP8.74□□□□□ -1.01
RAB5B-201ENST00000360299 DDX19BQ9UMR2 479 aa8.74□□□□□ -1.01
RAB5B-201ENST00000360299 CLUAP1Q96AJ1 413 aa8.74□□□□□ -1.01
RAB5B-201ENST00000360299 SPATA31E1Q6ZUB1 1445 aa8.74□□□□□ -1.01
RAB5B-201ENST00000360299 KDM4FA0A1W2PPD8 638 aa8.74□□□□□ -1.01
RAB5B-201ENST00000360299 HSPA1LP34931 641 aa8.74□□□□□ -1.01
RAB5B-201ENST00000360299 ZRANB1Q9UGI0 708 aa8.74□□□□□ -1.01
RAB5B-201ENST00000360299 MBD5Q9P267 1494 aa8.74□□□□□ -1.01
RAB5B-201ENST00000360299 TRIM44Q96DX7 344 aaPredicted RBP8.74□□□□□ -1.01
RAB5B-201ENST00000360299 KIF16BQ96L93 1317 aa8.74□□□□□ -1.01
RAB5B-201ENST00000360299 APBA3O96018 575 aa8.73□□□□□ -1.01
RAB5B-201ENST00000360299 PPP2R1AP30153 589 aa8.73□□□□□ -1.01
RAB5B-201ENST00000360299 CDC42BPBQ9Y5S2 1711 aa8.73□□□□□ -1.01
RAB5B-201ENST00000360299 ZPR1O75312 459 aa8.73□□□□□ -1.01
RAB5B-201ENST00000360299 CLASP1Q7Z460 1538 aa8.73□□□□□ -1.01
RAB5B-201ENST00000360299 TULP1O00294 542 aaPredicted RBP8.73□□□□□ -1.01
RAB5B-201ENST00000360299 PTCD1O75127 700 aaKnown RBP8.73□□□□□ -1.01
RAB5B-201ENST00000360299 KIF6Q6ZMV9 814 aa8.73□□□□□ -1.01
RAB5B-201ENST00000360299 STK32BQ9NY57 414 aa8.73□□□□□ -1.01
RAB5B-201ENST00000360299 SAMD9LQ8IVG5 1584 aa8.73□□□□□ -1.01
RAB5B-201ENST00000360299 APBB1O00213 710 aa8.73□□□□□ -1.01
RAB5B-201ENST00000360299 NEXNQ0ZGT2 675 aa8.73□□□□□ -1.01
RAB5B-201ENST00000360299 C16orf71Q8IYS4 520 aaPredicted RBP8.73□□□□□ -1.01
RAB5B-201ENST00000360299 TFCP2L1Q9NZI6 479 aa8.73□□□□□ -1.01
RAB5B-201ENST00000360299 TRPC5Q9UL62 973 aaPredicted RBP8.73□□□□□ -1.01
RAB5B-201ENST00000360299 ACEP12821 1306 aa8.73□□□□□ -1.01
RAB5B-201ENST00000360299 FBXO41Q8TF61 875 aa8.72□□□□□ -1.01
RAB5B-201ENST00000360299 MAGI2Q86UL8 1455 aa8.72□□□□□ -1.01
RAB5B-201ENST00000360299 VPS37DQ86XT2 251 aa8.72□□□□□ -1.01
RAB5B-201ENST00000360299 NME9Q86XW9 330 aa8.71□□□□□ -1.01
RAB5B-201ENST00000360299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.71□□□□□ -1.01
RAB5B-201ENST00000360299 NCBP3Q53F19 620 aaKnown RBP8.71□□□□□ -1.01
RAB5B-201ENST00000360299 TSPYL4Q9UJ04 414 aa8.71□□□□□ -1.01
RAB5B-201ENST00000360299 TMEM2Q9UHN6 1383 aa8.71□□□□□ -1.02
RAB5B-201ENST00000360299 BCORL1Q5H9F3 1711 aa8.71□□□□□ -1.02
RAB5B-201ENST00000360299 SULT6B1Q6IMI4 303 aa8.71□□□□□ -1.02
RAB5B-201ENST00000360299 DZIP1LQ8IYY4 767 aaKnown RBP8.71□□□□□ -1.02
RAB5B-201ENST00000360299 CWC22Q9HCG8 908 aaKnown RBP8.71□□□□□ -1.02
RAB5B-201ENST00000360299 ADAMTS8Q9UP79 889 aa8.71□□□□□ -1.02
RAB5B-201ENST00000360299 SHROOM2Q13796 1616 aa8.71□□□□□ -1.02
RAB5B-201ENST00000360299 TTC37Q6PGP7 1564 aa8.71□□□□□ -1.02
RAB5B-201ENST00000360299 SHANK2Q9UPX8 1470 aa8.71□□□□□ -1.02
RAB5B-201ENST00000360299 CT47B1P0C2W7 299 aaPredicted RBP8.7□□□□□ -1.02
RAB5B-201ENST00000360299 DDX58O95786 925 aaKnown RBP8.7□□□□□ -1.02
RAB5B-201ENST00000360299 GAS2L2Q8NHY3 880 aa8.7□□□□□ -1.02
RAB5B-201ENST00000360299 PREX2Q70Z35 1606 aa8.7□□□□□ -1.02
RAB5B-201ENST00000360299 ANKRD24Q8TF21 1146 aa8.69□□□□□ -1.02
RAB5B-201ENST00000360299 PNISRQ8TF01 805 aaKnown RBP8.69□□□□□ -1.02
RAB5B-201ENST00000360299 TRIM34Q9BYJ4 488 aa8.69□□□□□ -1.02
RAB5B-201ENST00000360299 C14orf93Q9H972 538 aaKnown RBP8.69□□□□□ -1.02
RAB5B-201ENST00000360299 POLR1AO95602 1720 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-201ENST00000360299 GOLGA6L4A6NEF3 574 aa8.69□□□□□ -1.02
RAB5B-201ENST00000360299 RIC3Q7Z5B4 369 aa8.69□□□□□ -1.02
RAB5B-201ENST00000360299 TCP11L2Q8N4U5 519 aa8.69□□□□□ -1.02
RAB5B-201ENST00000360299 GBP4Q96PP9 640 aa8.69□□□□□ -1.02
RAB5B-201ENST00000360299 ARHGEF5Q12774 1597 aa8.69□□□□□ -1.02
RAB5B-201ENST00000360299 GPR162Q16538 588 aa8.68□□□□□ -1.02
RAB5B-201ENST00000360299 EXOC6Q8TAG9 804 aa8.68□□□□□ -1.02
RAB5B-201ENST00000360299 CRBNQ96SW2 442 aa8.68□□□□□ -1.02
RAB5B-201ENST00000360299 UGGT1Q9NYU2 1555 aa8.68□□□□□ -1.02
RAB5B-201ENST00000360299 GRM1Q13255 1194 aa8.68□□□□□ -1.02
RAB5B-201ENST00000360299 FAM161AQ3B820 660 aa8.68□□□□□ -1.02
RAB5B-201ENST00000360299 ZNF428Q96B54 188 aa8.68□□□□□ -1.02
RAB5B-201ENST00000360299 RFC4P35249 363 aa8.68□□□□□ -1.02
RAB5B-201ENST00000360299 CHMP4CQ96CF2 233 aa8.68□□□□□ -1.02
RAB5B-201ENST00000360299 COG6Q9Y2V7 657 aa8.68□□□□□ -1.02
RAB5B-201ENST00000360299 KDM5DQ9BY66 1539 aa8.68□□□□□ -1.02
RAB5B-201ENST00000360299 WDR63Q8IWG1 891 aa8.67□□□□□ -1.02
RAB5B-201ENST00000360299 KDM5CP41229 1560 aa8.67□□□□□ -1.02
RAB5B-201ENST00000360299 IPO9Q96P70 1041 aaKnown RBP8.67□□□□□ -1.02
RAB5B-201ENST00000360299 HTATSF1O43719 755 aaKnown RBP8.67□□□□□ -1.02
RAB5B-201ENST00000360299 STARD3NLO95772 234 aa8.67□□□□□ -1.02
RAB5B-201ENST00000360299 TRIM6-TRIM34B2RNG4 842 aa8.67□□□□□ -1.02
RAB5B-201ENST00000360299 CDK11BP21127 795 aaKnown RBP8.67□□□□□ -1.02
RAB5B-201ENST00000360299 LRRFIP1Q32MZ4 808 aaKnown RBP8.67□□□□□ -1.02
RAB5B-201ENST00000360299 BCL2L13Q9BXK5 485 aa8.67□□□□□ -1.02
RAB5B-201ENST00000360299 HSP90AB4PQ58FF6 505 aa8.66□□□□□ -1.02
RAB5B-201ENST00000360299 ILDR1Q86SU0 546 aaPredicted RBP8.66□□□□□ -1.02
RAB5B-201ENST00000360299 C9orf78Q9NZ63 289 aaPredicted RBP8.66□□□□□ -1.02
RAB5B-201ENST00000360299 PTPRMP28827 1452 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms