RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 UBXN4Q92575 508 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 CCDC94Q9BW85 323 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-203ENST00000357395 CDK5RAP3Q96JB5 506 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 MYO1BO43795 1136 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 TMCO3Q6UWJ1 677 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 ARMC9Q7Z3E5 817 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 DZIP1LQ8IYY4 767 aaKnown RBP5.53□□□□□ -1.52
SYNE2-203ENST00000357395 LRRCC1Q9C099 1032 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 DHX37Q8IY37 1157 aaKnown RBP5.53□□□□□ -1.52
SYNE2-203ENST00000357395 GRPEL1Q9HAV7 217 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 FMN1Q68DA7 1419 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 CCDC171Q6TFL3 1326 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 TNNT1P13805 278 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 GOLGA2Q08379 1002 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 CLUL1Q15846 466 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 HDGFP51858 240 aaKnown RBP5.53□□□□□ -1.52
SYNE2-203ENST00000357395 OFD1O75665 1012 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 MNAT1P51948 309 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 B4GALNT4Q76KP1 1039 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 RMDN2Q96LZ7 410 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 TSPY26PQ9H489 355 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 NDC80O14777 642 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 ZMAT2Q96NC0 199 aaKnown RBP5.52□□□□□ -1.53
SYNE2-203ENST00000357395 SLC8A1P32418 973 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 CCDC40Q4G0X9 1142 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 CCDC148Q8NFR7 591 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 DNAJC8O75937 253 aaPredicted RBP5.52□□□□□ -1.53
SYNE2-203ENST00000357395 ARHGAP25P42331 645 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 CLASRPQ8N2M8 674 aaKnown RBP5.52□□□□□ -1.53
SYNE2-203ENST00000357395 TTC14Q96N46 770 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 FAM184BQ9ULE4 1060 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 MYBBP1AQ9BQG0 1328 aaKnown RBP5.52□□□□□ -1.53
SYNE2-203ENST00000357395 TXLNAP40222 546 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 GCOM1H8Y6P7 765 aaPredicted RBP5.52□□□□□ -1.53
SYNE2-203ENST00000357395 MYZAPP0CAP1 466 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 PSMD7P51665 324 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 ERC1Q8IUD2 1116 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 MYCBPQ99417 103 aaPredicted RBP5.52□□□□□ -1.53
SYNE2-203ENST00000357395 TDO2P48775 406 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 RAD50Q92878 1312 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 TMED1Q13445 227 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 RPAP2Q8IXW5 612 aaPredicted RBP5.52□□□□□ -1.53
SYNE2-203ENST00000357395 CLIP2Q9UDT6 1046 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 R3HCC1Q9Y3T6 440 aaKnown RBP5.52□□□□□ -1.53
SYNE2-203ENST00000357395 CCDC73Q6ZRK6 1079 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 NAA15Q9BXJ9 866 aaKnown RBP5.52□□□□□ -1.53
SYNE2-203ENST00000357395 LIMCH1Q9UPQ0 1083 aa5.52□□□□□ -1.53
SYNE2-203ENST00000357395 GFM2Q969S9 779 aaKnown RBP5.51□□□□□ -1.53
SYNE2-203ENST00000357395 SEC62Q99442 399 aaKnown RBP5.51□□□□□ -1.53
SYNE2-203ENST00000357395 SYCP1Q15431 976 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 CARD11Q9BXL7 1154 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 DAAM2Q86T65 1068 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 APLFQ8IW19 511 aaPredicted RBP5.51□□□□□ -1.53
SYNE2-203ENST00000357395 CCDC30Q5VVM6 783 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 CFAP45Q9UL16 551 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 POLA1P09884 1462 aaPredicted RBP5.51□□□□□ -1.53
SYNE2-203ENST00000357395 ISM2Q6H9L7 571 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 RB1CC1Q8TDY2 1594 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 FILIP1LQ4L180 1135 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 AEBP2Q6ZN18 517 aaPredicted RBP5.51□□□□□ -1.53
SYNE2-203ENST00000357395 RRBP1Q9P2E9 1410 aaKnown RBP5.51□□□□□ -1.53
SYNE2-203ENST00000357395 RTF1Q92541 710 aaKnown RBP5.51□□□□□ -1.53
SYNE2-203ENST00000357395 CRACR2AQ9BSW2 395 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 PPP6R1Q9UPN7 881 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 ZSCAN12O43309 604 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 SKILP12757 684 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 EIF5P55010 431 aaKnown RBP5.51□□□□□ -1.53
SYNE2-203ENST00000357395 OS9Q13438 667 aaPredicted RBP5.51□□□□□ -1.53
SYNE2-203ENST00000357395 TRAK2O60296 914 aa5.51□□□□□ -1.53
SYNE2-203ENST00000357395 WDR33Q9C0J8 1336 aaKnown RBP5.51□□□□□ -1.53
SYNE2-203ENST00000357395 RRP1P56182 461 aaKnown RBP5.5□□□□□ -1.53
SYNE2-203ENST00000357395 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.5□□□□□ -1.53
SYNE2-203ENST00000357395 ZFYP08048 801 aaPredicted RBP5.5□□□□□ -1.53
SYNE2-203ENST00000357395 HSPA4P34932 840 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 SF3A1Q15459 793 aaKnown RBP5.5□□□□□ -1.53
SYNE2-203ENST00000357395 CCDC6Q16204 474 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 GDAP1L1Q96MZ0 367 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 PPP1R15AO75807 674 aaPredicted RBP5.5□□□□□ -1.53
SYNE2-203ENST00000357395 HMGB2P26583 209 aaKnown RBP5.5□□□□□ -1.53
SYNE2-203ENST00000357395 CNGA1P29973 690 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 H3BQV1 296 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 IFFO2Q5TF58 517 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 ENOX2Q16206 610 aaKnown RBP5.5□□□□□ -1.53
SYNE2-203ENST00000357395 A0A1B0GUL7 405 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 IFFO1Q0D2I5 559 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 LMOD2Q6P5Q4 547 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 SRCIN1Q9C0H9 1055 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 USP25Q9UHP3 1055 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 PIP4K2BP78356 416 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 DTNBP1Q96EV8 351 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 CCDC196A0A1B0GTZ2 297 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 RABGAP1Q9Y3P9 1069 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 TRIM29Q14134 588 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 IPO4Q8TEX9 1081 aaKnown RBP5.5□□□□□ -1.53
SYNE2-203ENST00000357395 OLFM4Q6UX06 510 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 KDM2AQ9Y2K7 1162 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 OGFRQ9NZT2 677 aa5.5□□□□□ -1.53
SYNE2-203ENST00000357395 CKAP4Q07065 602 aaKnown RBP5.49□□□□□ -1.53
SYNE2-203ENST00000357395 STAMBPO95630 424 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 TAOK3Q9H2K8 898 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms