RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
SREBF1-202ENST00000355815 NKTRP30414 1462 aaKnown RBP17.31■□□□□ 0.36
SREBF1-202ENST00000355815 KIF16BQ96L93 1317 aa17.31■□□□□ 0.36
SREBF1-202ENST00000355815 MRE11P49959 708 aa17.3■□□□□ 0.36
SREBF1-202ENST00000355815 ABCC10Q5T3U5 1492 aa17.3■□□□□ 0.36
SREBF1-202ENST00000355815 FYB1O15117 783 aa17.3■□□□□ 0.36
SREBF1-202ENST00000355815 HAP1P54257 671 aaPredicted RBP17.3■□□□□ 0.36
SREBF1-202ENST00000355815 CEBPAP49715 358 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-202ENST00000355815 NLRP6P59044 892 aa17.29■□□□□ 0.36
SREBF1-202ENST00000355815 PDE4CQ08493 712 aa17.29■□□□□ 0.36
SREBF1-202ENST00000355815 FKBP5Q13451 457 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-202ENST00000355815 MCM10Q7L590 875 aa17.29■□□□□ 0.36
SREBF1-202ENST00000355815 TSPYL4Q9UJ04 414 aa17.28■□□□□ 0.36
SREBF1-202ENST00000355815 CCDC9Q9Y3X0 531 aaKnown RBP17.28■□□□□ 0.36
SREBF1-202ENST00000355815 NRDCO43847 1150 aa17.28■□□□□ 0.36
SREBF1-202ENST00000355815 ZNF592Q92610 1267 aa17.28■□□□□ 0.36
SREBF1-202ENST00000355815 C8orf34Q49A92 452 aa17.27■□□□□ 0.36
SREBF1-202ENST00000355815 CHMP3Q9Y3E7 222 aa17.27■□□□□ 0.36
SREBF1-202ENST00000355815 GPRASP1Q5JY77 1395 aa17.27■□□□□ 0.36
SREBF1-202ENST00000355815 LRRIQ1Q96JM4 1722 aa17.27■□□□□ 0.36
SREBF1-202ENST00000355815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-202ENST00000355815 PTMSP20962 102 aa17.27■□□□□ 0.36
SREBF1-202ENST00000355815 NASPP49321 788 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-202ENST00000355815 ZNF330Q9Y3S2 320 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-202ENST00000355815 COL17A1Q9UMD9 1497 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-202ENST00000355815 SYAP1Q96A49 352 aaPredicted RBP17.27■□□□□ 0.35
SREBF1-202ENST00000355815 ASXL2Q76L83 1435 aa17.26■□□□□ 0.35
SREBF1-202ENST00000355815 MCCP23508 829 aa17.26■□□□□ 0.35
SREBF1-202ENST00000355815 DUOX2Q9NRD8 1548 aa17.26■□□□□ 0.35
SREBF1-202ENST00000355815 NUDT16Q96DE0 195 aaKnown RBP17.26■□□□□ 0.35
SREBF1-202ENST00000355815 PLA2R1Q13018 1463 aa17.26■□□□□ 0.35
SREBF1-202ENST00000355815 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-202ENST00000355815 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
SREBF1-202ENST00000355815 GOLGA6L6A8MZA4 724 aa17.25■□□□□ 0.35
SREBF1-202ENST00000355815 MCTP1Q6DN14 999 aa17.25■□□□□ 0.35
SREBF1-202ENST00000355815 KIAA1211Q6ZU35 1233 aa17.25■□□□□ 0.35
SREBF1-202ENST00000355815 ARHGEF12Q9NZN5 1544 aa17.25■□□□□ 0.35
SREBF1-202ENST00000355815 RPGRIP1LQ68CZ1 1315 aa17.25■□□□□ 0.35
SREBF1-202ENST00000355815 API5Q9BZZ5 524 aaKnown RBP17.24■□□□□ 0.35
SREBF1-202ENST00000355815 PRDM10Q9NQV6 1147 aa17.24■□□□□ 0.35
SREBF1-202ENST00000355815 ESPNB1AK53 854 aa17.24■□□□□ 0.35
SREBF1-202ENST00000355815 SLC4A2P04920 1241 aa17.24■□□□□ 0.35
SREBF1-202ENST00000355815 MAGI2Q86UL8 1455 aa17.24■□□□□ 0.35
SREBF1-202ENST00000355815 RTEL1-TNFRSF6BF6WH68 1400 aa17.23■□□□□ 0.35
SREBF1-202ENST00000355815 HMMRO75330 724 aa17.23■□□□□ 0.35
SREBF1-202ENST00000355815 BCORL1Q5H9F3 1711 aa17.23■□□□□ 0.35
SREBF1-202ENST00000355815 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-202ENST00000355815 ASXL1Q8IXJ9 1541 aa17.22■□□□□ 0.35
SREBF1-202ENST00000355815 CSB-PGBD3P0DP91 1061 aa17.22■□□□□ 0.35
SREBF1-202ENST00000355815 SKOR2Q2VWA4 1001 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-202ENST00000355815 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.22■□□□□ 0.35
SREBF1-202ENST00000355815 FCHSD2O94868 740 aa17.21■□□□□ 0.35
SREBF1-202ENST00000355815 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
SREBF1-202ENST00000355815 PHACTR3Q96KR7 559 aa17.21■□□□□ 0.35
SREBF1-202ENST00000355815 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
SREBF1-202ENST00000355815 CAVIN1Q6NZI2 390 aaKnown RBP17.21■□□□□ 0.35
SREBF1-202ENST00000355815 SMARCA5O60264 1052 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-202ENST00000355815 CHD1LQ86WJ1 897 aa17.2■□□□□ 0.34
SREBF1-202ENST00000355815 TSPYL6Q8N831 410 aa17.2■□□□□ 0.34
SREBF1-202ENST00000355815 NFE2L2Q16236 605 aa17.2■□□□□ 0.34
SREBF1-202ENST00000355815 F6X3S4 739 aa17.19■□□□□ 0.34
SREBF1-202ENST00000355815 RRP9O43818 475 aaKnown RBP17.19■□□□□ 0.34
SREBF1-202ENST00000355815 XPCQ01831 940 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-202ENST00000355815 TBC1D2Q9BYX2 928 aa17.19■□□□□ 0.34
SREBF1-202ENST00000355815 KDM5CP41229 1560 aa17.19■□□□□ 0.34
SREBF1-202ENST00000355815 ST18O60284 1047 aa17.18■□□□□ 0.34
SREBF1-202ENST00000355815 ANO2Q9NQ90 1003 aa17.18■□□□□ 0.34
SREBF1-202ENST00000355815 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.18■□□□□ 0.348e-7■■□□□ 12.8
SREBF1-202ENST00000355815 ABTB2Q8N961 1025 aa17.18■□□□□ 0.34
SREBF1-202ENST00000355815 ERCC6L2Q5T890 1561 aa17.17■□□□□ 0.34
SREBF1-202ENST00000355815 AEBP1Q8IUX7 1158 aa17.17■□□□□ 0.34
SREBF1-202ENST00000355815 GRPEL1Q9HAV7 217 aa17.17■□□□□ 0.34
SREBF1-202ENST00000355815 UGGT1Q9NYU2 1555 aa17.17■□□□□ 0.34
SREBF1-202ENST00000355815 ATAD2Q6PL18 1390 aa17.17■□□□□ 0.34
SREBF1-202ENST00000355815 TEFQ10587 303 aa17.16■□□□□ 0.34
SREBF1-202ENST00000355815 SAMD9LQ8IVG5 1584 aa17.16■□□□□ 0.34
SREBF1-202ENST00000355815 AIMP1Q12904 312 aaKnown RBP17.15■□□□□ 0.34
SREBF1-202ENST00000355815 USHBP1Q8N6Y0 703 aa17.15■□□□□ 0.34
SREBF1-202ENST00000355815 PSME1Q06323 249 aa17.15■□□□□ 0.34
SREBF1-202ENST00000355815 POLKQ9UBT6 870 aa17.15■□□□□ 0.34
SREBF1-202ENST00000355815 EXOC6BQ9Y2D4 811 aa17.15■□□□□ 0.34
SREBF1-202ENST00000355815 ABCA8O94911 1581 aa17.14■□□□□ 0.34
SREBF1-202ENST00000355815 HSP90AB2PQ58FF8 381 aa17.14■□□□□ 0.33
SREBF1-202ENST00000355815 ABCC2Q92887 1545 aa17.14■□□□□ 0.33
SREBF1-202ENST00000355815 WDR7Q9Y4E6 1490 aa17.14■□□□□ 0.33
SREBF1-202ENST00000355815 CCAR2Q8N163 923 aaKnown RBP17.14■□□□□ 0.33
SREBF1-202ENST00000355815 MAP4K4O95819 1239 aaPredicted RBP17.14■□□□□ 0.33
SREBF1-202ENST00000355815 MCM4P33991 863 aa17.14■□□□□ 0.33
SREBF1-202ENST00000355815 MBIPQ9NS73 344 aa17.13■□□□□ 0.33
SREBF1-202ENST00000355815 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
SREBF1-202ENST00000355815 KDM2BQ8NHM5 1336 aa17.13■□□□□ 0.33
SREBF1-202ENST00000355815 WASLO00401 505 aaPredicted RBP17.13■□□□□ 0.33
SREBF1-202ENST00000355815 TPM2P07951 284 aa17.13■□□□□ 0.33
SREBF1-202ENST00000355815 TSHZ3Q63HK5 1081 aa17.13■□□□□ 0.33
SREBF1-202ENST00000355815 C8orf58Q8NAV2 365 aa17.13■□□□□ 0.33
SREBF1-202ENST00000355815 IL1RAPL2Q9NP60 686 aa17.12■□□□□ 0.33
SREBF1-202ENST00000355815 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
SREBF1-202ENST00000355815 NPHP1O15259 732 aa17.11■□□□□ 0.33
SREBF1-202ENST00000355815 POLR3AO14802 1390 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-202ENST00000355815 CDC45O75419 566 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms