RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 LNPKQ9C0E8 428 aa9.7□□□□□ -0.86
CD46-203ENST00000354848 NAP1L2Q9ULW6 460 aaPredicted RBP9.7□□□□□ -0.86
CD46-203ENST00000354848 CFAP74Q9C0B2 1584 aa9.7□□□□□ -0.86
CD46-203ENST00000354848 TARBP1Q13395 1621 aaKnown RBP9.7□□□□□ -0.86
CD46-203ENST00000354848 NUCB2P80303 420 aa9.69□□□□□ -0.86
CD46-203ENST00000354848 BMP2KLQ5H9B9 411 aa9.69□□□□□ -0.86
CD46-203ENST00000354848 DDX19BQ9UMR2 479 aa9.69□□□□□ -0.86
CD46-203ENST00000354848 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.69□□□□□ -0.86
CD46-203ENST00000354848 KANK1Q14678 1352 aa9.69□□□□□ -0.86
CD46-203ENST00000354848 ITPRIPQ8IWB1 547 aa9.69□□□□□ -0.86
CD46-203ENST00000354848 DNAJC5BQ9UF47 199 aa9.69□□□□□ -0.86
CD46-203ENST00000354848 SYCE3A1L190 88 aa9.69□□□□□ -0.86
CD46-203ENST00000354848 PRPF40AO75400 957 aaKnown RBP9.69□□□□□ -0.86
CD46-203ENST00000354848 TRIM27P14373 513 aa9.69□□□□□ -0.86
CD46-203ENST00000354848 PKP1Q13835 747 aa9.69□□□□□ -0.86
CD46-203ENST00000354848 TMEM63CQ9P1W3 806 aa9.69□□□□□ -0.86
CD46-203ENST00000354848 HMGN5P82970 282 aaKnown RBP9.68□□□□□ -0.86
CD46-203ENST00000354848 MADDQ8WXG6 1647 aa9.68□□□□□ -0.86
CD46-203ENST00000354848 PTMAP06454 111 aaKnown RBP9.68□□□□□ -0.86
CD46-203ENST00000354848 CHD1LQ86WJ1 897 aa9.68□□□□□ -0.86
CD46-203ENST00000354848 CHMP4BQ9H444 224 aaKnown RBP9.68□□□□□ -0.86
CD46-203ENST00000354848 UNC13BO14795 1591 aa9.67□□□□□ -0.86
CD46-203ENST00000354848 HNRNPMP52272 730 aaKnown RBP eCLIP9.67□□□□□ -0.869e-8■■■■■ 28.4
CD46-203ENST00000354848 TBC1D9Q6ZT07 1266 aa9.67□□□□□ -0.86
CD46-203ENST00000354848 ARHGEF5Q12774 1597 aa9.67□□□□□ -0.86
CD46-203ENST00000354848 FAM177BA6PVY3 158 aa9.67□□□□□ -0.86
CD46-203ENST00000354848 RNF214Q8ND24 703 aa9.67□□□□□ -0.86
CD46-203ENST00000354848 SCAF11Q99590 1463 aaKnown RBP9.67□□□□□ -0.86
CD46-203ENST00000354848 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
CD46-203ENST00000354848 KIF3AQ9Y496 699 aa9.67□□□□□ -0.86
CD46-203ENST00000354848 SPDYE4A6NLX3 237 aa9.66□□□□□ -0.86
CD46-203ENST00000354848 PDIA4P13667 645 aaKnown RBP9.66□□□□□ -0.86
CD46-203ENST00000354848 CCDC27Q2M243 656 aa9.66□□□□□ -0.86
CD46-203ENST00000354848 SMC4Q9NTJ3 1288 aa9.66□□□□□ -0.86
CD46-203ENST00000354848 ZBTB40Q9NUA8 1239 aa9.66□□□□□ -0.86
CD46-203ENST00000354848 PIBF1Q8WXW3 757 aa9.66□□□□□ -0.86
CD46-203ENST00000354848 BCL2L12Q9HB09 334 aa9.66□□□□□ -0.86
CD46-203ENST00000354848 NSFL1CQ9UNZ2 370 aaKnown RBP9.66□□□□□ -0.86
CD46-203ENST00000354848 PLB1Q6P1J6 1458 aa9.66□□□□□ -0.86
CD46-203ENST00000354848 PDS5BQ9NTI5 1447 aa9.66□□□□□ -0.86
CD46-203ENST00000354848 NOLC1Q14978 699 aaKnown RBP eCLIP9.65□□□□□ -0.862e-8■■■□□ 18.1
CD46-203ENST00000354848 ATF7IPQ6VMQ6 1270 aa9.65□□□□□ -0.86
CD46-203ENST00000354848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.65□□□□□ -0.864e-9■■□□□ 11.7
CD46-203ENST00000354848 TAF3Q5VWG9 929 aa9.65□□□□□ -0.86
CD46-203ENST00000354848 IQGAP3Q86VI3 1631 aa9.65□□□□□ -0.87
CD46-203ENST00000354848 IGSF3O75054 1194 aa9.65□□□□□ -0.87
CD46-203ENST00000354848 TMEM57Q8N5G2 664 aa9.65□□□□□ -0.87
CD46-203ENST00000354848 ATP10AO60312 1499 aa9.64□□□□□ -0.87
CD46-203ENST00000354848 PDCL2Q8N4E4 241 aa9.64□□□□□ -0.87
CD46-203ENST00000354848 IPO4Q8TEX9 1081 aaKnown RBP9.64□□□□□ -0.87
CD46-203ENST00000354848 CT47B1P0C2W7 299 aaPredicted RBP9.64□□□□□ -0.87
CD46-203ENST00000354848 RABEP1Q15276 862 aa9.64□□□□□ -0.87
CD46-203ENST00000354848 SSH1Q8WYL5 1049 aa9.64□□□□□ -0.87
CD46-203ENST00000354848 TSR2Q969E8 191 aaKnown RBP9.64□□□□□ -0.87
CD46-203ENST00000354848 ZNF830Q96NB3 372 aaPredicted RBP9.64□□□□□ -0.87
CD46-203ENST00000354848 ZDHHC9Q9Y397 364 aa9.64□□□□□ -0.87
CD46-203ENST00000354848 CHAMP1Q96JM3 812 aa9.63□□□□□ -0.87
CD46-203ENST00000354848 MPNDQ8N594 471 aa9.63□□□□□ -0.87
CD46-203ENST00000354848 CWC22Q9HCG8 908 aaKnown RBP9.63□□□□□ -0.87
CD46-203ENST00000354848 CGNQ9P2M7 1197 aaKnown RBP9.63□□□□□ -0.87
CD46-203ENST00000354848 NOB1Q9ULX3 412 aaKnown RBP9.63□□□□□ -0.87
CD46-203ENST00000354848 TTC37Q6PGP7 1564 aa9.63□□□□□ -0.87
CD46-203ENST00000354848 VGLL3A8MV65 326 aa9.63□□□□□ -0.87
CD46-203ENST00000354848 U2AF2P26368 475 aaKnown RBP eCLIP9.63□□□□□ -0.875e-9■■■□□ 14.8
CD46-203ENST00000354848 ANKRD45Q5TZF3 282 aa9.63□□□□□ -0.87
CD46-203ENST00000354848 C17orf53Q8N3J3 647 aaPredicted RBP9.63□□□□□ -0.87
CD46-203ENST00000354848 EXOSC9Q06265 439 aaKnown RBP9.62□□□□□ -0.87
CD46-203ENST00000354848 FKBP5Q13451 457 aaPredicted RBP9.62□□□□□ -0.87
CD46-203ENST00000354848 ZGPATQ8N5A5 531 aaKnown RBP9.62□□□□□ -0.87
CD46-203ENST00000354848 TSPY26PQ9H489 355 aa9.62□□□□□ -0.87
CD46-203ENST00000354848 SPHKAPQ2M3C7 1700 aa9.62□□□□□ -0.87
CD46-203ENST00000354848 ZBTB22O15209 634 aa9.62□□□□□ -0.87
CD46-203ENST00000354848 ERVK-7P63135 1459 aa9.61□□□□□ -0.87
CD46-203ENST00000354848 CDC45O75419 566 aa9.61□□□□□ -0.87
CD46-203ENST00000354848 MBD3O95983 291 aa9.61□□□□□ -0.87
CD46-203ENST00000354848 TTC12Q9H892 705 aaPredicted RBP9.61□□□□□ -0.87
CD46-203ENST00000354848 SPTLC3Q9NUV7 552 aa9.61□□□□□ -0.87
CD46-203ENST00000354848 ZNF771Q7L3S4 317 aaPredicted RBP9.61□□□□□ -0.87
CD46-203ENST00000354848 ANKRD7Q92527 254 aa9.61□□□□□ -0.87
CD46-203ENST00000354848 NOS1P29475 1434 aa9.6□□□□□ -0.87
CD46-203ENST00000354848 CLTCL1P53675 1640 aa9.6□□□□□ -0.87
CD46-203ENST00000354848 DUOX2Q9NRD8 1548 aa9.6□□□□□ -0.87
CD46-203ENST00000354848 MAGI1Q96QZ7 1491 aaPredicted RBP9.6□□□□□ -0.87
CD46-203ENST00000354848 PLEKHD1A6NEE1 506 aa9.6□□□□□ -0.87
CD46-203ENST00000354848 MORC1Q86VD1 984 aa9.6□□□□□ -0.87
CD46-203ENST00000354848 ADGRB2O60241 1585 aa9.6□□□□□ -0.87
CD46-203ENST00000354848 SAMD9LQ8IVG5 1584 aa9.6□□□□□ -0.87
CD46-203ENST00000354848 PPRC1Q5VV67 1664 aaKnown RBP9.6□□□□□ -0.87
CD46-203ENST00000354848 NCBP3Q53F19 620 aaKnown RBP9.6□□□□□ -0.87
CD46-203ENST00000354848 GCC1Q96CN9 775 aa9.6□□□□□ -0.87
CD46-203ENST00000354848 PPIP5K1Q6PFW1 1433 aa9.59□□□□□ -0.87
CD46-203ENST00000354848 FEZ1Q99689 392 aa9.59□□□□□ -0.87
CD46-203ENST00000354848 ZNF518AQ6AHZ1 1483 aa9.59□□□□□ -0.87
CD46-203ENST00000354848 REREQ9P2R6 1566 aa9.59□□□□□ -0.87
CD46-203ENST00000354848 RIOK3O14730 519 aaKnown RBP9.58□□□□□ -0.88
CD46-203ENST00000354848 FOXD4L5Q5VV16 416 aaPredicted RBP9.58□□□□□ -0.88
CD46-203ENST00000354848 FOXD4L4Q8WXT5 416 aaPredicted RBP9.58□□□□□ -0.88
CD46-203ENST00000354848 USP26Q9BXU7 913 aa9.58□□□□□ -0.88
CD46-203ENST00000354848 USP25Q9UHP3 1055 aa9.58□□□□□ -0.88
CD46-203ENST00000354848 IFT140Q96RY7 1462 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms