RNA–Protein interactions for RNA: ENST00000354785.8

FN1-203, Transcript of fibronectin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FN1, Length 8,905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-203ENST00000354785 C1orf115Q9H7X2 142 aa13.22□□□□□ -0.29
FN1-203ENST00000354785 CDC45O75419 566 aa13.22□□□□□ -0.29
FN1-203ENST00000354785 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
FN1-203ENST00000354785 THOC2Q8NI27 1593 aaKnown RBP13.22□□□□□ -0.29
FN1-203ENST00000354785 TWISTNBQ3B726 338 aaPredicted RBP13.22□□□□□ -0.29
FN1-203ENST00000354785 WASHC4Q2M389 1173 aa13.21□□□□□ -0.29
FN1-203ENST00000354785 GNAI3P08754 354 aa13.21□□□□□ -0.29
FN1-203ENST00000354785 SULT6B1Q6IMI4 303 aa13.21□□□□□ -0.29
FN1-203ENST00000354785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.21□□□□□ -0.3
FN1-203ENST00000354785 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.21□□□□□ -0.3
FN1-203ENST00000354785 ANKRD20A12PQ8NF67 263 aa13.21□□□□□ -0.3
FN1-203ENST00000354785 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.3
FN1-203ENST00000354785 SURF6O75683 361 aaKnown RBP13.2□□□□□ -0.3
FN1-203ENST00000354785 KIF6Q6ZMV9 814 aa13.2□□□□□ -0.3
FN1-203ENST00000354785 ZNF592Q92610 1267 aa13.2□□□□□ -0.3
FN1-203ENST00000354785 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
FN1-203ENST00000354785 GNAI2P04899 355 aa13.2□□□□□ -0.3
FN1-203ENST00000354785 SAFBQ15424 915 aaKnown RBP eCLIP13.2□□□□□ -0.3
FN1-203ENST00000354785 CCDC27Q2M243 656 aa13.2□□□□□ -0.3
FN1-203ENST00000354785 PNISRQ8TF01 805 aaKnown RBP13.2□□□□□ -0.3
FN1-203ENST00000354785 EXOSC9Q06265 439 aaKnown RBP13.2□□□□□ -0.3
FN1-203ENST00000354785 SASS6Q6UVJ0 657 aa13.2□□□□□ -0.3
FN1-203ENST00000354785 PLB1Q6P1J6 1458 aa13.2□□□□□ -0.3
FN1-203ENST00000354785 THEMISQ8N1K5 641 aaPredicted RBP13.2□□□□□ -0.3
FN1-203ENST00000354785 PDE3AQ14432 1141 aa13.2□□□□□ -0.3
FN1-203ENST00000354785 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
FN1-203ENST00000354785 MAP3K1Q13233 1512 aa13.2□□□□□ -0.3
FN1-203ENST00000354785 ANKRD30BQ9BXX2 1392 aa13.19□□□□□ -0.3
FN1-203ENST00000354785 BCAR3O75815 825 aa13.19□□□□□ -0.3
FN1-203ENST00000354785 PSMA5P28066 241 aa13.19□□□□□ -0.3
FN1-203ENST00000354785 PCMTD1Q96MG8 357 aaPredicted RBP13.19□□□□□ -0.3
FN1-203ENST00000354785 FYB1O15117 783 aa13.19□□□□□ -0.3
FN1-203ENST00000354785 TSPOAP1O95153 1857 aa13.19□□□□□ -0.3
FN1-203ENST00000354785 HSP90AA2PQ14568 343 aaPredicted RBP13.19□□□□□ -0.3
FN1-203ENST00000354785 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
FN1-203ENST00000354785 NSD3Q9BZ95 1437 aa13.18□□□□□ -0.3
FN1-203ENST00000354785 IPO7O95373 1038 aaKnown RBP13.18□□□□□ -0.3
FN1-203ENST00000354785 CTDP1Q9Y5B0 961 aaPredicted RBP13.18□□□□□ -0.3
FN1-203ENST00000354785 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
FN1-203ENST00000354785 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
FN1-203ENST00000354785 FSD1Q9BTV5 496 aa13.18□□□□□ -0.3
FN1-203ENST00000354785 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
FN1-203ENST00000354785 HDGFL1Q5TGJ6 251 aa13.18□□□□□ -0.3
FN1-203ENST00000354785 NFKBIBQ15653 356 aa13.17□□□□□ -0.3
FN1-203ENST00000354785 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
FN1-203ENST00000354785 CCDC70Q6NSX1 233 aa13.17□□□□□ -0.3
FN1-203ENST00000354785 RRS1Q15050 365 aaKnown RBP13.16□□□□□ -0.3
FN1-203ENST00000354785 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
FN1-203ENST00000354785 PROSER2Q86WR7 435 aaPredicted RBP13.16□□□□□ -0.3
FN1-203ENST00000354785 WDR63Q8IWG1 891 aa13.16□□□□□ -0.3
FN1-203ENST00000354785 HOMER1Q86YM7 354 aa13.16□□□□□ -0.3
FN1-203ENST00000354785 CCDC47Q96A33 483 aaKnown RBP13.16□□□□□ -0.3
FN1-203ENST00000354785 PRM3Q9NNZ6 103 aa13.16□□□□□ -0.3
FN1-203ENST00000354785 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
FN1-203ENST00000354785 KIF1BO60333 1816 aa13.15□□□□□ -0.3
FN1-203ENST00000354785 NEK4P51957 841 aa13.15□□□□□ -0.3
FN1-203ENST00000354785 HIP1O00291 1037 aa13.15□□□□□ -0.3
FN1-203ENST00000354785 CT47B1P0C2W7 299 aaPredicted RBP13.15□□□□□ -0.3
FN1-203ENST00000354785 CCT4P50991 539 aaKnown RBP13.15□□□□□ -0.3
FN1-203ENST00000354785 GCC1Q96CN9 775 aa13.15□□□□□ -0.3
FN1-203ENST00000354785 ADGRL1O94910 1474 aa13.15□□□□□ -0.3
FN1-203ENST00000354785 ATAD2Q6PL18 1390 aa13.15□□□□□ -0.3
FN1-203ENST00000354785 NASPP49321 788 aaPredicted RBP13.15□□□□□ -0.31
FN1-203ENST00000354785 ERC1Q8IUD2 1116 aa13.14□□□□□ -0.31
FN1-203ENST00000354785 ZNF428Q96B54 188 aa13.14□□□□□ -0.31
FN1-203ENST00000354785 DNAJC2Q99543 621 aaKnown RBP13.14□□□□□ -0.31
FN1-203ENST00000354785 NAT10Q9H0A0 1025 aaKnown RBP13.14□□□□□ -0.31
FN1-203ENST00000354785 BRMS1Q9HCU9 246 aa13.14□□□□□ -0.31
FN1-203ENST00000354785 TBC1D2BQ9UPU7 963 aa13.14□□□□□ -0.31
FN1-203ENST00000354785 ADGBQ8N7X0 1667 aa13.14□□□□□ -0.31
FN1-203ENST00000354785 PDZRN3Q9UPQ7 1066 aa13.14□□□□□ -0.31
FN1-203ENST00000354785 MYL6BP14649 208 aa13.14□□□□□ -0.31
FN1-203ENST00000354785 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
FN1-203ENST00000354785 SLC26A8Q96RN1 970 aa13.14□□□□□ -0.31
FN1-203ENST00000354785 XBP1P17861 261 aa13.14□□□□□ -0.31
FN1-203ENST00000354785 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
FN1-203ENST00000354785 PDCP20941 246 aa13.13□□□□□ -0.31
FN1-203ENST00000354785 SART3Q15020 963 aaKnown RBP13.13□□□□□ -0.31
FN1-203ENST00000354785 CCDC43Q96MW1 224 aaKnown RBP13.13□□□□□ -0.31
FN1-203ENST00000354785 FAM177BA6PVY3 158 aa13.13□□□□□ -0.31
FN1-203ENST00000354785 POGZQ7Z3K3 1410 aa13.13□□□□□ -0.31
FN1-203ENST00000354785 MCM2P49736 904 aa13.13□□□□□ -0.31
FN1-203ENST00000354785 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
FN1-203ENST00000354785 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
FN1-203ENST00000354785 RPGRIP1LQ68CZ1 1315 aa13.13□□□□□ -0.31
FN1-203ENST00000354785 SDF4Q9BRK5 362 aa13.12□□□□□ -0.31
FN1-203ENST00000354785 MVPQ14764 893 aaKnown RBP13.12□□□□□ -0.31
FN1-203ENST00000354785 TOM1L2Q6ZVM7 507 aa13.12□□□□□ -0.31
FN1-203ENST00000354785 CABP4P57796 275 aa13.12□□□□□ -0.31
FN1-203ENST00000354785 SIL1Q9H173 461 aa13.12□□□□□ -0.31
FN1-203ENST00000354785 ZNF530Q6P9A1 599 aaPredicted RBP13.11□□□□□ -0.31
FN1-203ENST00000354785 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
FN1-203ENST00000354785 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
FN1-203ENST00000354785 CAVIN1Q6NZI2 390 aaKnown RBP13.11□□□□□ -0.31
FN1-203ENST00000354785 CNNM1Q9NRU3 951 aa13.11□□□□□ -0.31
FN1-203ENST00000354785 CD109Q6YHK3 1445 aa13.11□□□□□ -0.31
FN1-203ENST00000354785 RABEP1Q15276 862 aa13.11□□□□□ -0.31
FN1-203ENST00000354785 MTMR7Q9Y216 660 aa13.1□□□□□ -0.31
FN1-203ENST00000354785 ABCC5O15440 1437 aa13.1□□□□□ -0.31
FN1-203ENST00000354785 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms