RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 NEO1Q92859 1461 aa24.97■■□□□ 1.59
COL13A1-201ENST00000354547 HDGFL2Q7Z4V5 671 aaPredicted RBP24.97■■□□□ 1.59
COL13A1-201ENST00000354547 PIK3C2BO00750 1634 aa24.97■■□□□ 1.59
COL13A1-201ENST00000354547 IL27Q8NEV9 243 aa24.96■■□□□ 1.59
COL13A1-201ENST00000354547 DIAPH1O60610 1272 aaKnown RBP24.96■■□□□ 1.59
COL13A1-201ENST00000354547 RTN4Q9NQC3 1192 aaKnown RBP24.96■■□□□ 1.59
COL13A1-201ENST00000354547 SLKQ9H2G2 1235 aaPredicted RBP24.96■■□□□ 1.59
COL13A1-201ENST00000354547 MYO5BQ9ULV0 1848 aa24.95■■□□□ 1.58
COL13A1-201ENST00000354547 TRIM27P14373 513 aa24.95■■□□□ 1.58
COL13A1-201ENST00000354547 USP32Q8NFA0 1604 aa24.94■■□□□ 1.58
COL13A1-201ENST00000354547 NOB1Q9ULX3 412 aaKnown RBP24.94■■□□□ 1.58
COL13A1-201ENST00000354547 YTHDC2Q9H6S0 1430 aaKnown RBP24.93■■□□□ 1.58
COL13A1-201ENST00000354547 ATAD2Q6PL18 1390 aa24.92■■□□□ 1.58
COL13A1-201ENST00000354547 GSE1Q14687 1217 aa24.92■■□□□ 1.58
COL13A1-201ENST00000354547 HMOX1P09601 288 aa24.91■■□□□ 1.58
COL13A1-201ENST00000354547 ARHGAP31Q2M1Z3 1444 aa24.91■■□□□ 1.58
COL13A1-201ENST00000354547 UPF2Q9HAU5 1272 aaKnown RBP24.9■■□□□ 1.58
COL13A1-201ENST00000354547 PTPRMP28827 1452 aa24.9■■□□□ 1.58
COL13A1-201ENST00000354547 SPRYD3Q8NCJ5 442 aa24.89■■□□□ 1.57
COL13A1-201ENST00000354547 FAM69CQ0P6D2 419 aa24.88■■□□□ 1.57
COL13A1-201ENST00000354547 THUMPD2Q9BTF0 503 aaKnown RBP24.88■■□□□ 1.57
COL13A1-201ENST00000354547 PRKAR2BP31323 418 aa24.88■■□□□ 1.57
COL13A1-201ENST00000354547 ATF7IPQ6VMQ6 1270 aa24.88■■□□□ 1.57
COL13A1-201ENST00000354547 AAMPQ13685 434 aa24.87■■□□□ 1.57
COL13A1-201ENST00000354547 TMEM57Q8N5G2 664 aa24.87■■□□□ 1.57
COL13A1-201ENST00000354547 BECN1Q14457 450 aa24.86■■□□□ 1.57
COL13A1-201ENST00000354547 ZFYVE9O95405 1425 aa24.86■■□□□ 1.57
COL13A1-201ENST00000354547 CD163L1Q9NR16 1453 aa24.86■■□□□ 1.57
COL13A1-201ENST00000354547 ELL2O00472 640 aaPredicted RBP24.85■■□□□ 1.57
COL13A1-201ENST00000354547 ZRANB1Q9UGI0 708 aa24.83■■□□□ 1.57
COL13A1-201ENST00000354547 DDX19BQ9UMR2 479 aa24.83■■□□□ 1.57
COL13A1-201ENST00000354547 RICTORQ6R327 1708 aa24.83■■□□□ 1.57
COL13A1-201ENST00000354547 TMEM131LA2VDJ0 1609 aa24.83■■□□□ 1.56
COL13A1-201ENST00000354547 MFAP1P55081 439 aaKnown RBP24.83■■□□□ 1.56
COL13A1-201ENST00000354547 PHACTR3Q96KR7 559 aa24.82■■□□□ 1.56
COL13A1-201ENST00000354547 POLKQ9UBT6 870 aa24.82■■□□□ 1.56
COL13A1-201ENST00000354547 EMILIN1Q9Y6C2 1016 aa24.82■■□□□ 1.56
COL13A1-201ENST00000354547 ADGRB2O60241 1585 aa24.82■■□□□ 1.56
COL13A1-201ENST00000354547 COL3A1P02461 1466 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-201ENST00000354547 CT47B1P0C2W7 299 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-201ENST00000354547 BRPF3Q9ULD4 1205 aa24.81■■□□□ 1.56
COL13A1-201ENST00000354547 PREX1Q8TCU6 1659 aa24.81■■□□□ 1.56
COL13A1-201ENST00000354547 NCKAP5LQ9HCH0 1330 aa24.81■■□□□ 1.56
COL13A1-201ENST00000354547 NCBP3Q53F19 620 aaKnown RBP24.79■■□□□ 1.56
COL13A1-201ENST00000354547 TBC1D32Q96NH3 1257 aa24.79■■□□□ 1.56
COL13A1-201ENST00000354547 NME9Q86XW9 330 aa24.79■■□□□ 1.56
COL13A1-201ENST00000354547 NLRP1Q9C000 1473 aa24.79■■□□□ 1.56
COL13A1-201ENST00000354547 PNNQ9H307 717 aaKnown RBP24.78■■□□□ 1.56
COL13A1-201ENST00000354547 ALKQ9UM73 1620 aa24.78■■□□□ 1.56
COL13A1-201ENST00000354547 FCHSD2O94868 740 aa24.78■■□□□ 1.56
COL13A1-201ENST00000354547 TXNDC2Q86VQ3 553 aa24.78■■□□□ 1.56
COL13A1-201ENST00000354547 RSPH6AQ9H0K4 717 aa24.77■■□□□ 1.56
COL13A1-201ENST00000354547 VIRMAQ69YN4 1812 aaKnown RBP24.76■■□□□ 1.55
COL13A1-201ENST00000354547 IPO8O15397 1037 aaKnown RBP24.76■■□□□ 1.55
COL13A1-201ENST00000354547 TBC1D2Q9BYX2 928 aa24.76■■□□□ 1.55
COL13A1-201ENST00000354547 LNPKQ9C0E8 428 aa24.75■■□□□ 1.55
COL13A1-201ENST00000354547 C1orf115Q9H7X2 142 aa24.75■■□□□ 1.55
COL13A1-201ENST00000354547 IL16Q14005 1332 aa24.75■■□□□ 1.55
COL13A1-201ENST00000354547 RRS1Q15050 365 aaKnown RBP24.75■■□□□ 1.55
COL13A1-201ENST00000354547 ARHGEF40Q8TER5 1519 aa24.74■■□□□ 1.55
COL13A1-201ENST00000354547 TSPYL6Q8N831 410 aa24.74■■□□□ 1.55
COL13A1-201ENST00000354547 ZBTB40Q9NUA8 1239 aa24.74■■□□□ 1.55
COL13A1-201ENST00000354547 KIF16BQ96L93 1317 aa24.73■■□□□ 1.55
COL13A1-201ENST00000354547 HDAC1Q13547 482 aaPredicted RBP24.73■■□□□ 1.55
COL13A1-201ENST00000354547 PNPLA6Q8IY17 1366 aa24.72■■□□□ 1.55
COL13A1-201ENST00000354547 NUTM2FA1L443 756 aa24.71■■□□□ 1.55
COL13A1-201ENST00000354547 C22orf23Q9BZE7 217 aa24.71■■□□□ 1.55
COL13A1-201ENST00000354547 TSPOAP1O95153 1857 aa24.7■■□□□ 1.54
COL13A1-201ENST00000354547 NFE2L2Q16236 605 aa24.7■■□□□ 1.54
COL13A1-201ENST00000354547 FAM83GA6ND36 823 aa24.69■■□□□ 1.54
COL13A1-201ENST00000354547 RIMS2Q9UQ26 1411 aa24.69■■□□□ 1.54
COL13A1-201ENST00000354547 LRRC7Q96NW7 1537 aa24.69■■□□□ 1.54
COL13A1-201ENST00000354547 DCTN1Q14203 1278 aa24.69■■□□□ 1.54
COL13A1-201ENST00000354547 WASLO00401 505 aaPredicted RBP24.68■■□□□ 1.54
COL13A1-201ENST00000354547 SMC5Q8IY18 1101 aa24.68■■□□□ 1.54
COL13A1-201ENST00000354547 ARXQ96QS3 562 aa24.67■■□□□ 1.54
COL13A1-201ENST00000354547 MED14O60244 1454 aa24.67■■□□□ 1.54
COL13A1-201ENST00000354547 ESF1Q9H501 851 aaKnown RBP24.67■■□□□ 1.54
COL13A1-201ENST00000354547 NUDT16Q96DE0 195 aaKnown RBP24.66■■□□□ 1.54
COL13A1-201ENST00000354547 ALDH1L2Q3SY69 923 aa24.66■■□□□ 1.54
COL13A1-201ENST00000354547 VAMP4O75379 141 aa24.65■■□□□ 1.54
COL13A1-201ENST00000354547 ANKRD45Q5TZF3 282 aa24.65■■□□□ 1.54
COL13A1-201ENST00000354547 MBIPQ9NS73 344 aa24.65■■□□□ 1.54
COL13A1-201ENST00000354547 PPIP5K1Q6PFW1 1433 aa24.65■■□□□ 1.54
COL13A1-201ENST00000354547 SOX12O15370 315 aa24.65■■□□□ 1.54
COL13A1-201ENST00000354547 COG3Q96JB2 828 aa24.65■■□□□ 1.54
COL13A1-201ENST00000354547 A2ML1A8K2U0 1454 aa24.64■■□□□ 1.54
COL13A1-201ENST00000354547 METP08581 1390 aa24.64■■□□□ 1.54
COL13A1-201ENST00000354547 IL13P35225 146 aa24.64■■□□□ 1.54
COL13A1-201ENST00000354547 ANTXR1Q9H6X2 564 aa24.64■■□□□ 1.54
COL13A1-201ENST00000354547 FAM135BQ49AJ0 1406 aa24.63■■□□□ 1.53
COL13A1-201ENST00000354547 ANKRD26Q9UPS8 1709 aa24.63■■□□□ 1.53
COL13A1-201ENST00000354547 CLTCQ00610 1675 aaKnown RBP24.62■■□□□ 1.53
COL13A1-201ENST00000354547 NUCB1Q02818 461 aa24.61■■□□□ 1.53
COL13A1-201ENST00000354547 CHD1LQ86WJ1 897 aa24.61■■□□□ 1.53
COL13A1-201ENST00000354547 MRPL50Q8N5N7 158 aaKnown RBP24.61■■□□□ 1.53
COL13A1-201ENST00000354547 C8orf58Q8NAV2 365 aa24.61■■□□□ 1.53
COL13A1-201ENST00000354547 MAP2P11137 1827 aaKnown RBP24.61■■□□□ 1.53
COL13A1-201ENST00000354547 GNAI1P63096 354 aa24.61■■□□□ 1.53
COL13A1-201ENST00000354547 TWISTNBQ3B726 338 aaPredicted RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms