RNA–Protein interactions for RNA: ENST00000354412.7

LRP8-203, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-203ENST00000354412 RRP7AQ9Y3A4 280 aaKnown RBP17.49■□□□□ 0.39
LRP8-203ENST00000354412 DIP2BQ9P265 1576 aa17.48■□□□□ 0.39
LRP8-203ENST00000354412 PTMSP20962 102 aa17.48■□□□□ 0.39
LRP8-203ENST00000354412 HDAC1Q13547 482 aaPredicted RBP17.48■□□□□ 0.39
LRP8-203ENST00000354412 BCL2L13Q9BXK5 485 aa17.48■□□□□ 0.39
LRP8-203ENST00000354412 ADGRF5Q8IZF2 1346 aa17.48■□□□□ 0.39
LRP8-203ENST00000354412 IQSEC2Q5JU85 1478 aa17.47■□□□□ 0.39
LRP8-203ENST00000354412 ESPNB1AK53 854 aa17.46■□□□□ 0.39
LRP8-203ENST00000354412 CFAP70Q5T0N1 1121 aa17.46■□□□□ 0.39
LRP8-203ENST00000354412 SKOR2Q2VWA4 1001 aaPredicted RBP17.46■□□□□ 0.39
LRP8-203ENST00000354412 TRIM44Q96DX7 344 aaPredicted RBP17.46■□□□□ 0.39
LRP8-203ENST00000354412 CIZ1Q9ULV3 898 aaPredicted RBP17.46■□□□□ 0.39
LRP8-203ENST00000354412 TNNQ9UQP3 1299 aa17.46■□□□□ 0.39
LRP8-203ENST00000354412 REREQ9P2R6 1566 aa17.45■□□□□ 0.38
LRP8-203ENST00000354412 SNX21Q969T3 373 aa17.45■□□□□ 0.38
LRP8-203ENST00000354412 GBP4Q96PP9 640 aa17.45■□□□□ 0.38
LRP8-203ENST00000354412 DDX19BQ9UMR2 479 aa17.45■□□□□ 0.38
LRP8-203ENST00000354412 ADGRB1O14514 1584 aa17.44■□□□□ 0.38
LRP8-203ENST00000354412 MLECQ14165 292 aa17.44■□□□□ 0.38
LRP8-203ENST00000354412 QRICH2Q9H0J4 1663 aa17.44■□□□□ 0.38
LRP8-203ENST00000354412 RBM25P49756 843 aaKnown RBP17.43■□□□□ 0.38
LRP8-203ENST00000354412 NSD3Q9BZ95 1437 aa17.43■□□□□ 0.38
LRP8-203ENST00000354412 NEXMIFQ5QGS0 1516 aa17.43■□□□□ 0.38
LRP8-203ENST00000354412 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
LRP8-203ENST00000354412 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
LRP8-203ENST00000354412 TNNT2P45379 298 aaPredicted RBP17.41■□□□□ 0.38
LRP8-203ENST00000354412 SHPRHQ149N8 1683 aa17.41■□□□□ 0.38
LRP8-203ENST00000354412 NCOA3Q9Y6Q9 1424 aa17.41■□□□□ 0.38
LRP8-203ENST00000354412 DDIT3P35638 169 aa17.41■□□□□ 0.38
LRP8-203ENST00000354412 MTHFSP49914 203 aa17.41■□□□□ 0.38
LRP8-203ENST00000354412 SMC5Q8IY18 1101 aa17.41■□□□□ 0.38
LRP8-203ENST00000354412 C14orf93Q9H972 538 aaKnown RBP17.39■□□□□ 0.38
LRP8-203ENST00000354412 SMC4Q9NTJ3 1288 aa17.39■□□□□ 0.38
LRP8-203ENST00000354412 ZFYVE9O95405 1425 aa17.39■□□□□ 0.37
LRP8-203ENST00000354412 ITPRIPQ8IWB1 547 aa17.38■□□□□ 0.37
LRP8-203ENST00000354412 AGLP35573 1532 aa17.38■□□□□ 0.37
LRP8-203ENST00000354412 HSP90AB1P08238 724 aaKnown RBP17.37■□□□□ 0.37
LRP8-203ENST00000354412 ATF7IPQ6VMQ6 1270 aa17.37■□□□□ 0.37
LRP8-203ENST00000354412 TNPO1Q92973 898 aaKnown RBP17.37■□□□□ 0.37
LRP8-203ENST00000354412 ARHGEF28Q8N1W1 1705 aaKnown RBP17.37■□□□□ 0.37
LRP8-203ENST00000354412 KIF13AQ9H1H9 1805 aa17.37■□□□□ 0.37
LRP8-203ENST00000354412 U2AF1L5P0DN76 240 aaPredicted RBP17.37■□□□□ 0.37
LRP8-203ENST00000354412 TRIM27P14373 513 aa17.37■□□□□ 0.37
LRP8-203ENST00000354412 U2AF1Q01081 240 aaKnown RBP eCLIP17.37■□□□□ 0.37
LRP8-203ENST00000354412 FBXO31Q5XUX0 539 aaPredicted RBP17.37■□□□□ 0.37
LRP8-203ENST00000354412 PKNOX2Q96KN3 472 aa17.37■□□□□ 0.37
LRP8-203ENST00000354412 TPM2P07951 284 aa17.36■□□□□ 0.37
LRP8-203ENST00000354412 IPO8O15397 1037 aaKnown RBP17.36■□□□□ 0.37
LRP8-203ENST00000354412 RAB3GAP1Q15042 981 aa17.36■□□□□ 0.37
LRP8-203ENST00000354412 SLC12A5Q9H2X9 1139 aa17.36■□□□□ 0.37
LRP8-203ENST00000354412 USP32Q8NFA0 1604 aa17.36■□□□□ 0.37
LRP8-203ENST00000354412 SLC52A1Q9NWF4 448 aa17.35■□□□□ 0.37
LRP8-203ENST00000354412 TMEM131LA2VDJ0 1609 aa17.35■□□□□ 0.37
LRP8-203ENST00000354412 VSIG10Q8N0Z9 540 aa17.35■□□□□ 0.37
LRP8-203ENST00000354412 ANP32BQ92688 251 aaKnown RBP17.35■□□□□ 0.37
LRP8-203ENST00000354412 GOLGA6L22H0YM25 854 aa17.35■□□□□ 0.37
LRP8-203ENST00000354412 TMEM132EQ6IEE7 984 aa17.35■□□□□ 0.37
LRP8-203ENST00000354412 NSD2O96028 1365 aa17.34■□□□□ 0.37
LRP8-203ENST00000354412 VGFO15240 615 aaPredicted RBP17.34■□□□□ 0.37
LRP8-203ENST00000354412 NUCB1Q02818 461 aa17.34■□□□□ 0.37
LRP8-203ENST00000354412 ZBTB40Q9NUA8 1239 aa17.34■□□□□ 0.37
LRP8-203ENST00000354412 MYO5BQ9ULV0 1848 aa17.33■□□□□ 0.37
LRP8-203ENST00000354412 CCDC173Q0VFZ6 552 aa17.33■□□□□ 0.36
LRP8-203ENST00000354412 PUS7Q96PZ0 661 aaKnown RBP17.33■□□□□ 0.36
LRP8-203ENST00000354412 EXOSC9Q06265 439 aaKnown RBP17.33■□□□□ 0.36
LRP8-203ENST00000354412 SSH1Q8WYL5 1049 aa17.33■□□□□ 0.36
LRP8-203ENST00000354412 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
LRP8-203ENST00000354412 IDI1Q13907 227 aa17.32■□□□□ 0.36
LRP8-203ENST00000354412 IL16Q14005 1332 aa17.32■□□□□ 0.36
LRP8-203ENST00000354412 BMP2KLQ5H9B9 411 aa17.32■□□□□ 0.36
LRP8-203ENST00000354412 CHMP4BQ9H444 224 aaKnown RBP17.32■□□□□ 0.36
LRP8-203ENST00000354412 PPP6R1Q9UPN7 881 aa17.32■□□□□ 0.36
LRP8-203ENST00000354412 ERBB4Q15303 1308 aa17.31■□□□□ 0.36
LRP8-203ENST00000354412 TSR2Q969E8 191 aaKnown RBP17.31■□□□□ 0.36
LRP8-203ENST00000354412 NOB1Q9ULX3 412 aaKnown RBP17.31■□□□□ 0.36
LRP8-203ENST00000354412 CHD1LQ86WJ1 897 aa17.31■□□□□ 0.36
LRP8-203ENST00000354412 GAS2L3Q86XJ1 694 aa17.31■□□□□ 0.36
LRP8-203ENST00000354412 ABCC11Q96J66 1382 aa17.3■□□□□ 0.36
LRP8-203ENST00000354412 ZMYND15Q9H091 742 aa17.3■□□□□ 0.36
LRP8-203ENST00000354412 TRAK1Q9UPV9 953 aa17.3■□□□□ 0.36
LRP8-203ENST00000354412 TMEM57Q8N5G2 664 aa17.29■□□□□ 0.36
LRP8-203ENST00000354412 K7ELQ4 463 aaPredicted RBP17.29■□□□□ 0.36
LRP8-203ENST00000354412 PPP1R9BQ96SB3 815 aa17.29■□□□□ 0.36
LRP8-203ENST00000354412 ADGRB2O60241 1585 aa17.28■□□□□ 0.36
LRP8-203ENST00000354412 IBTKQ9P2D0 1353 aaPredicted RBP17.28■□□□□ 0.36
LRP8-203ENST00000354412 TMPOP42166 694 aaKnown RBP17.28■□□□□ 0.36
LRP8-203ENST00000354412 CLEC17AQ6ZS10 378 aa17.28■□□□□ 0.36
LRP8-203ENST00000354412 LNPKQ9C0E8 428 aa17.28■□□□□ 0.36
LRP8-203ENST00000354412 PDCL3Q9H2J4 239 aa17.28■□□□□ 0.36
LRP8-203ENST00000354412 ARHGEF40Q8TER5 1519 aa17.27■□□□□ 0.36
LRP8-203ENST00000354412 NASPP49321 788 aaPredicted RBP17.27■□□□□ 0.36
LRP8-203ENST00000354412 ALDH1L2Q3SY69 923 aa17.27■□□□□ 0.36
LRP8-203ENST00000354412 ZSCAN30Q86W11 494 aa17.27■□□□□ 0.35
LRP8-203ENST00000354412 GCC1Q96CN9 775 aa17.27■□□□□ 0.35
LRP8-203ENST00000354412 CLTCQ00610 1675 aaKnown RBP17.26■□□□□ 0.35
LRP8-203ENST00000354412 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
LRP8-203ENST00000354412 ANKRD36BQ8N2N9 1353 aa17.26■□□□□ 0.35
LRP8-203ENST00000354412 KLHL40Q2TBA0 621 aa17.26■□□□□ 0.35
LRP8-203ENST00000354412 ZNF428Q96B54 188 aa17.26■□□□□ 0.35
LRP8-203ENST00000354412 TULP4Q9NRJ4 1543 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms