RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 DDX17Q92841 729 aaKnown RBP14.32□□□□□ -0.12
SVIP-201ENST00000354193 ORAI2Q96SN7 254 aa14.31□□□□□ -0.12
SVIP-201ENST00000354193 TTC21BQ7Z4L5 1316 aa14.31□□□□□ -0.12
SVIP-201ENST00000354193 AEBP1Q8IUX7 1158 aa14.31□□□□□ -0.12
SVIP-201ENST00000354193 EXOSC9Q06265 439 aaKnown RBP14.3□□□□□ -0.12
SVIP-201ENST00000354193 TMPOP42166 694 aaKnown RBP14.3□□□□□ -0.12
SVIP-201ENST00000354193 PIK3C2BO00750 1634 aa14.3□□□□□ -0.12
SVIP-201ENST00000354193 TSHZ2Q9NRE2 1034 aa14.3□□□□□ -0.12
SVIP-201ENST00000354193 SBNO2Q9Y2G9 1366 aa14.29□□□□□ -0.12
SVIP-201ENST00000354193 FAM83GA6ND36 823 aa14.29□□□□□ -0.12
SVIP-201ENST00000354193 NEXMIFQ5QGS0 1516 aa14.29□□□□□ -0.12
SVIP-201ENST00000354193 SMG6Q86US8 1419 aaKnown RBP14.29□□□□□ -0.12
SVIP-201ENST00000354193 DUSP27Q5VZP5 1158 aa14.29□□□□□ -0.12
SVIP-201ENST00000354193 SLFN5Q08AF3 891 aa14.29□□□□□ -0.12
SVIP-201ENST00000354193 MIS18AQ9NYP9 233 aa14.29□□□□□ -0.12
SVIP-201ENST00000354193 ARHGEF40Q8TER5 1519 aa14.28□□□□□ -0.12
SVIP-201ENST00000354193 ITPRIPQ8IWB1 547 aa14.28□□□□□ -0.12
SVIP-201ENST00000354193 SIGLEC1Q9BZZ2 1709 aa14.27□□□□□ -0.12
SVIP-201ENST00000354193 PHACTR3Q96KR7 559 aa14.27□□□□□ -0.12
SVIP-201ENST00000354193 ZMYM4Q5VZL5 1548 aa14.27□□□□□ -0.13
SVIP-201ENST00000354193 ALKQ9UM73 1620 aa14.27□□□□□ -0.13
SVIP-201ENST00000354193 USP35Q9P2H5 1018 aa14.26□□□□□ -0.13
SVIP-201ENST00000354193 KDM5AP29375 1690 aaKnown RBP14.26□□□□□ -0.13
SVIP-201ENST00000354193 PREX1Q8TCU6 1659 aa14.26□□□□□ -0.13
SVIP-201ENST00000354193 MCM10Q7L590 875 aa14.26□□□□□ -0.13
SVIP-201ENST00000354193 AGLP35573 1532 aa14.25□□□□□ -0.13
SVIP-201ENST00000354193 CABLES1Q8TDN4 633 aa14.25□□□□□ -0.13
SVIP-201ENST00000354193 KIF13AQ9H1H9 1805 aa14.24□□□□□ -0.13
SVIP-201ENST00000354193 APBB1O00213 710 aa14.23□□□□□ -0.13
SVIP-201ENST00000354193 ARXQ96QS3 562 aa14.23□□□□□ -0.13
SVIP-201ENST00000354193 NLRP2Q9NX02 1062 aa14.23□□□□□ -0.13
SVIP-201ENST00000354193 ZFYVE9O95405 1425 aa14.23□□□□□ -0.13
SVIP-201ENST00000354193 ZNF428Q96B54 188 aa14.23□□□□□ -0.13
SVIP-201ENST00000354193 PUS7Q96PZ0 661 aaKnown RBP14.23□□□□□ -0.13
SVIP-201ENST00000354193 ZBTB47Q9UFB7 747 aaPredicted RBP14.23□□□□□ -0.13
SVIP-201ENST00000354193 RBM19Q9Y4C8 960 aaKnown RBP14.23□□□□□ -0.13
SVIP-201ENST00000354193 MYO5BQ9ULV0 1848 aa14.22□□□□□ -0.13
SVIP-201ENST00000354193 PLEKHG1Q9ULL1 1385 aa14.22□□□□□ -0.13
SVIP-201ENST00000354193 FCHSD2O94868 740 aa14.22□□□□□ -0.13
SVIP-201ENST00000354193 SLC4A10Q6U841 1118 aa14.22□□□□□ -0.13
SVIP-201ENST00000354193 ADGRB1O14514 1584 aa14.22□□□□□ -0.13
SVIP-201ENST00000354193 TNNQ9UQP3 1299 aa14.22□□□□□ -0.13
SVIP-201ENST00000354193 POLR3AO14802 1390 aaPredicted RBP14.21□□□□□ -0.13
SVIP-201ENST00000354193 DAXXQ9UER7 740 aaPredicted RBP14.21□□□□□ -0.13
SVIP-201ENST00000354193 EIF4A2Q14240 407 aaKnown RBP14.21□□□□□ -0.13
SVIP-201ENST00000354193 NINLQ9Y2I6 1382 aa14.21□□□□□ -0.13
SVIP-201ENST00000354193 TULP4Q9NRJ4 1543 aa14.21□□□□□ -0.14
SVIP-201ENST00000354193 CHRNA2Q15822 529 aa14.21□□□□□ -0.14
SVIP-201ENST00000354193 MAP3K19Q56UN5 1328 aa14.2□□□□□ -0.14
SVIP-201ENST00000354193 KRT28Q7Z3Y7 464 aa14.2□□□□□ -0.14
SVIP-201ENST00000354193 TMEM131LA2VDJ0 1609 aa14.2□□□□□ -0.14
SVIP-201ENST00000354193 NPC1L1Q9UHC9 1359 aa14.2□□□□□ -0.14
SVIP-201ENST00000354193 NRXN1Q9ULB1 1477 aa14.19□□□□□ -0.14
SVIP-201ENST00000354193 EIF2S2P20042 333 aaKnown RBP14.19□□□□□ -0.14
SVIP-201ENST00000354193 NSD2O96028 1365 aa14.19□□□□□ -0.14
SVIP-201ENST00000354193 PTPRMP28827 1452 aa14.19□□□□□ -0.14
SVIP-201ENST00000354193 QRICH2Q9H0J4 1663 aa14.19□□□□□ -0.14
SVIP-201ENST00000354193 NLRP1Q9C000 1473 aa14.19□□□□□ -0.14
SVIP-201ENST00000354193 NFE2L2Q16236 605 aa14.18□□□□□ -0.14
SVIP-201ENST00000354193 ERICH6BQ5W0A0 696 aa14.18□□□□□ -0.14
SVIP-201ENST00000354193 LRRC59Q96AG4 307 aaKnown RBP14.18□□□□□ -0.14
SVIP-201ENST00000354193 LMOD3Q0VAK6 560 aa14.18□□□□□ -0.14
SVIP-201ENST00000354193 TSPYL4Q9UJ04 414 aa14.18□□□□□ -0.14
SVIP-201ENST00000354193 CALD1Q05682 793 aaKnown RBP14.17□□□□□ -0.14
SVIP-201ENST00000354193 KRT24Q2M2I5 525 aa14.17□□□□□ -0.14
SVIP-201ENST00000354193 IQGAP1P46940 1657 aa14.17□□□□□ -0.14
SVIP-201ENST00000354193 PPLO60437 1756 aa14.17□□□□□ -0.14
SVIP-201ENST00000354193 MYT1Q01538 1121 aa14.17□□□□□ -0.14
SVIP-201ENST00000354193 ZKSCAN2Q63HK3 967 aa14.17□□□□□ -0.14
SVIP-201ENST00000354193 STRN4Q9NRL3 753 aa14.17□□□□□ -0.14
SVIP-201ENST00000354193 FANCIQ9NVI1 1328 aa14.17□□□□□ -0.14
SVIP-201ENST00000354193 ADAMTS13Q76LX8 1427 aa14.17□□□□□ -0.14
SVIP-201ENST00000354193 WDR63Q8IWG1 891 aa14.16□□□□□ -0.14
SVIP-201ENST00000354193 SSH1Q8WYL5 1049 aa14.16□□□□□ -0.14
SVIP-201ENST00000354193 PLEKHG3A1L390 1219 aa14.15□□□□□ -0.14
SVIP-201ENST00000354193 ANP32AP39687 249 aaKnown RBP14.15□□□□□ -0.14
SVIP-201ENST00000354193 ZNF330Q9Y3S2 320 aaPredicted RBP14.15□□□□□ -0.14
SVIP-201ENST00000354193 GNAI1P63096 354 aa14.15□□□□□ -0.14
SVIP-201ENST00000354193 TEFQ10587 303 aa14.15□□□□□ -0.14
SVIP-201ENST00000354193 C19orf44Q9H6X5 657 aa14.15□□□□□ -0.14
SVIP-201ENST00000354193 NOB1Q9ULX3 412 aaKnown RBP14.15□□□□□ -0.14
SVIP-201ENST00000354193 RARSP54136 660 aaKnown RBP14.15□□□□□ -0.14
SVIP-201ENST00000354193 SPATA31D1Q6ZQQ2 1576 aa14.15□□□□□ -0.14
SVIP-201ENST00000354193 ZC3H13Q5T200 1668 aaKnown RBP14.15□□□□□ -0.15
SVIP-201ENST00000354193 DZIP1LQ8IYY4 767 aaKnown RBP14.14□□□□□ -0.15
SVIP-201ENST00000354193 IPO8O15397 1037 aaKnown RBP14.14□□□□□ -0.15
SVIP-201ENST00000354193 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
SVIP-201ENST00000354193 TWISTNBQ3B726 338 aaPredicted RBP14.14□□□□□ -0.15
SVIP-201ENST00000354193 NGEFQ8N5V2 710 aa14.14□□□□□ -0.15
SVIP-201ENST00000354193 EDC4Q6P2E9 1401 aaKnown RBP14.14□□□□□ -0.15
SVIP-201ENST00000354193 C1orf115Q9H7X2 142 aa14.14□□□□□ -0.15
SVIP-201ENST00000354193 IL13P35225 146 aa14.14□□□□□ -0.15
SVIP-201ENST00000354193 EYA1Q99502 592 aa14.14□□□□□ -0.15
SVIP-201ENST00000354193 RSPH6AQ9H0K4 717 aa14.14□□□□□ -0.15
SVIP-201ENST00000354193 CCDC9Q9Y3X0 531 aaKnown RBP14.14□□□□□ -0.15
SVIP-201ENST00000354193 SETBP1Q9Y6X0 1596 aa14.14□□□□□ -0.15
SVIP-201ENST00000354193 PTPRUQ92729 1446 aa14.13□□□□□ -0.15
SVIP-201ENST00000354193 SETD1BQ9UPS6 1966 aaKnown RBP14.13□□□□□ -0.15
SVIP-201ENST00000354193 EVA1CP58658 441 aa14.13□□□□□ -0.15
SVIP-201ENST00000354193 KAT6BQ8WYB5 2073 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms