RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
PTPN2-203ENST00000353319 TRMT2AQ8IZ69 625 aaKnown RBP13.91□□□□□ -0.18
PTPN2-203ENST00000353319 RUNDC1Q96C34 613 aa13.91□□□□□ -0.18
PTPN2-203ENST00000353319 PPP4R2Q9NY27 417 aa13.91□□□□□ -0.18
PTPN2-203ENST00000353319 RCAN3Q9UKA8 241 aa13.91□□□□□ -0.18
PTPN2-203ENST00000353319 MON2Q7Z3U7 1717 aa13.91□□□□□ -0.18
PTPN2-203ENST00000353319 AKAP12Q02952 1782 aa13.91□□□□□ -0.18
PTPN2-203ENST00000353319 CCDC146Q8IYE0 955 aa13.9□□□□□ -0.19
PTPN2-203ENST00000353319 TOPAZ1Q8N9V7 1692 aa13.89□□□□□ -0.19
PTPN2-203ENST00000353319 COL3A1P02461 1466 aaPredicted RBP13.89□□□□□ -0.19
PTPN2-203ENST00000353319 IRX6P78412 446 aaPredicted RBP13.89□□□□□ -0.19
PTPN2-203ENST00000353319 SLFN5Q08AF3 891 aa13.89□□□□□ -0.19
PTPN2-203ENST00000353319 DUSP27Q5VZP5 1158 aa13.89□□□□□ -0.19
PTPN2-203ENST00000353319 RNF39Q9H2S5 420 aa13.89□□□□□ -0.19
PTPN2-203ENST00000353319 AATKQ6ZMQ8 1374 aa13.88□□□□□ -0.19
PTPN2-203ENST00000353319 CCDC27Q2M243 656 aa13.87□□□□□ -0.19
PTPN2-203ENST00000353319 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.87□□□□□ -0.191e-6■□□□□ 10.9
PTPN2-203ENST00000353319 NCKAP5LQ9HCH0 1330 aa13.87□□□□□ -0.19
PTPN2-203ENST00000353319 ITSN1Q15811 1721 aa13.87□□□□□ -0.19
PTPN2-203ENST00000353319 CHD2O14647 1828 aaKnown RBP13.85□□□□□ -0.19
PTPN2-203ENST00000353319 IQSEC2Q5JU85 1478 aa13.85□□□□□ -0.19
PTPN2-203ENST00000353319 E9PSI1 815 aa13.85□□□□□ -0.19
PTPN2-203ENST00000353319 KCNA6P17658 529 aa13.85□□□□□ -0.19
PTPN2-203ENST00000353319 RRP1P56182 461 aaKnown RBP13.85□□□□□ -0.19
PTPN2-203ENST00000353319 POLKQ9UBT6 870 aa13.85□□□□□ -0.19
PTPN2-203ENST00000353319 ANKARQ7Z5J8 1434 aa13.85□□□□□ -0.19
PTPN2-203ENST00000353319 ACEP12821 1306 aa13.85□□□□□ -0.19
PTPN2-203ENST00000353319 DIAPH1O60610 1272 aaKnown RBP13.85□□□□□ -0.19
PTPN2-203ENST00000353319 U2AF1L5P0DN76 240 aaPredicted RBP13.85□□□□□ -0.19
PTPN2-203ENST00000353319 U2AF1Q01081 240 aaKnown RBP eCLIP13.85□□□□□ -0.19
PTPN2-203ENST00000353319 WWC1Q8IX03 1113 aa13.85□□□□□ -0.19
PTPN2-203ENST00000353319 TCP11L2Q8N4U5 519 aa13.85□□□□□ -0.19
PTPN2-203ENST00000353319 SSH2Q76I76 1423 aa13.84□□□□□ -0.19
PTPN2-203ENST00000353319 TTC21BQ7Z4L5 1316 aa13.84□□□□□ -0.19
PTPN2-203ENST00000353319 NME9Q86XW9 330 aa13.84□□□□□ -0.19
PTPN2-203ENST00000353319 WDR63Q8IWG1 891 aa13.84□□□□□ -0.19
PTPN2-203ENST00000353319 COG3Q96JB2 828 aa13.84□□□□□ -0.19
PTPN2-203ENST00000353319 PNNQ9H307 717 aaKnown RBP13.84□□□□□ -0.19
PTPN2-203ENST00000353319 USP6P35125 1406 aa13.83□□□□□ -0.2
PTPN2-203ENST00000353319 PLEKHF1Q96S99 279 aa13.83□□□□□ -0.2
PTPN2-203ENST00000353319 NRKQ7Z2Y5 1582 aa13.83□□□□□ -0.2
PTPN2-203ENST00000353319 MAP2P11137 1827 aaKnown RBP13.82□□□□□ -0.2
PTPN2-203ENST00000353319 NKTRP30414 1462 aaKnown RBP13.82□□□□□ -0.2
PTPN2-203ENST00000353319 NPHP4O75161 1426 aaPredicted RBP13.82□□□□□ -0.2
PTPN2-203ENST00000353319 TTC21AQ8NDW8 1320 aa13.81□□□□□ -0.2
PTPN2-203ENST00000353319 FCHSD2O94868 740 aa13.8□□□□□ -0.2
PTPN2-203ENST00000353319 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
PTPN2-203ENST00000353319 CDK12Q9NYV4 1490 aaPredicted RBP13.8□□□□□ -0.2
PTPN2-203ENST00000353319 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
PTPN2-203ENST00000353319 ZRANB1Q9UGI0 708 aa13.8□□□□□ -0.2
PTPN2-203ENST00000353319 OVOS2A0A0J9YW53 1432 aa13.79□□□□□ -0.2
PTPN2-203ENST00000353319 OVOS2Q6IE36 1432 aa13.79□□□□□ -0.2
PTPN2-203ENST00000353319 USP31Q70CQ4 1352 aa13.79□□□□□ -0.2
PTPN2-203ENST00000353319 U2SURPO15042 1029 aaKnown RBP13.79□□□□□ -0.2
PTPN2-203ENST00000353319 FMN2Q9NZ56 1722 aa13.79□□□□□ -0.2
PTPN2-203ENST00000353319 IL13P35225 146 aa13.78□□□□□ -0.2
PTPN2-203ENST00000353319 NUTM2FA1L443 756 aa13.77□□□□□ -0.21
PTPN2-203ENST00000353319 TMPOP42166 694 aaKnown RBP13.77□□□□□ -0.21
PTPN2-203ENST00000353319 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
PTPN2-203ENST00000353319 FBLN1P23142 703 aa13.76□□□□□ -0.21
PTPN2-203ENST00000353319 EMILIN1Q9Y6C2 1016 aa13.76□□□□□ -0.21
PTPN2-203ENST00000353319 NALCNQ8IZF0 1738 aa13.76□□□□□ -0.21
PTPN2-203ENST00000353319 NGDNQ8NEJ9 315 aaKnown RBP13.75□□□□□ -0.21
PTPN2-203ENST00000353319 RSPH6AQ9H0K4 717 aa13.75□□□□□ -0.21
PTPN2-203ENST00000353319 RRP7AQ9Y3A4 280 aaKnown RBP13.75□□□□□ -0.21
PTPN2-203ENST00000353319 MAPK8IP3Q9UPT6 1336 aa13.75□□□□□ -0.21
PTPN2-203ENST00000353319 NWD1Q149M9 1564 aa13.75□□□□□ -0.21
PTPN2-203ENST00000353319 NEUROD2Q15784 382 aa13.74□□□□□ -0.21
PTPN2-203ENST00000353319 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.74□□□□□ -0.21
PTPN2-203ENST00000353319 PMFBP1Q8TBY8 1022 aa13.74□□□□□ -0.21
PTPN2-203ENST00000353319 ADGRL3Q9HAR2 1447 aa13.74□□□□□ -0.21
PTPN2-203ENST00000353319 IL16Q14005 1332 aa13.74□□□□□ -0.21
PTPN2-203ENST00000353319 PPM1GO15355 546 aaPredicted RBP13.74□□□□□ -0.21
PTPN2-203ENST00000353319 B4GALNT3Q6L9W6 998 aa13.74□□□□□ -0.21
PTPN2-203ENST00000353319 MYH16Q9H6N6 1097 aa13.73□□□□□ -0.21
PTPN2-203ENST00000353319 TRIM35Q9UPQ4 493 aa13.73□□□□□ -0.21
PTPN2-203ENST00000353319 RRS1Q15050 365 aaKnown RBP13.72□□□□□ -0.21
PTPN2-203ENST00000353319 EXOC6Q8TAG9 804 aa13.72□□□□□ -0.21
PTPN2-203ENST00000353319 USP54Q70EL1 1684 aa13.71□□□□□ -0.21
PTPN2-203ENST00000353319 LRRC7Q96NW7 1537 aa13.71□□□□□ -0.21
PTPN2-203ENST00000353319 NEFMP07197 916 aa13.71□□□□□ -0.21
PTPN2-203ENST00000353319 C1QBPQ07021 282 aaKnown RBP13.71□□□□□ -0.21
PTPN2-203ENST00000353319 CCDC136Q96JN2 1154 aa13.71□□□□□ -0.21
PTPN2-203ENST00000353319 PLIN1O60240 522 aa13.7□□□□□ -0.22
PTPN2-203ENST00000353319 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
PTPN2-203ENST00000353319 PRKAR2BP31323 418 aa13.7□□□□□ -0.22
PTPN2-203ENST00000353319 RIPK4P57078 832 aa13.7□□□□□ -0.22
PTPN2-203ENST00000353319 PHF8Q9UPP1 1060 aa13.7□□□□□ -0.22
PTPN2-203ENST00000353319 TSHZ2Q9NRE2 1034 aa13.69□□□□□ -0.22
PTPN2-203ENST00000353319 KIF24Q5T7B8 1368 aa13.69□□□□□ -0.22
PTPN2-203ENST00000353319 NFE2L2Q16236 605 aa13.69□□□□□ -0.22
PTPN2-203ENST00000353319 PIK3C2AO00443 1686 aa13.68□□□□□ -0.22
PTPN2-203ENST00000353319 EIF4A2Q14240 407 aaKnown RBP13.68□□□□□ -0.22
PTPN2-203ENST00000353319 NCOA3Q9Y6Q9 1424 aa13.67□□□□□ -0.22
PTPN2-203ENST00000353319 PDE3AQ14432 1141 aa13.67□□□□□ -0.22
PTPN2-203ENST00000353319 PHACTR3Q96KR7 559 aa13.67□□□□□ -0.22
PTPN2-203ENST00000353319 CRBNQ96SW2 442 aa13.67□□□□□ -0.22
PTPN2-203ENST00000353319 SBNO1A3KN83 1393 aa13.67□□□□□ -0.22
PTPN2-203ENST00000353319 PEAK1Q9H792 1746 aa13.66□□□□□ -0.22
PTPN2-203ENST00000353319 BCAR3O75815 825 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms