RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ERICH2A1L162 156 aa19.32■□□□□ 0.68
PTPN11-201ENST00000351677 GPRASP1Q5JY77 1395 aa19.32■□□□□ 0.68
PTPN11-201ENST00000351677 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.32■□□□□ 0.68
PTPN11-201ENST00000351677 MRE11P49959 708 aa19.32■□□□□ 0.68
PTPN11-201ENST00000351677 CCDC73Q6ZRK6 1079 aa19.32■□□□□ 0.68
PTPN11-201ENST00000351677 FAM43AQ8N2R8 423 aa19.32■□□□□ 0.68
PTPN11-201ENST00000351677 RRS1Q15050 365 aaKnown RBP19.32■□□□□ 0.68
PTPN11-201ENST00000351677 DNAJC2Q99543 621 aaKnown RBP19.32■□□□□ 0.68
PTPN11-201ENST00000351677 DHX16O60231 1041 aaKnown RBP19.31■□□□□ 0.68
PTPN11-201ENST00000351677 FAM13BQ9NYF5 915 aa19.31■□□□□ 0.68
PTPN11-201ENST00000351677 PLEKHO1Q53GL0 409 aaPredicted RBP19.31■□□□□ 0.68
PTPN11-201ENST00000351677 KDM4AO75164 1064 aa19.31■□□□□ 0.68
PTPN11-201ENST00000351677 TPM2P07951 284 aa19.31■□□□□ 0.68
PTPN11-201ENST00000351677 ARHGEF11O15085 1522 aa19.31■□□□□ 0.68
PTPN11-201ENST00000351677 HDGFL1Q5TGJ6 251 aa19.31■□□□□ 0.68
PTPN11-201ENST00000351677 TNNT3P45378 269 aaPredicted RBP19.3■□□□□ 0.68
PTPN11-201ENST00000351677 PCMTD1Q96MG8 357 aaPredicted RBP19.3■□□□□ 0.68
PTPN11-201ENST00000351677 ANO8Q9HCE9 1232 aaPredicted RBP19.3■□□□□ 0.68
PTPN11-201ENST00000351677 PSMA5P28066 241 aa19.3■□□□□ 0.68
PTPN11-201ENST00000351677 PRPF40AO75400 957 aaKnown RBP19.3■□□□□ 0.68
PTPN11-201ENST00000351677 RABEP1Q15276 862 aa19.29■□□□□ 0.68
PTPN11-201ENST00000351677 HOMER1Q86YM7 354 aa19.29■□□□□ 0.68
PTPN11-201ENST00000351677 WWC1Q8IX03 1113 aa19.29■□□□□ 0.68
PTPN11-201ENST00000351677 SLC52A1Q9NWF4 448 aa19.29■□□□□ 0.68
PTPN11-201ENST00000351677 NSD3Q9BZ95 1437 aa19.29■□□□□ 0.68
PTPN11-201ENST00000351677 FYB1O15117 783 aa19.29■□□□□ 0.68
PTPN11-201ENST00000351677 SLFN5Q08AF3 891 aa19.29■□□□□ 0.68
PTPN11-201ENST00000351677 RTEL1-TNFRSF6BF6WH68 1400 aa19.29■□□□□ 0.68
PTPN11-201ENST00000351677 PTPN23Q9H3S7 1636 aa19.29■□□□□ 0.68
PTPN11-201ENST00000351677 ANKRD30BQ9BXX2 1392 aa19.28■□□□□ 0.68
PTPN11-201ENST00000351677 CEP89Q96ST8 783 aa19.28■□□□□ 0.68
PTPN11-201ENST00000351677 ZNF692Q9BU19 519 aaPredicted RBP19.28■□□□□ 0.68
PTPN11-201ENST00000351677 HOOK1Q9UJC3 728 aaKnown RBP19.28■□□□□ 0.68
PTPN11-201ENST00000351677 BRPF3Q9ULD4 1205 aa19.28■□□□□ 0.68
PTPN11-201ENST00000351677 MAP4K4O95819 1239 aaPredicted RBP19.27■□□□□ 0.68
PTPN11-201ENST00000351677 CT47B1P0C2W7 299 aaPredicted RBP19.27■□□□□ 0.67
PTPN11-201ENST00000351677 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.27■□□□□ 0.67
PTPN11-201ENST00000351677 CHD1LQ86WJ1 897 aa19.27■□□□□ 0.67
PTPN11-201ENST00000351677 FAM177BA6PVY3 158 aa19.26■□□□□ 0.67
PTPN11-201ENST00000351677 SAFBQ15424 915 aaKnown RBP eCLIP19.26■□□□□ 0.67
PTPN11-201ENST00000351677 IFT57Q9NWB7 429 aa19.26■□□□□ 0.67
PTPN11-201ENST00000351677 KIAA0586Q9BVV6 1533 aa19.26■□□□□ 0.67
PTPN11-201ENST00000351677 CAMSAP2Q08AD1 1489 aa19.26■□□□□ 0.67
PTPN11-201ENST00000351677 IQGAP2Q13576 1575 aa19.26■□□□□ 0.67
PTPN11-201ENST00000351677 TRIM34Q9BYJ4 488 aa19.26■□□□□ 0.67
PTPN11-201ENST00000351677 ABCA10Q8WWZ4 1543 aa19.26■□□□□ 0.67
PTPN11-201ENST00000351677 CCT4P50991 539 aaKnown RBP19.26■□□□□ 0.67
PTPN11-201ENST00000351677 BCL11BQ9C0K0 894 aaPredicted RBP19.26■□□□□ 0.67
PTPN11-201ENST00000351677 ABCC5O15440 1437 aa19.25■□□□□ 0.67
PTPN11-201ENST00000351677 SLC26A8Q96RN1 970 aa19.25■□□□□ 0.67
PTPN11-201ENST00000351677 LRRCC1Q9C099 1032 aa19.25■□□□□ 0.67
PTPN11-201ENST00000351677 SKAP1Q86WV1 359 aa19.25■□□□□ 0.67
PTPN11-201ENST00000351677 ANKRD20A12PQ8NF67 263 aa19.24■□□□□ 0.67
PTPN11-201ENST00000351677 SIL1Q9H173 461 aa19.24■□□□□ 0.67
PTPN11-201ENST00000351677 TMPOP42166 694 aaKnown RBP19.24■□□□□ 0.67
PTPN11-201ENST00000351677 C20orf194Q5TEA3 1177 aa19.23■□□□□ 0.67
PTPN11-201ENST00000351677 CCDC47Q96A33 483 aaKnown RBP19.23■□□□□ 0.67
PTPN11-201ENST00000351677 RPGRIP1LQ68CZ1 1315 aa19.23■□□□□ 0.67
PTPN11-201ENST00000351677 PROSER2Q86WR7 435 aaPredicted RBP19.23■□□□□ 0.67
PTPN11-201ENST00000351677 VSIG10Q8N0Z9 540 aa19.23■□□□□ 0.67
PTPN11-201ENST00000351677 SDF4Q9BRK5 362 aa19.23■□□□□ 0.67
PTPN11-201ENST00000351677 FIBPO43427 364 aa19.23■□□□□ 0.67
PTPN11-201ENST00000351677 MCM2P49736 904 aa19.23■□□□□ 0.67
PTPN11-201ENST00000351677 TMEM57Q8N5G2 664 aa19.23■□□□□ 0.67
PTPN11-201ENST00000351677 CCDC141Q6ZP82 1450 aa19.22■□□□□ 0.67
PTPN11-201ENST00000351677 THUMPD2Q9BTF0 503 aaKnown RBP19.22■□□□□ 0.67
PTPN11-201ENST00000351677 ZNF530Q6P9A1 599 aaPredicted RBP19.22■□□□□ 0.67
PTPN11-201ENST00000351677 MAGI1Q96QZ7 1491 aaPredicted RBP19.22■□□□□ 0.67
PTPN11-201ENST00000351677 ATAD2Q6PL18 1390 aa19.22■□□□□ 0.67
PTPN11-201ENST00000351677 IPO7O95373 1038 aaKnown RBP19.22■□□□□ 0.67
PTPN11-201ENST00000351677 PLB1Q6P1J6 1458 aa19.22■□□□□ 0.67
PTPN11-201ENST00000351677 ERC1Q8IUD2 1116 aa19.22■□□□□ 0.67
PTPN11-201ENST00000351677 SRCIN1Q9C0H9 1055 aa19.22■□□□□ 0.67
PTPN11-201ENST00000351677 FCHSD2O94868 740 aa19.21■□□□□ 0.67
PTPN11-201ENST00000351677 RBM42Q9BTD8 480 aaKnown RBP19.21■□□□□ 0.67
PTPN11-201ENST00000351677 R3HCC1Q9Y3T6 440 aaKnown RBP19.21■□□□□ 0.67
PTPN11-201ENST00000351677 CCDC39Q9UFE4 941 aa19.21■□□□□ 0.67
PTPN11-201ENST00000351677 K7ELQ4 463 aaPredicted RBP19.21■□□□□ 0.67
PTPN11-201ENST00000351677 MTMR7Q9Y216 660 aa19.21■□□□□ 0.67
PTPN11-201ENST00000351677 MBD3O95983 291 aa19.21■□□□□ 0.66
PTPN11-201ENST00000351677 RBM33Q96EV2 1170 aaKnown RBP19.21■□□□□ 0.66
PTPN11-201ENST00000351677 STRN4Q9NRL3 753 aa19.2■□□□□ 0.66
PTPN11-201ENST00000351677 HIP1O00291 1037 aa19.2■□□□□ 0.66
PTPN11-201ENST00000351677 TATP17735 454 aaPredicted RBP19.19■□□□□ 0.66
PTPN11-201ENST00000351677 MYL6BP14649 208 aa19.19■□□□□ 0.66
PTPN11-201ENST00000351677 CEBPZQ03701 1054 aaKnown RBP19.19■□□□□ 0.66
PTPN11-201ENST00000351677 NFE2L2Q16236 605 aa19.19■□□□□ 0.66
PTPN11-201ENST00000351677 TSPY26PQ9H489 355 aa19.19■□□□□ 0.66
PTPN11-201ENST00000351677 THEMISQ8N1K5 641 aaPredicted RBP19.18■□□□□ 0.66
PTPN11-201ENST00000351677 MIS18AQ9NYP9 233 aa19.18■□□□□ 0.66
PTPN11-201ENST00000351677 STK3Q13188 491 aa19.18■□□□□ 0.66
PTPN11-201ENST00000351677 TBC1D2BQ9UPU7 963 aa19.18■□□□□ 0.66
PTPN11-201ENST00000351677 KIF6Q6ZMV9 814 aa19.18■□□□□ 0.66
PTPN11-201ENST00000351677 CCDC70Q6NSX1 233 aa19.17■□□□□ 0.66
PTPN11-201ENST00000351677 WAPLQ7Z5K2 1190 aa19.17■□□□□ 0.66
PTPN11-201ENST00000351677 ATP2B1P20020 1258 aa19.17■□□□□ 0.66
PTPN11-201ENST00000351677 MEX3CQ5U5Q3 659 aaKnown RBP19.17■□□□□ 0.66
PTPN11-201ENST00000351677 IL1RAPL2Q9NP60 686 aa19.17■□□□□ 0.66
PTPN11-201ENST00000351677 TCEAL9Q9UHQ7 104 aa19.17■□□□□ 0.66
PTPN11-201ENST00000351677 ZNF771Q7L3S4 317 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms