RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 NLRP1Q9C000 1473 aa21.37■■□□□ 1.01
PDAP1-201ENST00000350498 TMPOP42166 694 aaKnown RBP21.37■■□□□ 1.01
PDAP1-201ENST00000350498 NSD2O96028 1365 aa21.37■■□□□ 1.01
PDAP1-201ENST00000350498 EXOSC9Q06265 439 aaKnown RBP21.36■■□□□ 1.01
PDAP1-201ENST00000350498 TXNDC2Q86VQ3 553 aa21.35■■□□□ 1.01
PDAP1-201ENST00000350498 USP35Q9P2H5 1018 aa21.35■■□□□ 1.01
PDAP1-201ENST00000350498 ARHGEF40Q8TER5 1519 aa21.35■■□□□ 1.01
PDAP1-201ENST00000350498 COL3A1P02461 1466 aaPredicted RBP21.35■■□□□ 1.01
PDAP1-201ENST00000350498 ATAD2Q6PL18 1390 aa21.35■■□□□ 1.01
PDAP1-201ENST00000350498 CCDC27Q2M243 656 aa21.34■■□□□ 1.01
PDAP1-201ENST00000350498 A2ML1A8K2U0 1454 aa21.34■■□□□ 1.01
PDAP1-201ENST00000350498 SEC24BO95487 1268 aa21.33■■□□□ 1.01
PDAP1-201ENST00000350498 HDGFL2Q7Z4V5 671 aaPredicted RBP21.33■■□□□ 1.01
PDAP1-201ENST00000350498 DAXXQ9UER7 740 aaPredicted RBP21.33■■□□□ 1.01
PDAP1-201ENST00000350498 RIMS2Q9UQ26 1411 aa21.32■■□□□ 1
PDAP1-201ENST00000350498 RIPK4P57078 832 aa21.32■■□□□ 1
PDAP1-201ENST00000350498 METP08581 1390 aa21.32■■□□□ 1
PDAP1-201ENST00000350498 HMOX1P09601 288 aa21.31■■□□□ 1
PDAP1-201ENST00000350498 DIAPH1O60610 1272 aaKnown RBP21.31■■□□□ 1
PDAP1-201ENST00000350498 MYH16Q9H6N6 1097 aa21.3■■□□□ 1
PDAP1-201ENST00000350498 THUMPD2Q9BTF0 503 aaKnown RBP21.3■■□□□ 1
PDAP1-201ENST00000350498 POLKQ9UBT6 870 aa21.3■■□□□ 1
PDAP1-201ENST00000350498 EMILIN1Q9Y6C2 1016 aa21.3■■□□□ 1
PDAP1-201ENST00000350498 NME9Q86XW9 330 aa21.29■■□□□ 1
PDAP1-201ENST00000350498 ADGRB2O60241 1585 aa21.29■■□□□ 1
PDAP1-201ENST00000350498 MAPK8IP3Q9UPT6 1336 aa21.29■■□□□ 1
PDAP1-201ENST00000350498 FRAT2O75474 233 aaPredicted RBP21.28■■□□□ 1
PDAP1-201ENST00000350498 SSH1Q8WYL5 1049 aa21.28■■□□□ 1
PDAP1-201ENST00000350498 PHACTR3Q96KR7 559 aa21.28■■□□□ 1
PDAP1-201ENST00000350498 NINLQ9Y2I6 1382 aa21.28■■□□□ 1
PDAP1-201ENST00000350498 NUTM2FA1L443 756 aa21.27■■□□□ 1
PDAP1-201ENST00000350498 BRPF3Q9ULD4 1205 aa21.27■■□□□ 1
PDAP1-201ENST00000350498 PLPPR3Q6T4P5 718 aa21.27■■□□□ 1
PDAP1-201ENST00000350498 SMC4Q9NTJ3 1288 aa21.27■■□□□ 1
PDAP1-201ENST00000350498 USP19O94966 1318 aa21.27■■□□□ 1
PDAP1-201ENST00000350498 PRKAR2BP31323 418 aa21.26■□□□□ 0.99
PDAP1-201ENST00000350498 GSE1Q14687 1217 aa21.24■□□□□ 0.99
PDAP1-201ENST00000350498 TRIM27P14373 513 aa21.24■□□□□ 0.99
PDAP1-201ENST00000350498 RRS1Q15050 365 aaKnown RBP21.24■□□□□ 0.99
PDAP1-201ENST00000350498 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
PDAP1-201ENST00000350498 PDZRN3Q9UPQ7 1066 aa21.23■□□□□ 0.99
PDAP1-201ENST00000350498 NOB1Q9ULX3 412 aaKnown RBP21.23■□□□□ 0.99
PDAP1-201ENST00000350498 SETD1AO15047 1707 aaKnown RBP21.23■□□□□ 0.99
PDAP1-201ENST00000350498 SPATA31D1Q6ZQQ2 1576 aa21.22■□□□□ 0.99
PDAP1-201ENST00000350498 WASLO00401 505 aaPredicted RBP21.22■□□□□ 0.99
PDAP1-201ENST00000350498 ZKSCAN2Q63HK3 967 aa21.22■□□□□ 0.99
PDAP1-201ENST00000350498 ANKRD26Q9UPS8 1709 aa21.22■□□□□ 0.99
PDAP1-201ENST00000350498 PNPLA6Q8IY17 1366 aa21.22■□□□□ 0.99
PDAP1-201ENST00000350498 MVPQ14764 893 aaKnown RBP21.22■□□□□ 0.99
PDAP1-201ENST00000350498 FTSJ3Q8IY81 847 aaKnown RBP21.22■□□□□ 0.99
PDAP1-201ENST00000350498 DZIP1LQ8IYY4 767 aaKnown RBP21.22■□□□□ 0.99
PDAP1-201ENST00000350498 RSPH6AQ9H0K4 717 aa21.21■□□□□ 0.99
PDAP1-201ENST00000350498 NRXN3Q9Y4C0 1643 aa21.21■□□□□ 0.99
PDAP1-201ENST00000350498 AGLP35573 1532 aa21.21■□□□□ 0.99
PDAP1-201ENST00000350498 NUDT16Q96DE0 195 aaKnown RBP21.2■□□□□ 0.98
PDAP1-201ENST00000350498 ESF1Q9H501 851 aaKnown RBP21.2■□□□□ 0.98
PDAP1-201ENST00000350498 MAP2P11137 1827 aaKnown RBP21.2■□□□□ 0.98
PDAP1-201ENST00000350498 KIF20BQ96Q89 1820 aa21.2■□□□□ 0.98
PDAP1-201ENST00000350498 PPIP5K1Q6PFW1 1433 aa21.2■□□□□ 0.98
PDAP1-201ENST00000350498 ELL2O00472 640 aaPredicted RBP21.2■□□□□ 0.98
PDAP1-201ENST00000350498 CEBPAP49715 358 aaPredicted RBP21.2■□□□□ 0.98
PDAP1-201ENST00000350498 ANO8Q9HCE9 1232 aaPredicted RBP21.19■□□□□ 0.98
PDAP1-201ENST00000350498 LRRC7Q96NW7 1537 aa21.19■□□□□ 0.98
PDAP1-201ENST00000350498 MED14O60244 1454 aa21.19■□□□□ 0.98
PDAP1-201ENST00000350498 ITPRIPQ8IWB1 547 aa21.18■□□□□ 0.98
PDAP1-201ENST00000350498 PRR36Q9H6K5 1346 aa21.17■□□□□ 0.98
PDAP1-201ENST00000350498 TMEM57Q8N5G2 664 aa21.17■□□□□ 0.98
PDAP1-201ENST00000350498 CPS1P31327 1500 aa21.16■□□□□ 0.98
PDAP1-201ENST00000350498 TSPYL6Q8N831 410 aa21.16■□□□□ 0.98
PDAP1-201ENST00000350498 PMFBP1Q8TBY8 1022 aa21.16■□□□□ 0.98
PDAP1-201ENST00000350498 SLKQ9H2G2 1235 aaPredicted RBP21.16■□□□□ 0.98
PDAP1-201ENST00000350498 PPP6R1Q9UPN7 881 aa21.16■□□□□ 0.98
PDAP1-201ENST00000350498 FAM83GA6ND36 823 aa21.15■□□□□ 0.98
PDAP1-201ENST00000350498 FCHSD2O94868 740 aa21.15■□□□□ 0.98
PDAP1-201ENST00000350498 REREQ9P2R6 1566 aa21.15■□□□□ 0.98
PDAP1-201ENST00000350498 DCTN1Q14203 1278 aa21.15■□□□□ 0.98
PDAP1-201ENST00000350498 ATF7IPQ6VMQ6 1270 aa21.14■□□□□ 0.98
PDAP1-201ENST00000350498 IL13P35225 146 aa21.14■□□□□ 0.97
PDAP1-201ENST00000350498 CPSF1Q10570 1443 aaKnown RBP21.14■□□□□ 0.97
PDAP1-201ENST00000350498 SOX12O15370 315 aa21.13■□□□□ 0.97
PDAP1-201ENST00000350498 DLC1Q96QB1 1528 aa21.13■□□□□ 0.97
PDAP1-201ENST00000350498 LTKP29376 864 aa21.13■□□□□ 0.97
PDAP1-201ENST00000350498 KIF13AQ9H1H9 1805 aa21.12■□□□□ 0.97
PDAP1-201ENST00000350498 NCBP3Q53F19 620 aaKnown RBP21.12■□□□□ 0.97
PDAP1-201ENST00000350498 SLC26A8Q96RN1 970 aa21.12■□□□□ 0.97
PDAP1-201ENST00000350498 FAM135BQ49AJ0 1406 aa21.12■□□□□ 0.97
PDAP1-201ENST00000350498 RWDD1Q9H446 243 aaPredicted RBP21.12■□□□□ 0.97
PDAP1-201ENST00000350498 ROBO2Q9HCK4 1378 aa21.12■□□□□ 0.97
PDAP1-201ENST00000350498 ATP7BP35670 1465 aa21.11■□□□□ 0.97
PDAP1-201ENST00000350498 CCDC61Q9Y6R9 512 aa21.11■□□□□ 0.97
PDAP1-201ENST00000350498 VIRMAQ69YN4 1812 aaKnown RBP21.11■□□□□ 0.97
PDAP1-201ENST00000350498 AEBP1Q8IUX7 1158 aa21.1■□□□□ 0.97
PDAP1-201ENST00000350498 NFE2L2Q16236 605 aa21.09■□□□□ 0.97
PDAP1-201ENST00000350498 IL16Q14005 1332 aa21.08■□□□□ 0.97
PDAP1-201ENST00000350498 SPRYD3Q8NCJ5 442 aa21.08■□□□□ 0.97
PDAP1-201ENST00000350498 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.08■□□□□ 0.97
PDAP1-201ENST00000350498 COG3Q96JB2 828 aa21.08■□□□□ 0.97
PDAP1-201ENST00000350498 C1orf115Q9H7X2 142 aa21.08■□□□□ 0.97
PDAP1-201ENST00000350498 TNRQ92752 1358 aa21.08■□□□□ 0.97
PDAP1-201ENST00000350498 EDC4Q6P2E9 1401 aaKnown RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms