RNA–Protein interactions for RNA: ENST00000350033.7

COPS7B-201, Transcript of COP9 signalosome subunit 7B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7B, Length 2,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-201ENST00000350033 NPM2Q86SE8 214 aaKnown RBP17.37■□□□□ 0.37
COPS7B-201ENST00000350033 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
COPS7B-201ENST00000350033 FRAT1Q92837 279 aaPredicted RBP17.37■□□□□ 0.37
COPS7B-201ENST00000350033 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
COPS7B-201ENST00000350033 TNNQ9UQP3 1299 aa17.37■□□□□ 0.37
COPS7B-201ENST00000350033 PDE4AP27815 886 aa17.36■□□□□ 0.37
COPS7B-201ENST00000350033 NGEFQ8N5V2 710 aa17.36■□□□□ 0.37
COPS7B-201ENST00000350033 PODXL2Q9NZ53 605 aa17.36■□□□□ 0.37
COPS7B-201ENST00000350033 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
COPS7B-201ENST00000350033 COL3A1P02461 1466 aaPredicted RBP17.35■□□□□ 0.37
COPS7B-201ENST00000350033 CANXP27824 592 aaKnown RBP17.34■□□□□ 0.37
COPS7B-201ENST00000350033 ANKRD26Q9UPS8 1709 aa17.34■□□□□ 0.37
COPS7B-201ENST00000350033 PLEKHF1Q96S99 279 aa17.34■□□□□ 0.37
COPS7B-201ENST00000350033 TNRQ92752 1358 aa17.33■□□□□ 0.37
COPS7B-201ENST00000350033 KIF20BQ96Q89 1820 aa17.33■□□□□ 0.37
COPS7B-201ENST00000350033 TSR2Q969E8 191 aaKnown RBP17.33■□□□□ 0.36
COPS7B-201ENST00000350033 COG6Q9Y2V7 657 aa17.33■□□□□ 0.36
COPS7B-201ENST00000350033 DLC1Q96QB1 1528 aa17.33■□□□□ 0.36
COPS7B-201ENST00000350033 WASLO00401 505 aaPredicted RBP17.32■□□□□ 0.36
COPS7B-201ENST00000350033 RARSP54136 660 aaKnown RBP17.32■□□□□ 0.36
COPS7B-201ENST00000350033 WDR63Q8IWG1 891 aa17.32■□□□□ 0.36
COPS7B-201ENST00000350033 BRPF3Q9ULD4 1205 aa17.31■□□□□ 0.36
COPS7B-201ENST00000350033 NME9Q86XW9 330 aa17.31■□□□□ 0.36
COPS7B-201ENST00000350033 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.31■□□□□ 0.36
COPS7B-201ENST00000350033 BACH2Q9BYV9 841 aa17.31■□□□□ 0.36
COPS7B-201ENST00000350033 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
COPS7B-201ENST00000350033 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
COPS7B-201ENST00000350033 NEFMP07197 916 aa17.3■□□□□ 0.36
COPS7B-201ENST00000350033 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
COPS7B-201ENST00000350033 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
COPS7B-201ENST00000350033 ADGRB2O60241 1585 aa17.3■□□□□ 0.36
COPS7B-201ENST00000350033 DIAPH1O60610 1272 aaKnown RBP17.29■□□□□ 0.36
COPS7B-201ENST00000350033 CCDC27Q2M243 656 aa17.29■□□□□ 0.36
COPS7B-201ENST00000350033 CENPQQ7L2Z9 268 aaPredicted RBP17.29■□□□□ 0.36
COPS7B-201ENST00000350033 TRIM35Q9UPQ4 493 aa17.29■□□□□ 0.36
COPS7B-201ENST00000350033 IGHDP01880 384 aa17.29■□□□□ 0.36
COPS7B-201ENST00000350033 RLBP1P12271 317 aa17.29■□□□□ 0.36
COPS7B-201ENST00000350033 LTKP29376 864 aa17.29■□□□□ 0.36
COPS7B-201ENST00000350033 NUDT16Q96DE0 195 aaKnown RBP17.29■□□□□ 0.36
COPS7B-201ENST00000350033 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
COPS7B-201ENST00000350033 MED14O60244 1454 aa17.28■□□□□ 0.36
COPS7B-201ENST00000350033 EMILIN1Q9Y6C2 1016 aa17.28■□□□□ 0.36
COPS7B-201ENST00000350033 CLUAP1Q96AJ1 413 aa17.28■□□□□ 0.36
COPS7B-201ENST00000350033 UBR1Q8IWV7 1749 aa17.28■□□□□ 0.36
COPS7B-201ENST00000350033 RGS3P49796 1198 aa17.27■□□□□ 0.36
COPS7B-201ENST00000350033 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
COPS7B-201ENST00000350033 TMEM2Q9UHN6 1383 aa17.27■□□□□ 0.36
COPS7B-201ENST00000350033 MAP2P11137 1827 aaKnown RBP17.27■□□□□ 0.36
COPS7B-201ENST00000350033 MS4A1P11836 297 aa17.27■□□□□ 0.36
COPS7B-201ENST00000350033 ROBO2Q9HCK4 1378 aa17.26■□□□□ 0.35
COPS7B-201ENST00000350033 HMOX1P09601 288 aa17.26■□□□□ 0.35
COPS7B-201ENST00000350033 RIPK4P57078 832 aa17.26■□□□□ 0.35
COPS7B-201ENST00000350033 SLC26A8Q96RN1 970 aa17.26■□□□□ 0.35
COPS7B-201ENST00000350033 ZMYND15Q9H091 742 aa17.26■□□□□ 0.35
COPS7B-201ENST00000350033 ATP7BP35670 1465 aa17.26■□□□□ 0.35
COPS7B-201ENST00000350033 PRR36Q9H6K5 1346 aa17.25■□□□□ 0.35
COPS7B-201ENST00000350033 PNPLA6Q8IY17 1366 aa17.25■□□□□ 0.35
COPS7B-201ENST00000350033 MYH16Q9H6N6 1097 aa17.25■□□□□ 0.35
COPS7B-201ENST00000350033 EXOSC9Q06265 439 aaKnown RBP17.24■□□□□ 0.35
COPS7B-201ENST00000350033 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
COPS7B-201ENST00000350033 RRS1Q15050 365 aaKnown RBP17.24■□□□□ 0.35
COPS7B-201ENST00000350033 CPS1P31327 1500 aa17.24■□□□□ 0.35
COPS7B-201ENST00000350033 CPSF1Q10570 1443 aaKnown RBP17.24■□□□□ 0.35
COPS7B-201ENST00000350033 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
COPS7B-201ENST00000350033 AEBP2Q6ZN18 517 aaPredicted RBP17.23■□□□□ 0.35
COPS7B-201ENST00000350033 ADAMTS13Q76LX8 1427 aa17.23■□□□□ 0.35
COPS7B-201ENST00000350033 HDGFP51858 240 aaKnown RBP17.22■□□□□ 0.35
COPS7B-201ENST00000350033 PHACTR3Q96KR7 559 aa17.22■□□□□ 0.35
COPS7B-201ENST00000350033 FAM43AQ8N2R8 423 aa17.22■□□□□ 0.35
COPS7B-201ENST00000350033 LRRC7Q96NW7 1537 aa17.22■□□□□ 0.35
COPS7B-201ENST00000350033 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
COPS7B-201ENST00000350033 EDC4Q6P2E9 1401 aaKnown RBP17.21■□□□□ 0.35
COPS7B-201ENST00000350033 GSE1Q14687 1217 aa17.21■□□□□ 0.35
COPS7B-201ENST00000350033 THUMPD2Q9BTF0 503 aaKnown RBP17.2■□□□□ 0.34
COPS7B-201ENST00000350033 KNDC1Q76NI1 1749 aa17.2■□□□□ 0.34
COPS7B-201ENST00000350033 FAM135BQ49AJ0 1406 aa17.2■□□□□ 0.34
COPS7B-201ENST00000350033 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.19■□□□□ 0.34
COPS7B-201ENST00000350033 LAS1LQ9Y4W2 734 aaKnown RBP17.19■□□□□ 0.34
COPS7B-201ENST00000350033 PCDHB15Q9Y5E8 787 aa17.19■□□□□ 0.34
COPS7B-201ENST00000350033 TECPR2O15040 1411 aa17.19■□□□□ 0.34
COPS7B-201ENST00000350033 VSIG10Q8N0Z9 540 aa17.19■□□□□ 0.34
COPS7B-201ENST00000350033 CDC42BPGQ6DT37 1551 aa17.18■□□□□ 0.34
COPS7B-201ENST00000350033 SSH1Q8WYL5 1049 aa17.18■□□□□ 0.34
COPS7B-201ENST00000350033 SMC4Q9NTJ3 1288 aa17.18■□□□□ 0.34
COPS7B-201ENST00000350033 PTPRUQ92729 1446 aa17.18■□□□□ 0.34
COPS7B-201ENST00000350033 FCHSD2O94868 740 aa17.17■□□□□ 0.34
COPS7B-201ENST00000350033 COG3Q96JB2 828 aa17.17■□□□□ 0.34
COPS7B-201ENST00000350033 IL13P35225 146 aa17.16■□□□□ 0.34
COPS7B-201ENST00000350033 C8orf34Q49A92 452 aa17.16■□□□□ 0.34
COPS7B-201ENST00000350033 MON2Q7Z3U7 1717 aa17.16■□□□□ 0.34
COPS7B-201ENST00000350033 SOX12O15370 315 aa17.16■□□□□ 0.34
COPS7B-201ENST00000350033 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
COPS7B-201ENST00000350033 SIRT1Q96EB6 747 aa17.15■□□□□ 0.34
COPS7B-201ENST00000350033 C3P01024 1663 aa17.15■□□□□ 0.34
COPS7B-201ENST00000350033 ITSN1Q15811 1721 aa17.15■□□□□ 0.34
COPS7B-201ENST00000350033 PLEKHG1Q9ULL1 1385 aa17.15■□□□□ 0.34
COPS7B-201ENST00000350033 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
COPS7B-201ENST00000350033 ACEP12821 1306 aa17.14■□□□□ 0.33
COPS7B-201ENST00000350033 ZKSCAN2Q63HK3 967 aa17.14■□□□□ 0.33
COPS7B-201ENST00000350033 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms